Bmor021484.1
Basic Information
- Insect
- Beris morrisii
- Gene Symbol
- ZFY
- Assembly
- GCA_951812415.1
- Location
- OX638312.1:92213372-92230076[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0019 0.23 12.9 3.2 1 23 79 101 79 101 0.98 2 14 6.5e-06 0.00078 20.7 0.4 1 23 107 130 107 130 0.97 3 14 4.9e-06 0.00059 21.1 2.6 1 23 146 168 146 168 0.99 4 14 4e-05 0.0049 18.2 0.3 2 23 308 329 307 329 0.97 5 14 3.1e-07 3.8e-05 24.8 1.3 1 23 335 358 335 358 0.96 6 14 0.00089 0.11 13.9 3.9 1 23 366 388 366 388 0.99 7 14 0.0071 0.86 11.1 0.3 2 23 395 417 394 417 0.97 8 14 0.00065 0.079 14.4 4.0 2 23 430 451 429 451 0.97 9 14 1.9e-06 0.00023 22.4 0.3 1 23 457 480 457 480 0.97 10 14 3.5e-07 4.2e-05 24.7 4.0 1 23 492 514 492 514 0.98 11 14 4.8e-07 5.9e-05 24.2 2.4 1 23 520 543 520 543 0.98 12 14 0.0033 0.4 12.2 0.6 1 23 551 573 551 573 0.98 13 14 0.0026 0.31 12.5 3.5 1 23 579 602 579 602 0.98 14 14 6.7e-06 0.00081 20.6 0.2 1 23 612 634 612 634 0.98
Sequence Information
- Coding Sequence
- ATGATCGAAACGGAAAAGATAGAAAACTATACAAATGATGTTTTAGATAGAATAACTTTACCGAAGATGTTCGACCCTCATATTATGAACCAGCAGACTTCTCTCATACAGGAAGTCAAGCAAGAAGCCGAAATCGAGATAAGTGTGGACGAAGAAGATTTCAACGAAACTACTCCAGATCAAACATGTCTTGGGAGCGACTTACGATATCCGGTAGAAGCGAATAATAGGAAGTTTAAATGTGCAATCTGTTCGAAATTATTCGGTTGccaaagtaatttaaatagGCATAAAAGAATACATACTGGGGAAAAACGATATCAATGCGAAATTTGCTCGGAAAAATTTCGTTACAAGTCTCCTTTAACGGTACACATGGAAAAGGCACATATTGATAAAACAACAGTCGGAATTGCGAACACTACAAGTAAAAAGTTCAAATGTACGGTTTGTTCGAAATCATTCAGACGTAAAAATTCGATGGATATGCATATGAGGGTTCATACAGGCGAAAAACCATATCAGTGCGAGGTATCTTCGAACGATGGTCTCCCGAATATCATTTGTGATGATTGTTTCaacaaaatataccagtcgtacgTTTTCAAGCTAAAATTCGAAAAGTCATCGCTCATTTTGAGGAACTTGATAGAGAAAAGAATGTGTGTGGATGAGTTGATGAATCCTACCAACGTATATAAGCACTGTACAGAACTGAGCATGAAATTGATCAAAACGGAAAATACCGGAGAATATGTTACATCAAATAATGAACAATTTGAAGAGCTCAGTTCATACGAGGTGTTAGAAGATATTTCTCTCTTACAAGAAGTTAAACAAGAGCCCGAAATCGATATAAATATGGGAGAAGTAAAAGTCAATCAAACTGGTTCAGACGAAAAGTGTTCGAAAAGCAATTTACAATGTTTGGTATGtttaaaaatctttaagaatAAAGCCAATGTGAAAGCTCATATGATAACTCATACGGATGAAAGACCATTTCATTGTGAAATTTGCCCAAAAACCTTTCGATCCAAGTATAATTTAGTGGTACACATGCAATTGATACATGCCGATTTATCGAAAATGAAGTATAAATGTTCAATATGCTCGAAATTATGCGTAAATAAGACCCGCTTGTATCAGCATATGAGAGTTCACACGGAAGAAAAACCAGTTCAATGTGAGCTGTGtgaagaaaattttcaatttgaaacCGATTTTACGTCACATATACAAACGGTACATGgcaatgaaaaaaagaagaaaaccaaaaaaatcttaaaatgtcCCGAATGTTCGAAACTATTCGGATGTCATAGTAATTTGAATAGGCATATGCGAATTCATACTGGAGAAAAACCATTTCAATGTGAAATTTGTCCCGAAACATTTCGTTATAAGTCTCCGTTGACGGTGCACATGGAAAAGGAACATTCCGATAGATCAATGAccaatgaaaagaaaattttttactgtccGACATGTTCGAGATCTTTTAAACGTAGAAGTTTTCTCAATACGCATATGCGAACTCATACAGGAGAGAAACCATTTCAATGCGATATATGTCGAAAGAAATTtcgatttaaaacaaatttaacggtACATATGCAAACGGTCCATGGCGACGAAACAACGATGAAGTTTAAATGTGAAATATGCTCGCGATTATATCTTAGTAAGTCGGTATTAAATCGGCATATGTTAATTCATTCGGCGGAAAAATCATTTCGATGCGAAGTTTGCTCGAAAAAGTTTCAATGTAAGGGCAATTTGACGGTACATTTGAAGAAGATACATGCTAATGGAACAGCGaatgaaacaaaatttgaatgtgcGACATGTTTGAAAGTGTTTCCTTCGAAAGGTTCATTGAATATGCATATGCGAATTCATAAACGAAAAAAACCCTTAAAGTGCGAAATTTCTAGATAA
- Protein Sequence
- MIETEKIENYTNDVLDRITLPKMFDPHIMNQQTSLIQEVKQEAEIEISVDEEDFNETTPDQTCLGSDLRYPVEANNRKFKCAICSKLFGCQSNLNRHKRIHTGEKRYQCEICSEKFRYKSPLTVHMEKAHIDKTTVGIANTTSKKFKCTVCSKSFRRKNSMDMHMRVHTGEKPYQCEVSSNDGLPNIICDDCFNKIYQSYVFKLKFEKSSLILRNLIEKRMCVDELMNPTNVYKHCTELSMKLIKTENTGEYVTSNNEQFEELSSYEVLEDISLLQEVKQEPEIDINMGEVKVNQTGSDEKCSKSNLQCLVCLKIFKNKANVKAHMITHTDERPFHCEICPKTFRSKYNLVVHMQLIHADLSKMKYKCSICSKLCVNKTRLYQHMRVHTEEKPVQCELCEENFQFETDFTSHIQTVHGNEKKKKTKKILKCPECSKLFGCHSNLNRHMRIHTGEKPFQCEICPETFRYKSPLTVHMEKEHSDRSMTNEKKIFYCPTCSRSFKRRSFLNTHMRTHTGEKPFQCDICRKKFRFKTNLTVHMQTVHGDETTMKFKCEICSRLYLSKSVLNRHMLIHSAEKSFRCEVCSKKFQCKGNLTVHLKKIHANGTANETKFECATCLKVFPSKGSLNMHMRIHKRKKPLKCEISR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -