Basic Information

Gene Symbol
-
Assembly
GCA_029286595.1
Location
JAGSMS010000026.1:5918593-5920950[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.66 5.6e+02 0.9 0.0 4 18 158 172 156 174 0.92
2 5 4.5e-08 3.8e-05 23.9 0.1 1 45 263 309 263 310 0.94
3 5 2.4e-10 2e-07 31.2 0.3 2 45 317 364 316 365 0.94
4 5 1.4e-07 0.00012 22.3 0.0 1 43 369 411 369 413 0.97
5 5 3.4e-06 0.0029 17.9 0.0 3 42 421 462 419 466 0.89

Sequence Information

Coding Sequence
atgagtATGATCCAATTTGAATTTGAAGATAGTGATTGTGATAGCGAAACTGAGTTGCAAGATTTGCAACAGCTTAACGCAGTTCTCGTCTCTGATGAGCCTTCAACTAGTGCAACTAATTCACACATTGCCTCTCCTACGGCGAGTATCAGTTCTTCATCAAAAGAGATACATGAACTTTCTAAAATAGAAACAGCATTAGCTCTAAACAAGTTAACTGATGAGAAGCTACGTAGGTTGGAAAAAATCTTGGTAGGACGATTGAatgaatgtaaacaaaaactgaACGATATTCTGGAATCAAATAAGGGGGCTAAGGCTTTTTCCAAACAAGAATCATTTAGATATGTTAACTGCGGTAAACCCTATTTTAAAGATAAAGCAAACTTTACTCCTCCATATAATGAAGATACCAATACTATGAAAAAATCAGGAATGTATGACTTTTCTTCTGTGTCTTCAGTTCCTGGTTGGACAGTTAAAGACAAAAgtcagtttattaatttaatacataaaatgtctTTAGATGTTCAGAAGAAAGAAATAGAGTTAAAAATATCAGAATTGAAGCGTGAGAAGAAGAACAAACCACATAAAAAAGCAGATAATAGAATATCTGTTTTAAGAAAAGAACTtgaaaatgtcaataaaaaagCATTGAAAGACATAGCTTTACCTATTGAAGAGGAATATGATTGGGAATATATAACTAACAAATTGAACCGACGTCATTCTGCTCAAGAGTACCAAACTCTatggaaattattcttacatcctagcattaataaaaatagttggAGTAAAACTGAGCATAGttctttacaaaaaattacttacaaaaatcAATACCAAGACTGGGATCACATAGCTGCGGAACTGGGAACCAATCGCACAGGCTaccaatgttttgtttattttcgcaCTAATATGAGCAACACATTTACAGGACAAAAATGGACAAAAGAAGAAGAGGAATATCTTAAAAGATTAATTGACTACTACAGAGAAGACAATTATATTCCCTGGGGCAAAGTTGCAACTTCAATGGGAAACCGAACaaagatacaaatatataataaatataatagacttATTGAACACAGGAAAGGTAGGTTCCTCTCCGAAGAGGATGCTGTCATTCTTACTTGTGTTGATCATTTTGGCACAGACTTTAGGAGAATGATAAGTTATCTACCTGGACGTTCAATAGCTCAATTGCGCATGAGATACCAAATTTTGGCCAAAAAGAGAATATCAACTGTATGGACAGTAGAggaagataataaattaattaagttgcTAGCAAACCAAGATACTCCTAGTGTTTATTCTAGTCTCACAAAATATTTCCCTGGAAAAGACAGAATGCATATAAGAAGCAGACATTTAACACTAATAAAATGGATGAAAACACACCCAAACATGGATATTTCATTAGCACCACGTCGTGCAGCCCGTCGATTAGGTCATGGTCAAGCATTAGATAACTTAAACAAAGCTATTGAAAACTTAAAATCACGAATTAAATCAGAAGTTGAAGAACGTAAATGTAAAAAGGTTACAAAGACCTCATCAGAAGATGTAATTGAAGATGCTATAATGGCTACATTATTAAATCAGGCCACAAAAGAGGAAGAGGCTAAAAGAACGCAACAATGGCAAGATGAACAACTAACATTAAGAGATGATATTGTTATTTCATCACAGTCTTTAAATGCTACTAATTTAAGAAAACTTCTCATTTTGTTaagaaTAGGCATCGGTATTGCTATTCCAGAATTTAAATCAGACCTAGTAAATGATGAAATAGATTTAGAAGAATCTACAAATAGTAAAGAAGAAATTGACATCACAGTAATAAACATAGATAACCTTGTTCGTGATCCAGCATCCTAA
Protein Sequence
MSMIQFEFEDSDCDSETELQDLQQLNAVLVSDEPSTSATNSHIASPTASISSSSKEIHELSKIETALALNKLTDEKLRRLEKILVGRLNECKQKLNDILESNKGAKAFSKQESFRYVNCGKPYFKDKANFTPPYNEDTNTMKKSGMYDFSSVSSVPGWTVKDKSQFINLIHKMSLDVQKKEIELKISELKREKKNKPHKKADNRISVLRKELENVNKKALKDIALPIEEEYDWEYITNKLNRRHSAQEYQTLWKLFLHPSINKNSWSKTEHSSLQKITYKNQYQDWDHIAAELGTNRTGYQCFVYFRTNMSNTFTGQKWTKEEEEYLKRLIDYYREDNYIPWGKVATSMGNRTKIQIYNKYNRLIEHRKGRFLSEEDAVILTCVDHFGTDFRRMISYLPGRSIAQLRMRYQILAKKRISTVWTVEEDNKLIKLLANQDTPSVYSSLTKYFPGKDRMHIRSRHLTLIKWMKTHPNMDISLAPRRAARRLGHGQALDNLNKAIENLKSRIKSEVEERKCKKVTKTSSEDVIEDAIMATLLNQATKEEEAKRTQQWQDEQLTLRDDIVISSQSLNATNLRKLLILLRIGIGIAIPEFKSDLVNDEIDLEESTNSKEEIDITVINIDNLVRDPAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-