Bmor017133.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Beris morrisii
Gene Symbol
Zbtb41
Assembly
GCA_951812415.1
Location
OX638312.1:23495842-23506835[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.049 5.9 8.5 2.0 1 23 235 258 235 258 0.93
2 16 0.011 1.3 10.5 3.0 1 23 293 315 293 315 0.98
3 16 0.0011 0.13 13.7 1.5 1 23 321 344 321 344 0.95
4 16 0.0001 0.012 16.9 1.2 1 23 350 372 350 372 0.97
5 16 3e-07 3.6e-05 24.9 0.6 1 23 378 400 378 400 0.99
6 16 0.00074 0.09 14.2 1.2 1 23 406 428 406 428 0.97
7 16 2.4e-05 0.0029 18.9 4.3 1 23 434 456 434 456 0.97
8 16 4.1e-05 0.0049 18.2 3.3 1 23 462 485 462 485 0.97
9 16 0.001 0.12 13.7 2.1 1 23 501 524 501 524 0.97
10 16 0.97 1.2e+02 4.4 1.4 1 23 529 550 529 550 0.86
11 16 3.3e-05 0.004 18.5 0.7 2 23 577 599 576 599 0.96
12 16 0.37 45 5.7 1.7 1 23 605 628 605 628 0.94
13 16 4.8e-05 0.0058 17.9 2.3 2 23 635 656 634 656 0.97
14 16 0.0034 0.41 12.1 4.3 1 23 662 684 662 684 0.96
15 16 6.8e-05 0.0082 17.5 4.6 1 23 690 712 690 712 0.98
16 16 0.0038 0.46 12.0 3.2 1 23 718 741 718 741 0.97

Sequence Information

Coding Sequence
ATGGACGACGACATTGCCGACGGATCTTTCGAGGCCGAAATTATTCAAGCAGACTTACAAGATTTATGTCGGATTTGTGGCAGTACTTCGGATAGCCCTCTGATTTCACTCTACGAGGGAAACGGACTAAATGAGGAACTTCCTTCGAAAATAATGCTCTATCTGCCCATAAAGATTTCCGAGGAGGATATTCTGCCGTTGAAGGCGTGCGTGAACTGTGCAAACAGCGTCTTGACTTGGCACCTGCTCTACGAGTGTTGCCTTGACGCGGATATTCGTTTCAAAAAGATACTTTCGGAGGAACAACTCATCGAGGATGATCAACAGGCTACGGAAACGCATGACCTTGGTTCTGCGGTTCAGCTGGTGAAAGAAAATGATGTTCAGATTTACGAAGAGAGCAAAGTCGAATTGGACCGCGAAACGGACGAAATTTTAATGTTGAAAACCGAATTTGGTCCGGAGGACGAACAGTATCTTGAGGACGAATCGGACTTGAACAGCGATGAAATCGAATCGGAAAATGATCAACAACCTATAAAACACTCCATATGCGAAAATGTAACCTCAGCAGCCGGATTCGAGTTGATCAATGTCGACCTGTTAGAAGACGTTGAACCAATCATGCGTGCTTCTACAAGTCTGCGACCGCCGAAATTAAACACCATTTCAAAGAACAGTACAATATTGAGGAGTGATAGATTTACATGTCCCGAATGCAATACtacatatttaaataaatttgaattccaCACTCATTTACTCGACGTACATAAAAGTGATCATGAACTGATCGTTACGTTAGGTCACAAACCGGTCAAAATCGACATGAAAACGATATCCGATGCCAGAACTACCATTGATCGTCGAGAATTGTACAAATGTCGCGAATGTAACAAATTGCTTTCTTCTGCGTATTGCTACAGAAATCATTTACTAATTCACATAAACGAGCGTCCTTATAATTGTCTGTTTTGCGACAAATCGTTTCGAGGCCATTCGGGCATTGTGCGACATATCCGTGACACACATTTCAAAATCAAAAGGTTTACGTGTgatatttgtaaaaataaatttacaaatcTTGTAAATTTACAGCAGCACTATCTTTTGCACACTGAAGAGCGTTCTTACGTCTGCGACGTTTGTGGAAAATCTTTTAAGCAAAAAGCCGCGTTATTCATGCATTCCCGGACGCATCAAAATACGTTTCCATACAAGTGTATGTATTGTGATAAAGGATTTCGTACAAAAACTCCAATGCTTTTGCACACGGTAACTCACACAGGCGAAAGGAAACACAAATGTGATGTATGTAATAAAATGTTTCGTCAAAAGACCGACTTGCGCAGTCATAAGCAATTGCATAGCGACACTAAGCCTTTTAAGTGCCAAGAATGTTCGGTTGCTTTTAAACAGAAACGCTATCTAACGAGGCACTATAAAAGTAATCATCCAGGTGTATCTAGACCGCACCGTATATTCAAAAGCCGTCAGCAACATCAGTGTAATTTTTGCGAGACGATCTTCAAAGCTAAGGACCTGCTAACCGAGCATTTAAAAAAAGATCActacaatttaatatttcactgTGACATATGCAATGAATACAAAGATCAAAAAGATTTGATATCACATATGACCGCTCACGCCTTGAGCTCAATACAAAAACAGGACCAAATTTCGAAACCAAAGGATAGCACCGATCAGTCAGCAAACGATAAGTTAAAATGTAAGAAATGCGCAAAAATATTCAGCAGTTTAAGCGGTCTGCGTTACCATATGAACTCCGTACAtgcaaaattgaaaacattCGCGTGTGAAAAATGCTCCAAGATATTCGCATGTAAACGAATCCTCGAGAATCACATTAAAAGTATGCATACGAAAGAGAAACTTTTACAATGCGACCAATGCGAGAAATCTTTCAAAACCGATTCATCACTTTACTCGCATAAAAAAACTCACGTTAATGTGTTTCCTTACGAATGTGCAGAATGCGGTAAGACGTTCCGATTCAAACATCATCATATTGCTCATTTGGACATTCATACTGCAGTTAAAAATCACACATGCAACATATGTAACAAAAAATTCTTCGCTCAGAATAATTTAagtaaacatttgaaaacacATTCGGCAACGTTGGATTTTGCTTGCCATATTTGCGACACAAAGATGAAACAAAAACGATATTTGTACGAGCACATGAAGCGAGTTCATCAACGCGTCTtggattaa
Protein Sequence
MDDDIADGSFEAEIIQADLQDLCRICGSTSDSPLISLYEGNGLNEELPSKIMLYLPIKISEEDILPLKACVNCANSVLTWHLLYECCLDADIRFKKILSEEQLIEDDQQATETHDLGSAVQLVKENDVQIYEESKVELDRETDEILMLKTEFGPEDEQYLEDESDLNSDEIESENDQQPIKHSICENVTSAAGFELINVDLLEDVEPIMRASTSLRPPKLNTISKNSTILRSDRFTCPECNTTYLNKFEFHTHLLDVHKSDHELIVTLGHKPVKIDMKTISDARTTIDRRELYKCRECNKLLSSAYCYRNHLLIHINERPYNCLFCDKSFRGHSGIVRHIRDTHFKIKRFTCDICKNKFTNLVNLQQHYLLHTEERSYVCDVCGKSFKQKAALFMHSRTHQNTFPYKCMYCDKGFRTKTPMLLHTVTHTGERKHKCDVCNKMFRQKTDLRSHKQLHSDTKPFKCQECSVAFKQKRYLTRHYKSNHPGVSRPHRIFKSRQQHQCNFCETIFKAKDLLTEHLKKDHYNLIFHCDICNEYKDQKDLISHMTAHALSSIQKQDQISKPKDSTDQSANDKLKCKKCAKIFSSLSGLRYHMNSVHAKLKTFACEKCSKIFACKRILENHIKSMHTKEKLLQCDQCEKSFKTDSSLYSHKKTHVNVFPYECAECGKTFRFKHHHIAHLDIHTAVKNHTCNICNKKFFAQNNLSKHLKTHSATLDFACHICDTKMKQKRYLYEHMKRVHQRVLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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