Btha017279.1
Basic Information
- Insect
- Bhutanitis thaidina
- Gene Symbol
- -
- Assembly
- GCA_029286595.1
- Location
- JAGSMS010000040.1:1414184-1414597[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-08 0.00017 21.4 0.0 5 40 1 35 1 40 0.88 2 2 0.83 1.4e+03 -0.8 0.0 24 31 65 72 57 77 0.73
Sequence Information
- Coding Sequence
- ATGGACAACGCTATTCGTGACGTAAATAAGGGGATGAGCAAAAAGATGGCAGCAAAAACACACCATATACCCCGATCAACTCTCATATTGGCTCTGAGAAGAGGATTTAACAAGAAACCACTGGGGAGGAAGCCGGTATTCTCAGCAGAACAAGAAAAAGAGCTTGCAGAGAACATAATGTCTCTTTCGAAGAGATTCTACGGTGTTAACCgcactagaataaaaaaatgcgCATATGACTACGCAACACATAACAACATTAAGTATCCATTTTCAAACGAGAAAAAACAAGCCGGCGATGATTGGATCGAGGGCTTCTTGAGGCGTCATACAAATCTCGTGGAGGAAACCAGAAGCCACGAGCATGAGCCGCATAAATGGATTCAACAAGAAAGAGGTGACAGTGTTCTATGA
- Protein Sequence
- MDNAIRDVNKGMSKKMAAKTHHIPRSTLILALRRGFNKKPLGRKPVFSAEQEKELAENIMSLSKRFYGVNRTRIKKCAYDYATHNNIKYPFSNEKKQAGDDWIEGFLRRHTNLVEETRSHEHEPHKWIQQERGDSVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -