Basic Information

Gene Symbol
-
Assembly
GCA_029286595.1
Location
JAGSMS010000016.1:9171880-9174777[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.00014 0.12 12.7 0.1 4 17 8 21 6 23 0.94
2 2 7.3e-05 0.062 13.6 0.3 22 43 43 63 34 66 0.90

Sequence Information

Coding Sequence
ATGCCATTGAACGCAGTGGGATGGACCACAGAAGAGGACGAGAGACTCGTTGAATTAGTGCAACCACAGACatgtttgtataattattttgatccCTCCAGGAAGAATATTCTGGCTCGTGAATCTACATGGCAAGAAATAGCTCAGGCTTTATCTAAACCAGttgAAGAATGCAAAAAGCGTTGGAGAGGCCTCCGCGATGGCTTCATGAGGAGCATGCGCATGGGTAccatacataaaacaaaagccAATATCTTTGAAAAGCTTAAGTTCTTAGCTGGTACTTCTCTGGACAGTACAGAAGAAGTTGGGGAGATATCAATGAAAATGAATAATGACCAGATACAAGAAGAGACAGTTGTAGGAACCGTAGGAACAGAACAAGTTATTATAGACAAccaagaatattatgaaATCACACTTGTTGATGGTCCACAAGAGCCTCAAGTCAAACAGAAtgctttcataaaaatattaccaaagCTAGAACAAAGTTCAGGAGAACCACCTAAGAAAATAAGCAGAAGAGGTTCAGGACGGAAGAAGACAATACCTGTACCTAAAAATATACCACCAGTTAAAATACTGCCAAAACCAGTTACTATGAATGGACCAAAGACATATGTGCGATATGTGGAAGACCCAAAAACACCTGAACAAAGGTCTCAAGTTATAGATATGCTGATAGAAAAAGTTCTTAAAGAAAACACCAATGAAATTGATGTATTCTTCAGAAGTATGGCAGCAAGTGTTAAAAAGTTACAACCAAACTTAATTCCAAAAGTAAAAATGGAAGTTTGCAATGTTATAGCCAAATATGAAATGCAGAGTTTTGACAAGAGCTTCCAAGATATTTAA
Protein Sequence
MPLNAVGWTTEEDERLVELVQPQTCLYNYFDPSRKNILARESTWQEIAQALSKPVEECKKRWRGLRDGFMRSMRMGTIHKTKANIFEKLKFLAGTSLDSTEEVGEISMKMNNDQIQEETVVGTVGTEQVIIDNQEYYEITLVDGPQEPQVKQNAFIKILPKLEQSSGEPPKKISRRGSGRKKTIPVPKNIPPVKILPKPVTMNGPKTYVRYVEDPKTPEQRSQVIDMLIEKVLKENTNEIDVFFRSMAASVKKLQPNLIPKVKMEVCNVIAKYEMQSFDKSFQDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01115652;
90% Identity
-
80% Identity
-