Bmor008301.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Beris morrisii
Gene Symbol
ehn-3
Assembly
GCA_951812415.1
Location
OX638311.1:11214795-11237319[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 3.2e-05 0.0039 18.5 2.7 1 23 178 201 178 201 0.97
2 21 0.00072 0.087 14.2 3.4 1 23 211 233 211 233 0.99
3 21 0.00094 0.11 13.9 1.3 1 23 239 262 239 262 0.98
4 21 1.7e-07 2.1e-05 25.6 0.5 1 23 400 422 400 422 0.98
5 21 0.00029 0.036 15.5 4.4 1 23 428 451 428 451 0.98
6 21 0.00085 0.1 14.0 0.4 1 23 460 482 460 482 0.97
7 21 2.2e-05 0.0026 19.0 3.2 2 23 490 512 489 512 0.97
8 21 1.2e-05 0.0014 19.9 2.9 1 23 522 544 522 544 0.98
9 21 0.29 35 6.0 0.4 2 15 679 692 678 692 0.91
10 21 9.4e-05 0.011 17.0 1.6 1 23 727 749 727 749 0.99
11 21 3.8e-05 0.0047 18.2 0.1 1 20 755 774 755 776 0.96
12 21 7.5e-06 0.00091 20.5 0.7 2 23 890 911 889 911 0.97
13 21 1e-06 0.00013 23.2 2.2 1 23 917 940 917 940 0.97
14 21 0.016 1.9 10.0 0.7 2 23 951 972 950 972 0.96
15 21 0.0021 0.25 12.8 3.5 1 23 978 1001 978 1001 0.97
16 21 9.9e-07 0.00012 23.2 1.5 1 23 1011 1033 1011 1033 0.98
17 21 0.00022 0.027 15.8 7.5 1 23 1039 1062 1039 1062 0.98
18 21 2e-05 0.0025 19.1 1.0 1 23 1072 1094 1072 1094 0.98
19 21 0.0023 0.28 12.7 3.9 1 23 1100 1123 1100 1123 0.97
20 21 7.8e-05 0.0095 17.3 2.0 1 23 1132 1154 1132 1154 0.97
21 21 6.6e-05 0.008 17.5 0.6 1 23 1160 1183 1160 1183 0.98

Sequence Information

Coding Sequence
ATGGATCAAAATAATGAGGCCGATTATTTGAGGAAAGTGTGCAGAACTTGTCTTCTATCCAGCGAAAATATGCTGTCGATATTTAGCTCGATTGAGGTGCCAGCATTGAACGACTTACAACTTCCAGTGGTTGATTTGTTAAACATTTTCACGGATATATCGGTATCACCTAACGATGGGTTTCCCGATAACATTTGTAGCGATTGCCTTGACAAAATACATCAAACGTATACTTTCAAATTGAAATGCGAAAAATCAGAAGCCATTTTGAAGCAGCTCAAGAAAGATGACAAAATTATCAATTTGATAAACTCTCCCAACGAATTCGAAAAGAGAATTGCCTTAATCAAAACAGAAAAGCaagaaatttatgaaatattagaaaatgAGCATTTAGAACACGTCTGCGCACCAGAGATTATCGAACATGAAATTGTAAGTCAGGAGATCTCACTCGTACAGGAAGTAAAACAAGAACTTGCAATCGAGATTAATATGGAAGGAGATTCAAACGAGACTGAAGTCGGATTATTTCATTGCGACGATTGTTCACAGAAATTTCGTTATAACGACGATTTGAAAAGTCATATACAAACGGAACATGCCATTGTAAAAATGTGCAATGTTAAGTTTAAATGTACGACATGCTCAAGCTTATTTGATCGTAAAAGTTACTTGTATCGGCATATGAAAATTCACACAGAAGTGAAACTATTTCAGTGTGAAATTTGTCCAAATAATTTTCGAGCTAAGAGATATTTGAAAGATCATAAGCGTAGAGTACATGGAGTATCTCCGAACGATGGCCTTCCCGATAATATTTGTGGCGAGTGCCTCAATGAAATACATCAAACGTATACTTTCAagttaaaatgtgaaaattcagACACCATTTTGCAGCAAGTAAAAGATGATgggaaaaatttgaatgaattgcGGAATTCCCAAAACGAAAATGAAGAATATAGTAAAACTAGAATAATCAAAACCGAAAAGAAAGATGTTTATGAAGAAATATTAAATAGTGATCATCCAGATTTTTGTTTGCCGGACGGGCTTGAGCCTGAATCAAAACAAGACTCACCGCTTCTTCAAGAAGTAAAGCAAGAACCCAACATCGAAATTATTATGGACGATGAAGACGACAATGACGAAAATAATGGAGACGAGGATGGTTCTAAAAGCGATAAGAGATATTATAAATGTACAATTTGTTCGAAATCATTCGGACGTAACGGTGATTTAAACCGGCATATGATCGTTCATACCGAAGAAAGACCATTTCAGTGTAAAATTTGTctacaattttttcgatttaagCACAGTTTAAAAAATCATATGGACACGGCACATGCCGACAATAAATCGGATTCAACGTTTAAATGTACGATATGTTCCAGTGTATTCGGACGTGAACAATATTTGGCACGGCATATGGTGAATCATACTAGAGCTAAGCCCCTCCTTCAGTGCGATATTTGTGCACAAGAATTTCGCCATAAGCACAATTTACAGAGGCATGTACGAACGGTACATGCCGACACAACGATGAATAATTTACGATTTGAATGTGCGACTTGTTCGAAATCGTTCGGACGTAAAGAACACATGGAACGGCATTTACGAACTCATACCGGCGAAAAGCCTTATCAGTGCGAAGTATCTCGTAATGACGGTCTTACCGATCACATTTGTAACGACTGCCTCGATGAAATACAGCAAATGTATACTTTCAAGTTGAAATGCGAAAAATCAGAAGTCATTTTGAAGCAATTAAGAGACGATGGAAAAAGTGTGATTGCTCCCAACGAATATGAAGACTACTTGCATTCTGAAACGAGCAGTGAACTAATAACAATCAAAATAGAAAAGACAGAAGAATATGAAAATTCAAAGGACGAACAGACAGAAGAGACAGGCTTACCAGAAATATTTATCGCacaagaaataaagcaagaaccCGCAATCGACATAATTACTGAAGAAGCTGAATCGAAATATGATTACAACGTGGAATCTTTCATTTGCGACTTACGATGTTCGGAGTGTACGAAAATCTTCGAAAATAAGTACAACTCCAATGCTCTTATTAAAAAGTTTCACATTGGCGAAAGACCTTTTAGATGTAAAAATCATGCTGAAAATGGATATCAAAATCGCATACATCCCATAAAAGAGTATAGATGTACGAAATGTTCGAAATTAACTGTACGCGCAAGCGATATGAAGCGGCATATGAAGATTCATACAGAAGAAAAACAATACCAGTGCGAAATTTGTCCAAAAACATTCCTTCGCAAGCCCAATTTGATACGGCATATGGTATCTCCTAACGATGGTCTTCCCGACAACATTTGTAGCGATTGTCTAGACATTTTACAGAACTGGTATGCATTCAAGTTAAAATGCGAAACCGTTTCGAAGCAATTACAGGACGATAAAAAACATATAACGATGAGTAATGCCCGAATCAAAATCGAAAGTATAGAAGATTATGAAACATTAAACGAAGAACAGTTAGAGCAGGACATTTTCAATCGTGACGATACGGTGCAAGATGTATCTTATGTACAGAAAGTCAAACAAGAACCCGAAATCGATATAAATaccgaaaaagatgattttaacGAAATCGAAACGGACAAGCAACATATTAAAAACAACTTAAAATGTTGGGTGTGTATGaaagtattcaagaataaatacaatttgaaaattcatattcgGATCCATACTGGCGAGCAGCCatacaaatgtgaaatttgctCAAAATCATTTCGCTACAAAGATCATTTACGTGAACACATTTCGATCGATCATCCGGCAGAGGTGCCAGCTAAAAACTATTTGAATTGTGAAATTTGTTcgaaaattttcttgaaaaagaGTCGCTTTATTAAACATATGGAAATTCATACGACCGATCGTCCATTTCAATgtgaaaattgttcgtctaCGTTTGCCCATAGCAACACTTTAACGCGTCACAAACAAATCTATCATCCGAATGAATGGACCGGGGTAAACAGCTTTAAATGTCCGATCTGTTCGAAAGTATTCACGAGAAATAGCGATTTTATAATGCATTCCAGACGCCATTCCGACGAAAGACCATTTAAATGTGATTTTTGTACGAAAAAATTCCGATATAAATGCAATATGAAAAATCATATGAAAACGGCCCATGACGACGGAACAACGGACAATCGAAAGTTCAAATGTGCAACATGTTCGACATTTTTCGGACGTCGAAGCGATTTAAATCGTCATATGATAATACACAGTGGAGAAAAGAGTTTTCAATGCGAAGTTTGCCTAAAAAAGTATCGATTTAAACATAGTTTGAAAAATCATAAGCAAGTAGCGCATGTCGATGAAAAAAcggctagaaaatttaaatgtacGACATGTTCGCGATCATTCGGATTTAAATACGAGCTAAAACAACATATGGGAATACATACGGGTGAAAGACCGTATCAGTGCGaggtttgtaataaaaaaattcgacTCAAGAGCAATTGGAAAGCGCATATGCAAAGAATACATGGTATTAAAATGCAATCGCTTGACACCAGTAAGGTAACCGTAGCCGTGCCACAAAAAGAATAA
Protein Sequence
MDQNNEADYLRKVCRTCLLSSENMLSIFSSIEVPALNDLQLPVVDLLNIFTDISVSPNDGFPDNICSDCLDKIHQTYTFKLKCEKSEAILKQLKKDDKIINLINSPNEFEKRIALIKTEKQEIYEILENEHLEHVCAPEIIEHEIVSQEISLVQEVKQELAIEINMEGDSNETEVGLFHCDDCSQKFRYNDDLKSHIQTEHAIVKMCNVKFKCTTCSSLFDRKSYLYRHMKIHTEVKLFQCEICPNNFRAKRYLKDHKRRVHGVSPNDGLPDNICGECLNEIHQTYTFKLKCENSDTILQQVKDDGKNLNELRNSQNENEEYSKTRIIKTEKKDVYEEILNSDHPDFCLPDGLEPESKQDSPLLQEVKQEPNIEIIMDDEDDNDENNGDEDGSKSDKRYYKCTICSKSFGRNGDLNRHMIVHTEERPFQCKICLQFFRFKHSLKNHMDTAHADNKSDSTFKCTICSSVFGREQYLARHMVNHTRAKPLLQCDICAQEFRHKHNLQRHVRTVHADTTMNNLRFECATCSKSFGRKEHMERHLRTHTGEKPYQCEVSRNDGLTDHICNDCLDEIQQMYTFKLKCEKSEVILKQLRDDGKSVIAPNEYEDYLHSETSSELITIKIEKTEEYENSKDEQTEETGLPEIFIAQEIKQEPAIDIITEEAESKYDYNVESFICDLRCSECTKIFENKYNSNALIKKFHIGERPFRCKNHAENGYQNRIHPIKEYRCTKCSKLTVRASDMKRHMKIHTEEKQYQCEICPKTFLRKPNLIRHMVSPNDGLPDNICSDCLDILQNWYAFKLKCETVSKQLQDDKKHITMSNARIKIESIEDYETLNEEQLEQDIFNRDDTVQDVSYVQKVKQEPEIDINTEKDDFNEIETDKQHIKNNLKCWVCMKVFKNKYNLKIHIRIHTGEQPYKCEICSKSFRYKDHLREHISIDHPAEVPAKNYLNCEICSKIFLKKSRFIKHMEIHTTDRPFQCENCSSTFAHSNTLTRHKQIYHPNEWTGVNSFKCPICSKVFTRNSDFIMHSRRHSDERPFKCDFCTKKFRYKCNMKNHMKTAHDDGTTDNRKFKCATCSTFFGRRSDLNRHMIIHSGEKSFQCEVCLKKYRFKHSLKNHKQVAHVDEKTARKFKCTTCSRSFGFKYELKQHMGIHTGERPYQCEVCNKKIRLKSNWKAHMQRIHGIKMQSLDTSKVTVAVPQKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-