Btha000998.2
Basic Information
- Insect
- Bhutanitis thaidina
- Gene Symbol
- -
- Assembly
- GCA_029286595.1
- Location
- JAGSMS010000002.1:5895795-5907012[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0068 0.44 11.3 0.8 3 23 477 498 476 498 0.95 2 23 0.18 12 6.8 0.3 1 22 882 903 882 903 0.95 3 23 5.9 3.8e+02 2.1 0.3 1 22 945 966 945 968 0.82 4 23 0.0043 0.28 11.9 0.4 3 21 979 997 977 998 0.94 5 23 0.31 20 6.1 0.1 3 23 1007 1028 1005 1028 0.90 6 23 0.0052 0.34 11.6 0.1 3 23 1049 1070 1047 1070 0.96 7 23 0.0015 0.099 13.3 2.1 1 23 1076 1099 1076 1099 0.95 8 23 0.11 7.1 7.5 0.0 1 23 1125 1148 1125 1148 0.90 9 23 0.0048 0.31 11.8 3.5 1 23 1153 1175 1153 1175 0.97 10 23 0.11 7.2 7.5 0.1 1 23 1181 1204 1181 1204 0.95 11 23 0.002 0.13 12.9 1.3 1 23 1217 1239 1217 1239 0.97 12 23 0.00016 0.01 16.5 1.8 1 23 1288 1311 1288 1311 0.97 13 23 0.005 0.32 11.7 1.5 1 23 1372 1395 1372 1395 0.96 14 23 0.00096 0.062 14.0 2.1 2 23 1419 1441 1418 1441 0.95 15 23 0.076 4.9 8.0 0.1 2 23 1447 1469 1446 1469 0.93 16 23 0.0087 0.56 11.0 0.2 1 21 1513 1533 1513 1534 0.95 17 23 0.00034 0.022 15.4 0.9 1 23 1544 1566 1544 1566 0.93 18 23 6.9e-05 0.0045 17.6 0.4 2 23 1656 1678 1656 1678 0.93 19 23 1.6e-07 1e-05 25.9 1.1 3 23 1685 1705 1684 1705 0.98 20 23 0.043 2.8 8.8 0.7 1 23 1724 1746 1724 1747 0.93 21 23 0.12 8.1 7.3 0.0 1 23 1768 1790 1768 1790 0.98 22 23 0.0024 0.16 12.7 0.3 1 23 1796 1819 1796 1819 0.96 23 23 0.00022 0.014 16.0 0.4 1 23 1827 1850 1827 1850 0.96
Sequence Information
- Coding Sequence
- atgaGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATATTTCCTACCACCAGTTCGAGTGACTCGGAACCTCCTGTCTTCGTATCAAAAATTAAGGATTGTGTGTCCGTACAGaTAAACGAAGATGACGACCTGCCAACTAATGTGTGCAAAAAATGCATGGACAATGTTAATAACTGGCACATTTTTAAGGCTGTATGTGAAAGGACACAAAACAAACTACAGTCtctgattaataaaaatgatggCAGCCAACTAGAAGAGgtgaaaataaaaagtgaacCTTTGTCTGATGAGGCTTATGATGATGGAGTGCTAATTGATGGCACTTACCCTGATCATGAGAATGATTCCACTTCCAGTAAAGTGCAACCAGAAGGTCCTCCTATCTTGGCTTCGCTGGGTCTCACACCGAGGAGTGATAAGAATTATGTAGATCCCCGGATGGACTGGCACAGGGTACATGCAATATTGGATATGATTCAAGATGATGAGGTCATTGACTCTCTACAGTCCACTGAAGAATGCGATGTATTACATCACTCTGATCATGATTCTGATTCTGAAACTGAATTATTACATGATATCAATGAGAAGTACATTGATAGTAAAAATGGTTACTTGTGTAAAAATAGAAAGTTAATTGCAAAGAATCCTTTGTTATCAACAACTACaagtattaatgttaaaatgagAGAAGCAATGAAACTTAGAAAACGCCACAAAACCAAGGATAAACATTGTCCATTACCAAAAAATGCCTGGCAGCTCCTATTCACTGATGATTTACTTGAACTTATAGTTACATCTACTAATGAAAAAATCTCAAAGTATCAGAAAGGCTCCTCTGCTGCCACAAACATGCGTGAAATAAAAACCCTTGTTGGAATATTATATTTCCATGGTATAATGAGGCCAACAAATCAGAAATGCAGTGACCTCTGGCATGATGAGTATGgaattatttgtattcaaaatgCAATGAAGTATAACCGTTTTAAATTCCTCCTTCAGAACTTGAGTTTTGACCCTGATAGTGGTGACAATTTAATGCAATGTGATGTAATGAAATGCATCCGTAAAGCCTTTGAAATTTTTGCATTGAATTGCAGAACAGCTTTTGACATTAAAAATGTGGCTGTTATAGATGAAGTTCTTTTACCTGTTTATGGGCCTTGCCCATTCAGATACAATATAGAAAAGAAGCCTTTGAAATGTGGTATCAAAATGGGCATGGAGAGTGAAAAAGATGAAGAGGAAGACGAAGATGACGAGATGAATGATCCCAGTCAACATTACCCAAACGTGCCCAATATACCTGAAGTGTCCATCACTGTCATGCGTCCCACCGGGGAGACATTACACGCCCGTCAAGGAATTCAACAACTTGCTTCGAAAGATTGTCTCGTATGTGGTCGATCTTATAGATATTCGCATAATGCTAGACGTCATGAGCTCATGGCACATAGTTTTGATCGATacacgaataaaataaacatcaaaaattCACATACACATTTGCAACCAAAACTCAGACCCAACCCATTTAATCCCAAGGCTAGGCTTATGCCTAACCCAATAAGCCATAAAATGCAGCTTGTTCCGAAAGGGATTTCTGGAAAAAATATGCAGCAAAAGGTTGTTGCTCCACCTAAGCCTATACCAATCAAAACACCAAAGGCCTCTCAAAATAATTTGCCATATCCGCTTCGTATCAAAGCTCTAAAGGACTTgcaaataaagaagaaagaaccTCAAATTTTGAAAACTTTATTAACTACAAAACCTGAAGTTTTAGTATCCGAGCCAGAAATTATTAACTCTGGTCCAGAAAGCCCAGAAACGTTGATATCAGAGCCTGAAATCGCTTCATTCCAAGTAGAAACTATTCTTTCAGAACCCGATACTTATAATCATCTGCAAGACGACGAAGAAGTAGATGGTGATATGCAAAATAATCAGAATCAAAATTATGATACCGTTGATATGGATTCTGATAATGAGATTGAAATTGCTCGCCAACAAGAAGGAGGAGGTGACCAGCATGACCGTCACCAAGTGGAAAATGGAGCAGAAGATGCAAACGAAATGGAGAATGAGGATGAAAATAACATAGAAAGGAATCAAAGTGACAATGACAATGATCAGATGGATGATAATGTTGATAGTCAAGATGAATTGCAGATTATTAATGATACTGAAGGAAGAGAAGATGACGAAGCCAAAGAAGGAGAAGAGGCGAATGAAGAACGGGAGGACGAACACCCCGAAATTAACCACGAAGAAAATGAAGAGGATGATGATGAGCTACCGCCGATGAGTATAGCCCCAGTGGTTGAAATCAATGAAGAATTGCAAACGAATTCATACAACAGCGAGCTAAACGAAGAAGAAGAGCTTGATGAAACAGCAGATCCAAATGATACTGCAGACGATGTGAAAGAACTCGACCCTGACAAGTTGTATGTAACAAAAACTCAAAAAGATTTTATTCACAAATATCGTGATGTCATTGAACAGATCAATACTAAAAGATGTCTTTGTTGTGATAGAGAACACCCTCGACGTAAAGCTGTTATACAACATTTACAGAAAAACGGACACAAAGTCCCAAAACATACATGTTACAATTGTGTTATTACTTTCGGTCATATTGGCGCTTTACTCAGCCATATGCGGTCCAACACCTGCACGGATTTatggaaaattatttacaatgaaaatgGAATAACCGATGATTTAGTTTTAGAAGACGAACCCAAAGATACTAAAGTtcaatataaagatatatttaatgcTAGGTCATATGCATGCAAACTGTGTCCAGCAAAATTCCAGctgaaacaatttattatgaaacatgTATTGGATGTACACGAGGATGGCCAATCGCGGGTACAACTTGCTTGTGTGCACTGCGGGTCCAGATTTAAAGATAAGGCAATGTGGAAGAAACATATCCGTAATGGGGAATGCACAGTTTACATTGCATGTGATTTATGCACAGAAAGATTTATCAACATGCAAGATTTTAATAATCACGCGTTGGCTGTTCATGCCGGAAGTTTTGACCAATCTGATAATCAGAACAAATGTGTCGACGGAAGACCAACTGATTGTCCGATTTGTGGAAAGAAGAATAGTAGCTATCCCAACTTAGTCAAACATTTGAAGATAATACACAGCGAGGAAAAACCACATTATTGCCAGCACTGTGATTCCAAATTCGAACAAGCTGCTGATctcaataaacatatttatgtagaGCATTCTGATAGAACCTTGGGTATGCAAAGTCATGAGCCCGATATGTCACTTGTTAAAGAAGAAGCAGAAGAATATCATTATTCATGCACGGAATGTAATGCCATATTCGAAACCGTCGATGCTTGGACAGATCATCAGGTGGCTGAACATAATCAAGTTGCTCATCATTGTGATCAATGCGATAAAAAGTTTTTGAGACCATCTGAACTGGCTGAGCACAAAAATACTCATTTAAGAGTGAAATTTTATCCATGCAGCTTATGCGCTAATTCTTACAGCACGCCTCAAAAACTTTCAGATCATGTTCAACAAGCTCATCCAGGAGCAGGAGCTTACACCCCGACAGATTCAGAATTTTTCTGCGATATTTGTATTAGGTCTTTCAAAAGTCGTCAGGCCTATTCGAACCATATGCGTATACATGCTAAAGTACCTACTACTAATAGGAAACCTGGGGATCCAAAAGGGTTTGCTCCACAAATCGTTGGTAAACCAATTAGATCTTTTTCAATGGTACAACCTGGTTTTGTATCATTCAAACCTAATTGTAATGTCCCCAATGCACCATATTCATGCGATATCTGTGGAAAAGGTTTTATGCACAAGAAAAATATCTGGAAGCATAAGAAAGTTTTACATGCTGATCTCGTTGGTGATAGAAATGATAGTGAAGAGAATACGATGCAAGCATCCACTGAAGAGGATGAATACAATTTAGATGAAAATGGCGCTATATTGTCAACTCCacaatttaatagttttaattttacaaatctGACAAATAACTTACAACAACAGACTTCTCAAGAAGCTATGGTCTATTCTTGTGAGCTCTGCTATAAACAGTTTCCACTTAAAACAAGTTTATGGAAACATAAACGGGCTAAACATGGAATTATCAACGCCAGTGCTACTGGTAATTCTGATTCTCAGATGATGGGAGGTGAGGGCGGCAGATCTAGTTGCACGATTTGTAAAATCACGTTTTCAGATAAAAAATCGTACTACCGTCATAGGAAGAATGTTCACAAATCCTCAACTCAAATGTGTAAAATTTGCGGTAAGCCTCTCAATTCGACATTAGAATTATATGAGCATCTCAAAGCTGCACATGCTAGAGAGTTATTGGGATATAACGCGAATCAAAGTTCTAGTAAGCCAACGGAAATGGTCCAGGAATTGGACGTAGAGTATGAAGGAGATCAAGATTCAATGGATCCTACTGTTGAATATCAAGCTCGATATCCATGTGACACGTGTGGAAAACAGTTTGTAGGTTTGTTAGCATTGCAAAATCATCAATGTATAAATCAAGTACAATCATCGCCACAGTCTTTCGATTGCGAGATCTGTCACAAGAGTTATTCTTCTATTTCTGCTTTAAAGAGCCACCGCGGCTGGCATTTACGTTCGCCTGACGGTAAAGCAGCTGCAAACAATACAGGCCTCTGGATGCCTCAACATAAAGTAACTAGTAAAGTTAGTAAGCATGAAATCGTCGATCCGTCACAATTAGCACGAGTGACCCATTCGACACCAGTAAGTGTAGCCAAAAGGAGATTGCCACCGGAAGTAGAAGTGACTGTTGTTAATCCGAACAAGAAAATGCGTTCTGACGATTCCGTAGAATTGGAACAGCAGAACAATTCATCCACTGGAGCGGAAGATAGATACTGTACAATATGTGATAAAGAATTTACTAAACGTGCGGCTTTTCAACGTCACATGGACGAGGTCCATCAGCCCAACTCTGTATTCTGCCCGGTTTGTGACAAGAGTTTTACGCGGAAGTCTACACTGATTGTTCATATGAAGAAACATTATGACACTGGAGAAGGTAGTTCTAATGCAGCTGATCAGATGGAGGATGATGTTCACGCTTGTGACCTTTGTGGCGCGCAATATGATACTGAAAACGCTCTCAGAGCCCACCGAGTAAGGCACCATGGTGATGATTCAGGAGGGGAGTCCGAAGATGATGGTACTAGTGTTCCTCCTCCAGGTGAATTCACTTGCGCACAATGTGGGGACGGTGTGGCCACACCTCGCGACCTTATCGCCCACCGCTCTATGCATGCCACTCCAACAAAATTCTATTGCAATATTTGCCAAGTTTTCTTCGCTAGAGCTATCGACCTCTCGTCCCACACACGAGCAAGACATGCAGACAATGAAAAGGTGTTTTTCCCATGTGCTATGTGTGATCGCTTTTATATGAACAAGAAGAGCTTACAGCGGCACATTGAAATGGCTCACTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELLPIFPTTSSSDSEPPVFVSKIKDCVSVQINEDDDLPTNVCKKCMDNVNNWHIFKAVCERTQNKLQSLINKNDGSQLEEVKIKSEPLSDEAYDDGVLIDGTYPDHENDSTSSKVQPEGPPILASLGLTPRSDKNYVDPRMDWHRVHAILDMIQDDEVIDSLQSTEECDVLHHSDHDSDSETELLHDINEKYIDSKNGYLCKNRKLIAKNPLLSTTTSINVKMREAMKLRKRHKTKDKHCPLPKNAWQLLFTDDLLELIVTSTNEKISKYQKGSSAATNMREIKTLVGILYFHGIMRPTNQKCSDLWHDEYGIICIQNAMKYNRFKFLLQNLSFDPDSGDNLMQCDVMKCIRKAFEIFALNCRTAFDIKNVAVIDEVLLPVYGPCPFRYNIEKKPLKCGIKMGMESEKDEEEDEDDEMNDPSQHYPNVPNIPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELMAHSFDRYTNKINIKNSHTHLQPKLRPNPFNPKARLMPNPISHKMQLVPKGISGKNMQQKVVAPPKPIPIKTPKASQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPDTYNHLQDDEEVDGDMQNNQNQNYDTVDMDSDNEIEIARQQEGGGDQHDRHQVENGAEDANEMENEDENNIERNQSDNDNDQMDDNVDSQDELQIINDTEGREDDEAKEGEEANEEREDEHPEINHEENEEDDDELPPMSIAPVVEINEELQTNSYNSELNEEEELDETADPNDTADDVKELDPDKLYVTKTQKDFIHKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDTKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVQLACVHCGSRFKDKAMWKKHIRNGECTVYIACDLCTERFINMQDFNNHALAVHAGSFDQSDNQNKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHSEEKPHYCQHCDSKFEQAADLNKHIYVEHSDRTLGMQSHEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSLCANSYSTPQKLSDHVQQAHPGAGAYTPTDSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFAPQIVGKPIRSFSMVQPGFVSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLVGDRNDSEENTMQASTEEDEYNLDENGAILSTPQFNSFNFTNLTNNLQQQTSQEAMVYSCELCYKQFPLKTSLWKHKRAKHGIINASATGNSDSQMMGGEGGRSSCTICKITFSDKKSYYRHRKNVHKSSTQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQSSSKPTEMVQELDVEYEGDQDSMDPTVEYQARYPCDTCGKQFVGLLALQNHQCINQVQSSPQSFDCEICHKSYSSISALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEIVDPSQLARVTHSTPVSVAKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNNSSTGAEDRYCTICDKEFTKRAAFQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYDTGEGSSNAADQMEDDVHACDLCGAQYDTENALRAHRVRHHGDDSGGESEDDGTSVPPPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFYCNICQVFFARAIDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -