Bmor030971.1
Basic Information
- Insect
- Beris morrisii
- Gene Symbol
- stc
- Assembly
- GCA_951812415.1
- Location
- OX638313.1:112214644-112217831[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 2.8 3.2e+04 -4.0 1.6 15 19 311 315 310 315 0.81 2 12 0.1 1.2e+03 0.6 0.2 4 10 344 350 343 352 0.93 3 12 0.00012 1.4 9.9 16.4 4 19 358 373 356 373 0.93 4 12 2.9e-05 0.34 11.9 11.2 3 19 411 427 409 427 0.91 5 12 4.1e-09 4.8e-05 24.2 14.4 1 19 467 485 467 485 0.98 6 12 3.3e-05 0.38 11.7 16.5 4 18 533 547 526 548 0.88 7 12 0.0077 90 4.2 8.4 1 11 588 598 588 599 0.96 8 12 1.7e-09 2e-05 25.4 13.6 1 18 615 632 615 633 0.97 9 12 3 3.5e+04 -15.4 19.3 4 18 670 689 662 690 0.76 10 12 2.1e-07 0.0025 18.7 9.5 1 18 726 747 726 748 0.92 11 12 4.6e-07 0.0053 17.7 11.8 1 18 758 776 758 777 0.90 12 12 0.92 1.1e+04 -2.5 0.1 8 12 793 797 790 797 0.85
Sequence Information
- Coding Sequence
- ATGGCCGGCTACACGCCGCCAAATCAGGACGATCGCAACGGAAGCGGCTACGTCGACTTCAATCAGTTCATCATGCAACACAATCTGGGCAACTCGTTCGGATCGCAGTTCAACGATTGTTACAATCAGCCGATCAACCAGCAGTTGCCTTATATGCCGAGCGCCGACTACAACCTATTTCAGCCCGAACGGCAGTCGTCGACAAGTTCATCCTTCGGGCAGCAGCAAGAGATTGCTGCCGCCTCGAATTTGGCGCCAACCGCTGCCGAATTTATTCCGCGCTTCAACAATATCAGCATATCAGAGAGTCAGCCGCACGTCGATTTCTCGTATTCGGCGGGCGACAATACGCCGGTGGAAACACGCGAACCTCGGAACTCGTACCGAAACCGAAATACCGGTGCGATAAGCAAACGGGCTAATCACGGCCGCAATCAGTACTACGACCGGCAACGGTACGAACCGAACAACAACAGCAACGGCAATCATTCGTCGTCCAATGGCCGTTACAGCAACCAGCGCACAGAGAACAACGGCAGTAGTGCGCGCAACAATCGACGACGTGATAACTGGCGCAATTACAAGGACATGGCGCCGTCGCCGCAGAAGAAGCACTCGGACGCCGCCGTCGCAATCACCGCCAGCCTAGACGACTCCCCGAAGCACTCGTACTCCGACCTGGAAAGTGGACGCGACACGGGCCATCGCAGCTCCTCGAAATCTTCCGAGTCGAATCTCGACTCGCAGAAATACTCGCAACGGGACAAGCTAATCCGCGAAATCGAGTCGCGAAAACTCGAGTGCCTTGTGTGCGTCGAACCGATAAAACCACACCAGGCGATTTGGTCCTGCTCCAACTGCTTTCACATTCTTCACTTGCTGTGCACAACAAAGTGGGCGGCCAGCTCAAAATCGACGGACGGCTGGCGATGCCCGGCGTGCCAGAACGTCACGAAAACCATCCCGCGCGACTACTACTGCTTCTGTGGCAAAGTGAAAAATCCGCTGTACAATCGCAGCGACATGGCACACAGTTGCGGCGAACCGTGCGGCCGTAAAGAATCCTGTCCGCATCCATGCACGCTTCTTTGTCATCCGGGACCATGCGCCCCGTGCCAGGCGATCGTGACGCGCGAATGCGGTTGCGCCAAAACAACAAAATCGATGCAGTGCTGCATCAAGGAGGAGCTTCAGTGCGACTCGAAATGCGAGAAGCTGCTTAATTGCGAGCTGCACGCGTGCGACGAGGACTGTCACAAGGGACGCTGTCCGAACTGCAAGCATAAAATCGATCAGCACTGCTATTGCACGAAAATTGATCGTCAGGTGCCGTGCACGCGAGAATCGAACGACAAGAAGCACTTCTCGTGCGGCAAGCCGTGCAACAAGCAGCTGATCTGCGGCAATCACAAATGCAAGGATAACTGCCACTCGGGCGACTGTAAGCCGTGCAAGCTAACGCCTGACATGGTCACTTCCTGCCCGTGCGGTAAGATGCCTGTTTCGACGGCCGAGCGTGAATCCTGTCTGGATCCGATCCCCGTTTGTAACGGAACTTGTGGTCGCACACTGAAATGCGGACCGCCCTCCTCGCCGCATCACTGCGCTAGCAAATGCCACACGGGCAATTGCCCGCCGTGCAACAAGCAAACGGCAGTTCGTTGTCGCTGCGGCAACATGGATCAGATGATCAAGTGCCGGCAGCTCGTGACACGGGCCGACGACGCTCGTTGCAAAAAACGCTGTACGAAGAAGCGAAGCTGCGGCAAACATAAATGCGCCCAGGAGTGCTGCATCGATATCGATCACATCTGCCTGATGCCGTGCAATCACACACTCTCGTGCGGCAAGCATAAGTGCGATCAGCCGTGTCATCGCGGCAATTGTGCCCCTTGCTATCGTAGCTCGTTCGACGAGCTGTACTGCGAATGTGGCGCGAACGTAATCTATCCGCCCGTACCTTGCGGAACGAAGCGCCCCGTTTGCACGAAACCGTGCACGCGACAACATTCGTGCGAGCATCCCGCTCAGCACCACTGCCACTCGAGCGCGACATGCCCGCCGTGCATCGTCCTAACAACGAAATTCTGTCACGGACGACACGAGCAACGTAAAACGATTCCGTGCAACCAGTCCACGTTCAGCTGCGGCCTGCCGTGCAACAAGGAGCTACCATGCGGCTCTCATAAATGCATCAGGTCGTGCCACGAAGGCATTTGCAAGGCGCCCTTTGAACCCTGCAAGCAAAGCTGCCAAACACTACGGCACAACTGCGGTCACAAATGCAACGCTCCGTGCCACGTCGGTGACTGTCCGGACACTGCCTGCCGCGAGAATGTGGAAGTAACTTGCGAATGCGGCAACCGAAAACAAATGCGAACGTGCCACGATTTTTCCAGCGAGTACCGGCGCATTGCTACCACCCTGCTAGCTTCGTCCATGCAGGAAGTGCAGCGCGGTAACACGGTTGAGCTGCGCGACATCATCGGCCCGATCAAGATGACAAACAACAAAACATTGGATTGCAACGACGAATGCAAAGTTCTCGAACGTAACCGTCGTCTTGCTATCGGCTTACAAATTCGCAATCCCGACTTACAATCGAAGCTACTCACTCGCTACTCGGACTTCATTCGCGGCTGGGCGAAAAAGGATCCAGTCCTCGTGAAAATGATCCACGATAAGCTGACCGAGCTGGTGAAATTGTCGAAGGAAAGCAAGCAACGATCACGTAGTCACTCGTTCCCAACGATGAACAAAGAAAAGCGACAACTGGTTCACGAAATGTGCGGAATGTTTGGAGTCGATTCGGTCGCGTACGATGCCGAACCGAATCGAAATGTGGTCGCGAGTGCGTACAAGGAGCGGTCTTGGCTACCGGCTATGAGCATTATGGAAATTATGCAACGCGAAAGCGGACAACGGCGCGTTCCGGTTCCCAATAACAACGCCTGGGGCCTGAAAAAATGA
- Protein Sequence
- MAGYTPPNQDDRNGSGYVDFNQFIMQHNLGNSFGSQFNDCYNQPINQQLPYMPSADYNLFQPERQSSTSSSFGQQQEIAAASNLAPTAAEFIPRFNNISISESQPHVDFSYSAGDNTPVETREPRNSYRNRNTGAISKRANHGRNQYYDRQRYEPNNNSNGNHSSSNGRYSNQRTENNGSSARNNRRRDNWRNYKDMAPSPQKKHSDAAVAITASLDDSPKHSYSDLESGRDTGHRSSSKSSESNLDSQKYSQRDKLIREIESRKLECLVCVEPIKPHQAIWSCSNCFHILHLLCTTKWAASSKSTDGWRCPACQNVTKTIPRDYYCFCGKVKNPLYNRSDMAHSCGEPCGRKESCPHPCTLLCHPGPCAPCQAIVTRECGCAKTTKSMQCCIKEELQCDSKCEKLLNCELHACDEDCHKGRCPNCKHKIDQHCYCTKIDRQVPCTRESNDKKHFSCGKPCNKQLICGNHKCKDNCHSGDCKPCKLTPDMVTSCPCGKMPVSTAERESCLDPIPVCNGTCGRTLKCGPPSSPHHCASKCHTGNCPPCNKQTAVRCRCGNMDQMIKCRQLVTRADDARCKKRCTKKRSCGKHKCAQECCIDIDHICLMPCNHTLSCGKHKCDQPCHRGNCAPCYRSSFDELYCECGANVIYPPVPCGTKRPVCTKPCTRQHSCEHPAQHHCHSSATCPPCIVLTTKFCHGRHEQRKTIPCNQSTFSCGLPCNKELPCGSHKCIRSCHEGICKAPFEPCKQSCQTLRHNCGHKCNAPCHVGDCPDTACRENVEVTCECGNRKQMRTCHDFSSEYRRIATTLLASSMQEVQRGNTVELRDIIGPIKMTNNKTLDCNDECKVLERNRRLAIGLQIRNPDLQSKLLTRYSDFIRGWAKKDPVLVKMIHDKLTELVKLSKESKQRSRSHSFPTMNKEKRQLVHEMCGMFGVDSVAYDAEPNRNVVASAYKERSWLPAMSIMEIMQRESGQRRVPVPNNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00203172;
- 90% Identity
- iTF_00203172;
- 80% Identity
- -