Btha017342.1
Basic Information
- Insect
- Bhutanitis thaidina
- Gene Symbol
- -
- Assembly
- GCA_029286595.1
- Location
- JAGSMS010000040.1:1833658-1843293[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-07 0.00065 19.5 0.1 4 35 187 219 184 227 0.89 2 2 6.2e-11 1e-07 31.7 0.0 4 36 311 344 310 352 0.87
Sequence Information
- Coding Sequence
- ATGGATTTGTCAAATACCGAGACTATGTTTTATTCTGGAAGATGTAAATGCTGCCTCAACGAGGGTGATTTAAAGAATATGTGGATGCCTTACACCTCGAAAGGAGAAACCGAAATATATGGAATGATGTTGACAGAATGTTTCGTTTTGCCGtgGCAACAACCAGAGTCACATATGGAGATGATATGTAATACATGCATCTCCCGGCTACGAGATTCGCTCGCTTTTAGAAGAGAAGTGCTGGTCAGTGAAGAAGTCCTGCGAGAGCATCAAAGTGAAATATTCGTTTGTACTACAGTTAAAGTGGAGCATGATTTGGATCAGGAGAAGGAAACCGACTTTGAAGATGAGTACTTGGAGATTGATGAGGGCTTGACCGTTAAAGATCTTTCGAATGAAgaatatgcaataaataaagaGGAACAGAATGAAGAACCATTATtgcatgAACAGTCACTAATACCGAAGAAATCTATCGCAGAAAAGCGTAAAAGAAAATGTCCGGAGAAGCTTCCGAAAGAAGACCGGAACAGAACATACAAGCAGTACACTTCTAAGGATCTGAGGAAGGCCGTAGAGGCAGTCGCGAATGACGAGATGTCAGGCAGGGCAGCCTCCAAGGTGTATAGGGTGCCCAGAAAGGTTCTGTCGGCGAAGCTACAGAGTGgcgttattaaaaaagaagAATTATCTAATACGCTGAAAGATGAACGTGTTCGGGATCAGGACGACGAAAGCTATTTTGATGCTATAGAGTACTTGGAGATTGATGTTGGCATGAGTAAAGTTGAATCAAAtgaagaaaacactttaaatgaatcATCACAGAAACCCGAGGAAGGTACCGAAGAACTGCCCAGAAAAAGAAAATGGCCGAAAAAGCTTTCAAGACAGGACAGGAACAAAACATACAAGCAGTATACTGTGAAGGATATGAAGTTGGCCATCGAAGCTGTTGTTAATAACAACATGTCTTGCAATGCAGCCGCCGAGATTTATGGAGTGCCCAGGAAGACTCTGGCAGTAAAGCTCCAGACTAGGAAGGAGGAAGTGGACGACGAAGCAGAAAAATTTGTTGACCAAGAGAAGCATTACAAACTGGTGGAGGAAATCAAAACCATACTTACTTACACAAATGCGATACCGTACAAAGTGAGGACGTCGAGGTACTACTGTGCCTACTGCACCACAGACGGACCGCAATTTGAAGACCCCGATGACTTGAGGGCACACACGAAGACCGAACATGTCGATGATCGAACCGAGGGCGTAGAGCACATCATGAGACCGCAGTGGATGAATGAAGTAGTAAAACTGGATATATATAATCTTCATTGTACAGTTTGTAGCACAATCCTTCCGGCATGGAACAACATGTTCAGTCACCTCGAGGAAGTTCATAATGTTATACTAGAGGAGGCCTACAACAGAGCCATACCTTACACCCTCACAAGGGAGTTGAACTGCGCTTTGTGCGGTGATTCGTTTTTAACATACAACAACTTAGACGGACACATGAACACTCATTATAGCAGTTACATCTGCTATGAATGCGGTGACACATTCCTCTCGGCGAGCCGTCTCAACAAACACACAGAAGTGCACAATACGGGGAAACATCCTTGCGAGGTTTGCGGGAAAGTGTTCAAGTTGGAGAAGTACAAAAGAAAGCATGTTGATTTTGTCCACGGACGGAAAGAGAAAGTTAAATGTTTGTACTGTACGGAGAAATTCTACGGACTACTTCAGAGGCATCAACACGTTTTGGAGCAGCATAAGGAGAAAGTTAAGATTATGACGTGCGAGATGTGTGGAAAGACATTCGACTGGAAGCCATATTACGCAGCGCATTTGAAAAGGAGACACAGTATGGAGAAGAATTTCAAATGCAAGGAATGCGATATGACTTTCCTTATGAGGTACGAGCTGAAGAGCCACGAAGTGACGCATACGAATGAGAAAAACTATGTTTGTGAAATATGCAATGAAAGGTTTAAGAGAAGGATCAGTTTGATCAGACATTGTCAAACGCATCATGATCTCCAACCTCCGAAGGCTTCTAACAAGACAAATAAATCTGTGTCGGAAgcgtaa
- Protein Sequence
- MDLSNTETMFYSGRCKCCLNEGDLKNMWMPYTSKGETEIYGMMLTECFVLPWQQPESHMEMICNTCISRLRDSLAFRREVLVSEEVLREHQSEIFVCTTVKVEHDLDQEKETDFEDEYLEIDEGLTVKDLSNEEYAINKEEQNEEPLLHEQSLIPKKSIAEKRKRKCPEKLPKEDRNRTYKQYTSKDLRKAVEAVANDEMSGRAASKVYRVPRKVLSAKLQSGVIKKEELSNTLKDERVRDQDDESYFDAIEYLEIDVGMSKVESNEENTLNESSQKPEEGTEELPRKRKWPKKLSRQDRNKTYKQYTVKDMKLAIEAVVNNNMSCNAAAEIYGVPRKTLAVKLQTRKEEVDDEAEKFVDQEKHYKLVEEIKTILTYTNAIPYKVRTSRYYCAYCTTDGPQFEDPDDLRAHTKTEHVDDRTEGVEHIMRPQWMNEVVKLDIYNLHCTVCSTILPAWNNMFSHLEEVHNVILEEAYNRAIPYTLTRELNCALCGDSFLTYNNLDGHMNTHYSSYICYECGDTFLSASRLNKHTEVHNTGKHPCEVCGKVFKLEKYKRKHVDFVHGRKEKVKCLYCTEKFYGLLQRHQHVLEQHKEKVKIMTCEMCGKTFDWKPYYAAHLKRRHSMEKNFKCKECDMTFLMRYELKSHEVTHTNEKNYVCEICNERFKRRISLIRHCQTHHDLQPPKASNKTNKSVSEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00204735;
- 90% Identity
- iTF_00204735;
- 80% Identity
- iTF_00204735;