Btha008071.1
Basic Information
- Insect
- Bhutanitis thaidina
- Gene Symbol
- retn
- Assembly
- GCA_029286595.1
- Location
- JAGSMS010000013.1:8519498-8533030[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-20 6.3e-17 61.9 0.0 15 89 159 231 147 231 0.95
Sequence Information
- Coding Sequence
- ATGTGCTGCTGGATGTCACCCCGTCTCTTCGGCCTATTTATGCTAATGCCCCATTGTGGCCAACGCCTCATTTGTTCCACCAACTATTGTCAAACAGTGTGCCCTTTGACTCCATTTGTTACCGTCTCCGCGGAGATCATAAACCACGCAACAGCATTCGATACTATCTACCACGATCCGCCGGTGTTCAGATGGGATTCGCGACCGCAGGACGCGTATTATCGCGAGCCGAAGCCACCGCAGTCGCGAATTTCATACGTTTCTAATAAATTGATACAAGGCGCGATTGGCTCTGGCGGCGATTTGGCATACGTCGTAAATTACGGTTTAACCGGACGAATTGAGTGTACTGTCGATGTGCACGTTAGCCGTGGGGCTGTGGGGAGCTTTGAGAATGGTGGGGTGATGCAAATAGCGCGGCCGGGCGGTCGAACGCACGCGCGTCGAATCGCGCGTTTTCCGCCGGTGCGCGGGGCACGCGGCACACCTATAAACCGGTTGCCAATAATGGCGAAGTCAGTGCTCGATCTGTACGAGCTTTACAATCTGGTGATAGCCCGCGGCGGGCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCTTAAGACTGCCGTCCTCGATCACGTCGGCTGCATTCACACTGCGCACACAGTACATGAAGTACTTATACGACTATGAGTGCGAGAAAAAGAACCTATCAACACGCAGCGAACTGGACGCCGCCATAGAGGGCAACAAGAGAGAGGGCCGTCGCGCCTCTGGCCAATACGACGCACAAGCGGCACTCGCTATGCCGTCGCTGAACCGCGGCGTGTCGCTGTCGATGCCGCTGGGGCAGCCGCTGACGTTGCCCCTGGGCGCCGTGCCCCGCCTGCCCATGCACGCCCCCCACCTGCACAACCACGACATCGAGTTCCGTGTGCGCGAGTACATGAAGATGATACAACAGCAGCGCGAGCTCTTAAGAAATGGGTCTGAGTCACCACCGGGCAGCGGCAATATGCTGTCGCCTCGCGAAGCGGCGCTGAGCGCCATTGACGTGTCGCGGCTAACCCTGTGGTCCCTctacaacaataacaacaacagCCCGCAGCCGGACCTCGAGCCGCAGCGCGAGGCTCTGAATCTCAGCGAGAGTCCGAACTCAAATGCGAGCGGCGGCAAAAGAGAAGCGTGCCGCTCGCCGCCGCCGCCGGCCAAGCGTCGCACGCCGCGCCCGCCCTCCCCCCGCGAGCCCTCGCCGCGACACTCGCTCGCCGCACACGTCCCGCACGCCGCGCACGCCGCTCACGTCACGCACGCCAATCACGCTGTGCACGCCAACCACGCGTCGCAACTCAATGGCAACGCGAACGGCGTCAACGGAGCCGCTTTCAAGATTACAACCAGAGGTGACGCGACTACCGGCGACCAACAACTCGTCGTCTCTATCGAGCTCAACGGAGTTACGTACGAAGGCGTTCTTTTCCCCTCACAAAACGGAAACGGACAGAACGGTCACAGGCAAAtggtttcttaa
- Protein Sequence
- MCCWMSPRLFGLFMLMPHCGQRLICSTNYCQTVCPLTPFVTVSAEIINHATAFDTIYHDPPVFRWDSRPQDAYYREPKPPQSRISYVSNKLIQGAIGSGGDLAYVVNYGLTGRIECTVDVHVSRGAVGSFENGGVMQIARPGGRTHARRIARFPPVRGARGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRGVSLSMPLGQPLTLPLGAVPRLPMHAPHLHNHDIEFRVREYMKMIQQQRELLRNGSESPPGSGNMLSPREAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSNASGGKREACRSPPPPAKRRTPRPPSPREPSPRHSLAAHVPHAAHAAHVTHANHAVHANHASQLNGNANGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -