Basic Information

Insect: Beris morrisii
Gene Symbol: -
Assembly: GCA_951812415.1
Location: OX638311.1:47043085-47056170[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.8e-05 0.0034 18.7 0.9 2 23 698 719 697 719 0.97

2 12 8.4e-05 0.01 17.2 0.9 1 23 726 748 726 748 0.98

3 12 1.6e-07 2e-05 25.7 0.5 1 23 765 787 765 787 0.99

4 12 1.6e-05 0.002 19.4 0.5 1 23 796 818 796 818 0.96

5 12 2.2e-06 0.00026 22.2 0.5 1 23 824 846 824 846 0.99

6 12 5.6e-05 0.0068 17.7 3.7 1 23 852 874 852 874 0.98

7 12 6.1e-07 7.4e-05 23.9 0.5 1 23 880 902 880 902 0.95

8 12 0.015 1.8 10.1 1.2 1 23 908 930 908 930 0.98

9 12 4.5e-05 0.0055 18.0 2.1 1 23 936 958 936 958 0.98

10 12 8.8e-07 0.00011 23.4 0.9 1 23 964 986 964 986 0.98

11 12 2.3e-06 0.00028 22.1 1.3 1 23 992 1014 992 1014 0.99

12 12 2.4e-05 0.0029 18.9 0.6 1 23 1020 1042 1020 1042 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.8e-05	0.0034	18.7	0.9	2	23	698	719	697	719	0.97
2	12	8.4e-05	0.01	17.2	0.9	1	23	726	748	726	748	0.98
3	12	1.6e-07	2e-05	25.7	0.5	1	23	765	787	765	787	0.99
4	12	1.6e-05	0.002	19.4	0.5	1	23	796	818	796	818	0.96
5	12	2.2e-06	0.00026	22.2	0.5	1	23	824	846	824	846	0.99
6	12	5.6e-05	0.0068	17.7	3.7	1	23	852	874	852	874	0.98
7	12	6.1e-07	7.4e-05	23.9	0.5	1	23	880	902	880	902	0.95
8	12	0.015	1.8	10.1	1.2	1	23	908	930	908	930	0.98
9	12	4.5e-05	0.0055	18.0	2.1	1	23	936	958	936	958	0.98
10	12	8.8e-07	0.00011	23.4	0.9	1	23	964	986	964	986	0.98
11	12	2.3e-06	0.00028	22.1	1.3	1	23	992	1014	992	1014	0.99
12	12	2.4e-05	0.0029	18.9	0.6	1	23	1020	1042	1020	1042	0.98

Sequence Information

Coding Sequence: ATGGGTGTCCTTAAAGCTTCGAAAATTTTCAATGTTCCGCGTTCAACGCTACATCGATTGGCAAGAAAAGTCGACCAGGATATCgatgaaattttttcgataCGTCCAGGACGTAAACCGGTTCTTGGAGTAAAATTGGAAAATGCTTTAGTTAAATACCTGACAGAAATGGGTGcacatttttttagtttaacaCAAACCGATATACGATCATTGGCATTTCAATTGGCCGAAAAAAATAAGATAACGAATCCATTTTGTATTCTTCAGGAAAGAGCCGGAAAAGATTGGCTCTATGGATTTTACAGACGTCATAAAAATGTACTTAGCCTGATTACTGCACCGACTCTTATTGATAAAGTAAAAGGTTTCACctatgaaaatgtaaacaaattttttacagTATTAAGTGAAGCATATTCGAAGCATGAGTTTCCCAGTAGCCGAATATACAATGTCGATGAGACGGGATTTTCATTTGATCAGAGCGGCATCATAACGAGCAAGGTCAGAAAGCAAATAGGATCCATTAGTACTGCTGAACGTCCTCCGCTAGTTACTGTTGTGACATGCATGAGTGCTGGTGGAAATTTCGTTCCGCCGTTCTTCGTTTTTCCGAGTAAAAATGAAGACGTTAAATTTATGAAAGATGCCCCACCAGATTCAAAGGTTGCTTATCACAGTTCGGGATGGATTCAACTTCCAATATTTACAGATTGGTTTTTTCATTTTCTCGAGTATACAAAGCCTACTAAAACAAATCCAGCTCTTCTTGTTTTAGACGGAAACTCGAGTCATACTCGTAACATTCAAGTAATCGATTTAGCTGTGGAAAATGGTGTAACATTACTTTCATTACCGCCGAACTCAACTTATAAAATGCAACCACTCGAAAAAAGTTTTATGGGCCCATTGAAAAATCATTTCAATGAAGAATACGAAAAGCATATAAATGAAACAAGGCAAAGAGTTTCGACCTATGATATGGCAGGACTGTTCGCGAAAGCATATTCGAAGGTGAAAACTAACGAGATAGCGGCAAACGGATTCAAATATACAGGAATTTACCCATACAATAGAGACATATTCCAGGATAGCGATTTCTTAGAGAAGGTCACTGAAAATATTGTCGTTTCTCCATCTTTGGAAGATTTTCCAGGCTATGGGATGCCTGGTACAAaCCGAACATCACCAAAGTTATTTCAAACGAGTTTAACGCCTAAAGAAAAACTATGCACAACAGGTTCGACTCCCTCGACATCTATAGGCTATGAAAATGgctatataaaaaaagaagaataccGGGAAAACATGAGAGATGACAATGAATTGGCGCAAGCAACATCCATCGACTATGAAAACGGTCCCAGCGAAGTTTCAGCTTATCACTTAGATTCATTGGAATGTAATAACTGGCCTCGTGAGTTGAATAGTCGAATGTTAGTGGAAATTAAAGCCGGCCTAGACCGGCTCAACAAACTATGCACGACGATGGATACGAATGTTCAAGAAATAAAAGGAGTATTATGCATTCCCGATAAATACAATTTGGACATTCCGATATTGATGGGAATCGAAGAACTAAACGCTCGCATAGGTGCCGATGAAGAATTCGCGCATTATATTaagaaaaaactTTCGCCCTTCAAGCCACAGGAACGCATTGGACCAGGTTCTTATGGACTGGCAAAAATATTTCTAGATGACGAGCTTCAAGAATATAATTGGGACGGAACCCATGCGAAAAAGTGTTTTCGAAACATGACGAATTTAAACAACGCACTTTTTGATTCATGGAAAGGAAATACATTCGATTCATTTGCAGGATATTCAGTTTCGATCCGTAATCAACTGCAGACGGCAAGATTGCGACGTTTCAAGCGAAAGATGGCGTCAAAAAATGAACTGATTAAGGAGTTCAATTGGCGAGGAGAACAGGGAAAATTGTCATTTAAGAATAATGAACTGTTCTGCTTATTAACAAAAGCTTGGACGTCGATTGATATGAACCTAAACGATCTGCAGAGAACTTTCATGGACGAACTGAAGAAATGCCGAGGAAGATCAAATGCGCTTCCGAAACCCGAACTAGAATGCAAAATCTGTAATAAGGTCTTCGACAAAAATTACCGCCTTATTCGACACAGAAACGTGCATAATGCCGAAGGAAGACCATTCGAATGCGAAATATGTAAAATACGATTTATTCACGAGAGCAGCATGCGACGACATTTAATAGTTCATACGGAGGTAATGAACGAATTCTCGACGATACTGAATCAAAAAACAAACTTTCAATGCCCAGAATGTCCAAAGCAATTTACAAAACAAGCATCTCTATCGTCTCATATGCGAATACATCGTATAGAAATGAACAATAAGGAATATTTATGTGATCTCTGTCCCAAAGTATTCTcgcgtttgaatttattaacaCGCCATGCAAAATCGCATGATCAATTAAGGAATTATCAGTGCAATTTATGCGATAAGAGGTTTGCCTTGAATTCCCAACTTATCGATCATATTAATCGACATAATGGTGTTAAGCCCCATGTGTGTCCTGTTTGTAATAAAGgatttcagCAATCGTGCACGCTCAAAGATCATCTTCGAACGCATAGTGGCGAAACACCATTTCTATGTGCTGAATGCGGAAAAGCATTCAACAATAGCAGCAACTTACGACAACATTTACTACGACATACTGGCGCCAAACCGTTTCAATGTGCCGAATGTCCCAGCCGATTCGCATGCAAAGGCGGCCTGAAATCGCACATGACTACGCATCTCCAACTAAAGCCGTACAGCTGTGATCAATGTGATTCGAAATTTACGAAACCTTATTCACTGAATAAGCACAAACGAATTCATACCGGCGAGAAACCCTATGCCTGCGAAGTTTGCGGAATGAAGTTCAATTCATCCGATCACGTAATACGGCATATGCGTACGCATACGGGTGAAAAACCGTATCGCTGTGAATTCTGTGATCGTTCATTTGCCCAAAGCAACGATCTCGTTAAGCATACGCGAAGTCACGTTGGCGAAAAAACCTACAAATGTCCGGATTGTACGTTGGCGTTTCGATTACATAGTGAATTGCGCGTACACATTCAAGAACATTTCAAACAACGAAAAGTTGGAATGTCCGAATCcgatacaaattcaaattctcacGATGATAGCATGATGGAGAGTCCCGTACAATTTACCGAGCTGTTAGATTTTTCGGTTCagtaa
Protein Sequence: MGVLKASKIFNVPRSTLHRLARKVDQDIDEIFSIRPGRKPVLGVKLENALVKYLTEMGAHFFSLTQTDIRSLAFQLAEKNKITNPFCILQERAGKDWLYGFYRRHKNVLSLITAPTLIDKVKGFTYENVNKFFTVLSEAYSKHEFPSSRIYNVDETGFSFDQSGIITSKVRKQIGSISTAERPPLVTVVTCMSAGGNFVPPFFVFPSKNEDVKFMKDAPPDSKVAYHSSGWIQLPIFTDWFFHFLEYTKPTKTNPALLVLDGNSSHTRNIQVIDLAVENGVTLLSLPPNSTYKMQPLEKSFMGPLKNHFNEEYEKHINETRQRVSTYDMAGLFAKAYSKVKTNEIAANGFKYTGIYPYNRDIFQDSDFLEKVTENIVVSPSLEDFPGYGMPGTNRTSPKLFQTSLTPKEKLCTTGSTPSTSIGYENGYIKKEEYRENMRDDNELAQATSIDYENGPSEVSAYHLDSLECNNWPRELNSRMLVEIKAGLDRLNKLCTTMDTNVQEIKGVLCIPDKYNLDIPILMGIEELNARIGADEEFAHYIKKKLSPFKPQERIGPGSYGLAKIFLDDELQEYNWDGTHAKKCFRNMTNLNNALFDSWKGNTFDSFAGYSVSIRNQLQTARLRRFKRKMASKNELIKEFNWRGEQGKLSFKNNELFCLLTKAWTSIDMNLNDLQRTFMDELKKCRGRSNALPKPELECKICNKVFDKNYRLIRHRNVHNAEGRPFECEICKIRFIHESSMRRHLIVHTEVMNEFSTILNQKTNFQCPECPKQFTKQASLSSHMRIHRIEMNNKEYLCDLCPKVFSRLNLLTRHAKSHDQLRNYQCNLCDKRFALNSQLIDHINRHNGVKPHVCPVCNKGFQQSCTLKDHLRTHSGETPFLCAECGKAFNNSSNLRQHLLRHTGAKPFQCAECPSRFACKGGLKSHMTTHLQLKPYSCDQCDSKFTKPYSLNKHKRIHTGEKPYACEVCGMKFNSSDHVIRHMRTHTGEKPYRCEFCDRSFAQSNDLVKHTRSHVGEKTYKCPDCTLAFRLHSELRVHIQEHFKQRKVGMSESDTNSNSHDDSMMESPVQFTELLDFSVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -