Bmor022023.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Beris morrisii
Gene Symbol
ZNF584
Assembly
GCA_951812415.1
Location
OX638312.1:104891384-104902414[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 6.7 8.1e+02 1.8 0.9 3 23 147 168 146 168 0.92
2 26 0.45 55 5.4 1.7 1 23 190 213 190 213 0.96
3 26 0.018 2.2 9.8 1.1 2 23 219 240 218 240 0.95
4 26 0.0035 0.42 12.1 6.4 1 23 246 268 246 268 0.98
5 26 0.0015 0.18 13.2 1.0 1 23 274 296 274 296 0.90
6 26 6.5e-06 0.00078 20.7 1.5 1 23 316 338 316 338 0.99
7 26 0.036 4.4 8.9 0.8 1 23 344 367 344 367 0.95
8 26 0.3 36 6.0 0.1 2 23 385 406 384 406 0.96
9 26 3.6e-06 0.00044 21.5 1.5 1 23 412 435 412 435 0.96
10 26 4e-06 0.00049 21.3 0.6 1 23 441 463 441 463 0.97
11 26 0.049 5.9 8.5 3.4 1 23 469 491 469 491 0.99
12 26 0.005 0.61 11.6 0.2 1 17 497 513 497 519 0.85
13 26 0.014 1.8 10.1 1.7 1 21 668 688 668 689 0.96
14 26 0.078 9.4 7.8 0.1 3 23 698 719 697 719 0.95
15 26 0.35 42 5.8 1.1 2 23 726 748 725 748 0.90
16 26 4.5e-05 0.0054 18.0 3.8 1 23 756 779 756 779 0.97
17 26 0.11 14 7.3 3.4 1 23 784 806 784 806 0.97
18 26 0.011 1.3 10.6 5.9 1 23 812 834 812 834 0.96
19 26 0.0012 0.14 13.6 0.5 3 23 842 862 840 862 0.95
20 26 0.00013 0.015 16.6 2.4 2 23 879 900 878 900 0.97
21 26 0.001 0.12 13.8 0.9 1 23 908 931 908 931 0.95
22 26 0.004 0.49 11.9 0.1 1 23 951 973 951 973 0.99
23 26 1e-05 0.0012 20.1 1.3 1 23 979 1002 979 1002 0.95
24 26 1.3e-05 0.0016 19.7 1.5 1 23 1008 1030 1008 1030 0.97
25 26 0.0045 0.54 11.7 0.7 1 23 1036 1058 1036 1058 0.98
26 26 0.0022 0.27 12.7 1.4 1 23 1064 1086 1064 1086 0.96

Sequence Information

Coding Sequence
ATGGATGTGCCTGCGGTAATCGTTTTAGAGAAAACATGCCGTACCTGTATGACGCAGGAGACCAATGATGATTTTATACCTCTGTTCCAAGGTTCAGTGTCCTGTAGATGTGCTCATCCTGAGATCTTCGAAGAGCTGTTGTTCTTCAATTTACAGGAATCATCCTCCAGTGTGAAAGATTCGAATGAAGATCGGATTGACGAAAATCTGCTTCTAGAGTACATCGAAGAAGATTACTCAATGGACTACGAAGAAAATCAGCAGATAAAAAACCAGGACGAAATGTTAGGGTtcgaaataaaagaaatagagGAGAATAAGATTACCAAAGTCGATATCAAGTCGAATTTTTTGTGTAAGTTTTGTAAAAAAGAGCATGTCGGACTAAACGATCTTTCAAAACACATTAAACAATGTCCGAGTCGAAACGTCGAAATTTGCGATTATTGTACAAATGAATTTGAATGCAAAGAGAAGCTTGACGCACATTTGAAAGAAATACACCCAGACGGCGGCAAACCTAACAGTCCAGTTTGTAGTATTAGATATCATGAAAATAACGATAGATTTCAATGTTCTACTTGCTATCGGTTTTTTCTAACTGCAAATAGACTTAAAATCCATGAACAACGCGTTCATACAATAATAGAAAAAGAATGTTCGATTTGTCAAAAGAAATTTACCAACATTCTTCGCTACAACTATCATATGGCATCACACAAACCGAAAAAGAAATATCAGTGTCAATATTGCGATAAATTCTTTGTGCAGATTCATCATAAGCAAAGGCACGAAAAAATACATACCGGTGAACGTCCGTACTTGTGTAATATTTGCGGAAAAAGTTTTCAATATGAGCAACTGTTCAAGAAGCATAATGCATTGCATGATAAAGTACCAAACGATAATATTGCTCGACCGGAAACTCCGATACTTATTGGTCCCTACCAATGTTATATATGTGGCAAATACTTCAATAAAAAGGGCGTACTGAATACTCATATGCAAACGCATAAACGCTTTCGACCCTTTGAATGTGATCAATGCGAAAAAACGTGGCGATCGAAAAATGCATTGCAAATGCATAAATACAAGGCACATCGTAGTGGCTCAAGTACGAATGAGAATAATTTGACAGGAGATTATCCTTTACGTTGTTCGTTTTGTTCGAAAGGTTTTTTGGTTGCCTATGCACTTTCCGAACATGTAAAAATTCATAGCGAAGATCGGAAACATGTTTGCAAAGATTGCGGCTATGCTTTTAAGCGAGAAGGGCATTTGAATATTCACATAAGCCGTGTTCATAAAAATTTGCGACAATTCCCATGCGAACATTGTGAAAAATCATTTGTAAATAGAGGCGAATTAAATGCACATAGAGTAACACACAATGATGAAAAACCGTTCAAATGTACTTTCTGTCCGAACGCATTCAAATGGAAATGTGCGTTACGAACTCATGAACGTACGCACACGGGAGAGAAACCATTTCCTTGTGAAGTTTGTGGAAAACGATTTGCAACAAGCCAGACACTAGTCTtTCATTCAATATTACATTCAAAAAATCGGAAGAAAATAGTTGACGATTGCAATGTAACAAGATTGGAAAACTTCCCGACAAATTACGAAGAAATCGAAGATAACTTTGAAATAGAAttgtgGGAGCGTGATGGACTTCCGCAGCAAATATGTATAAGCTGCTTTGATACATTTATGCAGATATGTGAATTTCGAAAACAATGCAATGCAGTTCAGGATAATCTTACAGCTTATTGTGGAAGCGCATTAGATATAACAGAAGAGATCAAGCTCGAAATTGAAAGAATTAATAATTTCTCAGCTACCGACTTCATTTGTAAGAGTGATTCATTCTCCAGCGGGAAAGATTTAAACGAAGATGCAGAATACATCGAAGAAGAATATGAACTGGACTACGAGGAAAATAACCACATCGAAAATGAGGTCAAGgaaGAAATTGTCGAGGTCGATACCAAGTCGAATTATTCgtgtaatttctgtaaaaatgaATATTACAATGAAAGTCATCTTAAAGAACACATTCAACAATGTTCGAATCGCAGAATCGAAATATGTGACTATTGTACTAGTGAATTTGAATCGATGGAATTGCTGGAAGCGCACTTGAAAGAGGTACATCCGGACAGCGGCAAGCTTACGTGTCCCGTTTGTAATTGTACATTTATAAGTGTGGAACGTCGTAATATTCACATTGACAAGTTCCACAATACAAGTAGTACCGAACCATTTCAATGTACATCATGCGATCGTTCGTTTAAATCTAAATGGTACCTTAAAAAACATGAGCAACGCTTCCATAGTACAGTCGAACATGAATGTTCGGTTTGTCAACAGAAATttaccaacatttttcgatacAAATATCACATAGAGTCGCACAAACCGAAAAAGAGATTTCAATGCGAATATTGTGATAAATCATTCATGCAACTTCACCATAAGATTAATCACGAAACAAAGCATACAGGCGCACGTCCGCATTTGTGTAATATTTGCGGGAAAGGTTATAAATCTGAACAACCGTTAAAGGAACACTTAGCACGGCATAACGGTATTAGTAGAGTTAAGAAAGTCAAGAAACCTACGGCGAAACTTAAATGCAATATTTGTAGTAAAGATTTAAGTAGTAAGCACACATTACGAGCTCACATGCTTAGACATACGGACCCAGATCTCCGACCATTCCAATGTGATAAATGCAATAAGGCGTATGGAACGAGACCTGAATTACAACTGCACAAATACAGGATGCATAGCGTGCCTCGTCCGGGTGACGATAATTTGACAAGTGAAAATACCCGGAGCTATCCTTTTCGTTGTTCAGTTTGTTCGAAAGGCTTCTTGGTCGCCTATGCACTTGCAGATCATATAAAAACTCATAGCGAAGATCGGAAATTTATTTGCGGAGAATGCGGAACAGCTTTTAAGCGACAAGCACATTTGAATGCACATACAAATCATGTTCATTTAAAATTGCGACAATACCATTGTGACCTTTGTGATAGATCATTTGTAACTAAAAGTGATTTAAAGGGGCATAGATTGATTCATCTTGATGAGAAACCATTCAAATGTACCTTCTGTCCAAAAGCATTCAAATGGAAAAATGTGTTAGTAGTACACGAACGTACTCATACAGGCGAAAGACCATATCCTTGTGAAATATGTGGAAGACGATTTATATCAAATCAGACATTAATGTGTCATTCAATGACGCATCCAGATGTCGAGAAGAAAGTAGTACAAGATAATATTTTATTAGAATTGAAAAATACCAAGGAAAATTGCGAGGAAATCGATGATATTTAG
Protein Sequence
MDVPAVIVLEKTCRTCMTQETNDDFIPLFQGSVSCRCAHPEIFEELLFFNLQESSSSVKDSNEDRIDENLLLEYIEEDYSMDYEENQQIKNQDEMLGFEIKEIEENKITKVDIKSNFLCKFCKKEHVGLNDLSKHIKQCPSRNVEICDYCTNEFECKEKLDAHLKEIHPDGGKPNSPVCSIRYHENNDRFQCSTCYRFFLTANRLKIHEQRVHTIIEKECSICQKKFTNILRYNYHMASHKPKKKYQCQYCDKFFVQIHHKQRHEKIHTGERPYLCNICGKSFQYEQLFKKHNALHDKVPNDNIARPETPILIGPYQCYICGKYFNKKGVLNTHMQTHKRFRPFECDQCEKTWRSKNALQMHKYKAHRSGSSTNENNLTGDYPLRCSFCSKGFLVAYALSEHVKIHSEDRKHVCKDCGYAFKREGHLNIHISRVHKNLRQFPCEHCEKSFVNRGELNAHRVTHNDEKPFKCTFCPNAFKWKCALRTHERTHTGEKPFPCEVCGKRFATSQTLVFHSILHSKNRKKIVDDCNVTRLENFPTNYEEIEDNFEIELWERDGLPQQICISCFDTFMQICEFRKQCNAVQDNLTAYCGSALDITEEIKLEIERINNFSATDFICKSDSFSSGKDLNEDAEYIEEEYELDYEENNHIENEVKEEIVEVDTKSNYSCNFCKNEYYNESHLKEHIQQCSNRRIEICDYCTSEFESMELLEAHLKEVHPDSGKLTCPVCNCTFISVERRNIHIDKFHNTSSTEPFQCTSCDRSFKSKWYLKKHEQRFHSTVEHECSVCQQKFTNIFRYKYHIESHKPKKRFQCEYCDKSFMQLHHKINHETKHTGARPHLCNICGKGYKSEQPLKEHLARHNGISRVKKVKKPTAKLKCNICSKDLSSKHTLRAHMLRHTDPDLRPFQCDKCNKAYGTRPELQLHKYRMHSVPRPGDDNLTSENTRSYPFRCSVCSKGFLVAYALADHIKTHSEDRKFICGECGTAFKRQAHLNAHTNHVHLKLRQYHCDLCDRSFVTKSDLKGHRLIHLDEKPFKCTFCPKAFKWKNVLVVHERTHTGERPYPCEICGRRFISNQTLMCHSMTHPDVEKKVVQDNILLELKNTKENCEEIDDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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