Basic Information

Insect: Beris morrisii
Gene Symbol: -
Assembly: GCA_951812415.1
Location: OX638313.1:109258585-109265142[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.78 94 4.7 2.3 1 23 49 72 49 72 0.92

2 14 0.027 3.3 9.3 0.2 1 23 75 98 75 98 0.97

3 14 0.00045 0.054 14.9 0.1 3 21 109 127 107 128 0.93

4 14 0.0019 0.23 12.9 0.3 1 23 136 158 136 158 0.98

5 14 3.2e-06 0.00039 21.6 3.0 1 23 164 186 164 186 0.97

6 14 5.7e-05 0.007 17.7 1.3 1 23 192 214 192 214 0.94

7 14 1.2 1.4e+02 4.1 2.1 1 21 220 240 220 241 0.95

8 14 0.024 3 9.4 0.2 1 23 476 499 476 499 0.92

9 14 4.6e-05 0.0056 18.0 2.3 2 23 518 539 517 539 0.97

10 14 0.00019 0.023 16.1 0.5 1 21 564 584 564 585 0.93

11 14 0.00057 0.07 14.5 2.1 1 23 593 615 593 615 0.97

12 14 0.00074 0.09 14.2 3.1 1 23 621 643 621 643 0.95

13 14 7.6e-05 0.0092 17.3 2.6 1 23 649 671 649 671 0.98

14 14 2.7 3.2e+02 3.0 1.2 5 22 680 697 677 697 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.78	94	4.7	2.3	1	23	49	72	49	72	0.92
2	14	0.027	3.3	9.3	0.2	1	23	75	98	75	98	0.97
3	14	0.00045	0.054	14.9	0.1	3	21	109	127	107	128	0.93
4	14	0.0019	0.23	12.9	0.3	1	23	136	158	136	158	0.98
5	14	3.2e-06	0.00039	21.6	3.0	1	23	164	186	164	186	0.97
6	14	5.7e-05	0.007	17.7	1.3	1	23	192	214	192	214	0.94
7	14	1.2	1.4e+02	4.1	2.1	1	21	220	240	220	241	0.95
8	14	0.024	3	9.4	0.2	1	23	476	499	476	499	0.92
9	14	4.6e-05	0.0056	18.0	2.3	2	23	518	539	517	539	0.97
10	14	0.00019	0.023	16.1	0.5	1	21	564	584	564	585	0.93
11	14	0.00057	0.07	14.5	2.1	1	23	593	615	593	615	0.97
12	14	0.00074	0.09	14.2	3.1	1	23	621	643	621	643	0.95
13	14	7.6e-05	0.0092	17.3	2.6	1	23	649	671	649	671	0.98
14	14	2.7	3.2e+02	3.0	1.2	5	22	680	697	677	697	0.91

Sequence Information

Coding Sequence: ATGTCAGTGGCAGTTGGACAAAACTGTGGGAGTAGTTCAGAGGAGTCGTCGTCATCGTCGTCACCATTGCTCAAGAAACGCAACTACAAGGAGGCGACCTCGCCCGCcggaaaaCATATGAGTCGACATCAACCGCCCGGTGGATATTTGTGTCGATACTGCGACGCCAGCCACTGTACGAAGGAAGCGCTTACGGAACATGTCCAGGAGAATCATGCGGTTTTTCGTTGTGCAATTTGCCAGAGCTACTTCGAGAAGATCGACGACTACACGGCTCACATCGAGACCGTGCACGAGGGCCGACAAACCATCTACGATCAGATCTGTGAAAGTTGCGGTCAGAAATTCCGAAGCCAATACGCACTCAACATCCATTTGCAGTCCAAGTGCGGCACGAAGAGATCCTTCAAGTGTGACGAGTGCGGCTCGAATTATATGAGCAAAACAACGTTGGCTGCTCACAAATTGATTCACACGGGCGAGAAGTTCTTCTGTTGCAGCTATTGCGGCAAGCGATTTATAAGTAACGGCCAACTGACGGTCCACGAACGGAAGCATACGAAGGAGAAGCCGTTTCAGTGCGAAGTGTGCAAGAAGTCGTTCTCGTATCGAGAAAGTTTGGTAACGCACAGTTCGTTGCATACCGGAATCAAACCGTATGTTTGCGAATGTTGCGGATCGACGTTCTCCTGTGTGGGAAATTTGCAGAAACATCGACGAGCTAGACCGTATAGTTGTGGTATGCCGCAGTACTGCCAGAGGTTGAAACGAGTCGTTCCTCGGTTGAGTACAAAATTGGCGAACAAACCGCAAATAAAGAAAGTTGTGAAAAGGTTGCCGGAAACAAGCAAAAATCTACAAATTAAAAACGAACAAGAAGTcgattatttgaaaaatgaagCGGATAGTGAGCAGGTAAGCGGGGATGACCAAGATACGATCGAACAGGACGATCAAGATCATGACGACAGCTACGAAAATGATAAGCTATCGACGGAAAGCGATGTAGAAATCGAATCCCCAGTGACTGTCGAAATACTCAACATCGAACCACTTAAAGAGGAGATTGACCGGGAAAACGTTCTGGATATGGACCAGATGGACGAACTCTTTATCCCAGATGATGGCAACGATGAACAGTCTCCGTACGATTCCAGCGCACAAGATCCCATCAGTGAATTTGAAGGAACAATTATTGAGGAAATTCCAACTGTTCGAAATACTGACGACCTGAAATTGACCGATACAGTTATTTACGAAATAATAAAGAAGCACGGTTCCGATATTATCGTTGAGGAGTATATCACAGAGGAAGGCGATAGTAAAATTGACTCTGATGACGAAACGGATCAGACAGTACTGGAACTTATCGTTACGTCCAGCAATGATTCTGTCACGATCGAAGAAGTTGGAAAAGAAGAATCGCACAAGTGTCAACTCTGTCCACTGGACTTTAACGAACCGAAATTGTTGATTGATCATTTAACCGACGTTCATCAAGCCGCCGATGACGATATCGAGAAACATTTCGATTCAAGCAATACGGAAATCAAGTGTCCTCATTGCGATAAAACGTTCCGTTTGAATTTACTTTATACGCGTCATTTGGAAACACATGATCCGAACTATCGAAAGAACTGCTGCAAAACGAAAGCCGAATTAGTGCAATTGTACGATTCGAAAATTGGATTTGTTTGCGAGAAATGCGGTAGAAGTTTTTCAAGTCGTTTTGTTCTCAAGGAACACGAAAAGTCGAAATGTGGAACGAAACCGATCTATACATGCGAcgtttgtaataaaaattatcacAGCGCTGGCTCACTGAAAACGCACAAAACGGTTCATACTGGTGCATTGCCGTTCTTGTGTTCGTATTGTGGCAAGGGATTTCGAACAAGAGGTCAGCATAAGGTTCACGTTCGCAAGCATAACGGCGAAAAGCCATTCAAGTGTCACCTATGTACCAAAGCTTTTCCATATCGACAGAGTCTGATAACGCACGTATCGACGCATACCGGCGAAAAACCATTCCAGTGCCAATGCGGACAGAGTTTTTCGtgcgttaaaaatttaatatcgcaTCGGAACACGTTCAAAATGACGTGCGGTACTTTGCCGAAAATTACAAAATCGGCTATTCAGATCGGAGTTATAAAAGGACAATTGTGGTGGAAGTCGAGTTGA
Protein Sequence: MSVAVGQNCGSSSEESSSSSSPLLKKRNYKEATSPAGKHMSRHQPPGGYLCRYCDASHCTKEALTEHVQENHAVFRCAICQSYFEKIDDYTAHIETVHEGRQTIYDQICESCGQKFRSQYALNIHLQSKCGTKRSFKCDECGSNYMSKTTLAAHKLIHTGEKFFCCSYCGKRFISNGQLTVHERKHTKEKPFQCEVCKKSFSYRESLVTHSSLHTGIKPYVCECCGSTFSCVGNLQKHRRARPYSCGMPQYCQRLKRVVPRLSTKLANKPQIKKVVKRLPETSKNLQIKNEQEVDYLKNEADSEQVSGDDQDTIEQDDQDHDDSYENDKLSTESDVEIESPVTVEILNIEPLKEEIDRENVLDMDQMDELFIPDDGNDEQSPYDSSAQDPISEFEGTIIEEIPTVRNTDDLKLTDTVIYEIIKKHGSDIIVEEYITEEGDSKIDSDDETDQTVLELIVTSSNDSVTIEEVGKEESHKCQLCPLDFNEPKLLIDHLTDVHQAADDDIEKHFDSSNTEIKCPHCDKTFRLNLLYTRHLETHDPNYRKNCCKTKAELVQLYDSKIGFVCEKCGRSFSSRFVLKEHEKSKCGTKPIYTCDVCNKNYHSAGSLKTHKTVHTGALPFLCSYCGKGFRTRGQHKVHVRKHNGEKPFKCHLCTKAFPYRQSLITHVSTHTGEKPFQCQCGQSFSCVKNLISHRNTFKMTCGTLPKITKSAIQIGVIKGQLWWKSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00202928;
90% Identity: -
80% Identity: -