Basic Information

Insect: Beris morrisii
Gene Symbol: -
Assembly: GCA_951812415.1
Location: OX638311.1:11264740-11271458[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 5.4e-06 0.00066 20.9 1.8 1 23 82 104 82 104 0.98

2 20 1.5e-06 0.00018 22.7 1.5 1 23 110 133 110 133 0.98

3 20 7.7e-07 9.3e-05 23.6 0.9 1 23 246 268 246 268 0.98

4 20 7.3e-06 0.00089 20.5 0.4 1 23 274 297 274 297 0.98

5 20 0.00024 0.03 15.7 0.7 1 23 302 324 302 324 0.99

6 20 1.2e-06 0.00015 23.0 0.8 1 23 330 353 330 353 0.98

7 20 2.6e-06 0.00031 21.9 1.1 2 23 360 381 359 381 0.98

8 20 0.0001 0.012 16.9 1.7 1 23 387 410 387 410 0.98

9 20 0.0028 0.34 12.4 0.4 1 23 418 440 418 440 0.99

10 20 0.027 3.3 9.3 5.7 1 23 446 469 446 469 0.97

11 20 0.00019 0.024 16.0 2.1 1 23 479 501 479 501 0.98

12 20 0.0027 0.33 12.4 4.4 1 23 658 680 658 680 0.98

13 20 3.2e-06 0.00039 21.6 1.1 1 23 698 720 698 720 0.98

14 20 2.6e-05 0.0032 18.8 2.4 1 23 726 749 726 749 0.98

15 20 0.00039 0.048 15.1 6.0 1 23 759 781 759 781 0.99

16 20 4.3e-05 0.0052 18.1 1.8 1 23 787 810 787 810 0.98

17 20 0.00012 0.015 16.7 0.2 1 23 818 840 818 840 0.98

18 20 0.00059 0.071 14.5 2.5 1 23 846 869 846 869 0.98

19 20 4.7e-06 0.00056 21.1 0.7 2 23 880 901 879 901 0.97

20 20 4.3e-06 0.00052 21.2 5.5 1 23 907 930 907 930 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	5.4e-06	0.00066	20.9	1.8	1	23	82	104	82	104	0.98
2	20	1.5e-06	0.00018	22.7	1.5	1	23	110	133	110	133	0.98
3	20	7.7e-07	9.3e-05	23.6	0.9	1	23	246	268	246	268	0.98
4	20	7.3e-06	0.00089	20.5	0.4	1	23	274	297	274	297	0.98
5	20	0.00024	0.03	15.7	0.7	1	23	302	324	302	324	0.99
6	20	1.2e-06	0.00015	23.0	0.8	1	23	330	353	330	353	0.98
7	20	2.6e-06	0.00031	21.9	1.1	2	23	360	381	359	381	0.98
8	20	0.0001	0.012	16.9	1.7	1	23	387	410	387	410	0.98
9	20	0.0028	0.34	12.4	0.4	1	23	418	440	418	440	0.99
10	20	0.027	3.3	9.3	5.7	1	23	446	469	446	469	0.97
11	20	0.00019	0.024	16.0	2.1	1	23	479	501	479	501	0.98
12	20	0.0027	0.33	12.4	4.4	1	23	658	680	658	680	0.98
13	20	3.2e-06	0.00039	21.6	1.1	1	23	698	720	698	720	0.98
14	20	2.6e-05	0.0032	18.8	2.4	1	23	726	749	726	749	0.98
15	20	0.00039	0.048	15.1	6.0	1	23	759	781	759	781	0.99
16	20	4.3e-05	0.0052	18.1	1.8	1	23	787	810	787	810	0.98
17	20	0.00012	0.015	16.7	0.2	1	23	818	840	818	840	0.98
18	20	0.00059	0.071	14.5	2.5	1	23	846	869	846	869	0.98
19	20	4.7e-06	0.00056	21.1	0.7	2	23	880	901	879	901	0.97
20	20	4.3e-06	0.00052	21.2	5.5	1	23	907	930	907	930	0.98

Sequence Information

Coding Sequence: ATGATTTTGGGTCTAATCAAAACTGAGAGGACTGAAGATTGCGAAGCATCCACTTATGAGCAGTTAGAAGACGAAAATTTATCGGAAGTAGACGATAGTGGAATTATGAAGCAAGAAGTCTCTATCACACAAGAAGTTAAGCAAGAACACGAAATCGAGATAATggaaaatggcaactttagtgAAACGGACGATTTACAACATTCGACGTCACACAACGATACACCCAAAAACAATGGCAAATTTACTTGTAAGATATGTTCGAAGTTATTCGGTCGTAAAAATAGTTTGAATCAACATATGCGAATTCACACGGGTGAAAAACCGTTTCAGTGCGAAATTTGTCCTACCAAATTTCGATTTAAGTCGAACTTGACGTCACATACACAAACAGCACATTCCGCTAGCACAACGCATTCTAAGCAGTTTAAATATGCTATTTTGAAGCAATTAAAGGATGAAAGTATAAATTTAAACGATAATTTGAAACACGAATCAGAAGCTTCTTTTAAACTAATGAAAACGGAAGAGCTAGAAGACTATGAAACATCAAGTGATGAACAATTAGACAAAGAAATTTTAGCAGAATGTGTTCCGAAGCAAGAGATCTCTGTCATACAAGAATTTAAACAAGAAGCCGCAATCGAAATAAATATGGAAGTTATCGATTATAACGCCATTGATGCCGACGAGGAATCTACGGTTCATGACGATAAGACCACTACAAATAACAAGTACAGCTGCAAGTTATGTTCGAAAGTATTCGTTCGTAAACTTAATTTGAATCGGCATATGATTGTTCATACCGAAGAAAAACCATTTCAGTGCAAAATTtgtccaaataaattttcagtgAAGACTTCTTTAGTAGCACATATGAAAACAGCACATTCAGACCGACAGTTTAAATGTACGATATGTTCGAAATTAATTGGACGTAAAAGTTCTCTAGTTCAGCATATGAAAATTCATACCAGAGAAAACATATTTCAATGCGAAGTTTGTCCAAAGAAATTTGGATTTAAGCGCAACTTAATGGCGCATATGCGTGTTAAACATCCCgacaaaaccaaaaataaatgttcaatATGTTCGAAAACGTTTGGACGTAAAGTTGAATTGAATAACCATATGAAAATTCATACAGGAGAACGGCCATTTCAGTGTAAACTATGTCCCAGCAATTACCGATTTAGGTCGAATTTGGCGACACATATGCAAACGACACATTCCCCTGGAACAAATAGACCGTTTAAATGTACAATTTGTTCGGCATTATTTGTTCTAAAATATCAGTTGGATCAGCATATCATAACTCATACTGAAGAAAGACAATTTCAATGCGACATTTGTctaagaaaatttcaatttaagcaCTATGTAAAAAGACATATGTATAGGAACCATCCTGATGGAGTAACGAACAATAGAACCTTCAAGTGTACGACATGTACAAAAGCATTTGTATGTAAAGCTGATTTAAATCGACATATGATAATTCATACTGATGATAGACCTTTTCAGTGTGAAaTATCTCCTAATGATACTCTTCCGGACAACATCTGTAGGAATTGCCACGACAAAGTACATCAATCTTATGCTTTCAagttaaaatgtaaaaaaacagAAGCCTCTATGAAGCGAGTAAaagaagatagaaaaaatgtGGACAAGCTGGAAAATCCTCTCAATGAATATGACCACAAATCAAacaatcaaatcaaaaaagaaAAGGCTGACGATAGTTTAGCATTTAATAATGTACAATTCGAAGAGGAATATTTACCAGACGCTCTTGAGCATAACTTTACTAAACAAGAGATCTCTTTCGTACAAGAAGTAAAGCAAGAACCCGAAATCGACTTAAATATAGAAGAATGCGATTTCAACGAAATCGATTCAGATGAGTCGCGTCTTGAAAACGATTTTCCGGTATCGACTACGCCAGACGAAGCTGAAAATATTGGCAAGTTTAATTGTCCGACATGTTCGAAACTATTCGTTCATAAACATATTTTGAACGAGCATATGCGAACTCATACAGGAGAAAACCCAGTTAAGTGTAAAATTTGTCCATATACCGACCGCCGATTTAAATGTGCGACTTGTTCGAAACTATTCCGAACGAAGAGTGCTTTAAATCGACACATGATAATTCATACGGAAGACAGACCATTTCCGTGTGAAGTTTGTTCGCAAACATTTCGATATAAGCACGATTTAAAAGGTCACATGCAAACGACACATACCGACGGTACAACTGATAGTAGAAAGTTTCAATGTACGATTTGTTCGAAATTATTCCAACATAACTGTTCGTTGAATCAGCATATGAGAATTCATACCGGCGAAAAACCATTTCAGTGTGATGTTTGTccaaaaaagtttcgatttagACGCAATATGATGGAACATATACAAAGGACACATTCCGCaacgaataataaaaaattcgaatgTGCAATATGTTCGAAACTATTTGGAAGTAAGAGTGTTCTGAATCGTCATATGATAATTCACACAGAAGAACGATCGTTTCAGTGCGATATTTGTCTTAAGAAATTCGGGTTTTTGCATACTTTGAAAACTCATATAAAAATGGTACATGCCGACAAAACCACGAATAGTATAAAGCTAAAATGTTCGACATGTTCGAGAGTATTCGGTCGTAAATATGAATTAAATCGTCATATGATAATTCATACTGAAGAGAAACCATTTCAGTGCGATGTTTGCTCAAGGAAGTTCCGATATAAGTATCATTTGAAAAATCATATGCAAACAATGCATTCCGCTCAAATATTGTCCTGCTCATTATCATTATAA
Protein Sequence: MILGLIKTERTEDCEASTYEQLEDENLSEVDDSGIMKQEVSITQEVKQEHEIEIMENGNFSETDDLQHSTSHNDTPKNNGKFTCKICSKLFGRKNSLNQHMRIHTGEKPFQCEICPTKFRFKSNLTSHTQTAHSASTTHSKQFKYAILKQLKDESINLNDNLKHESEASFKLMKTEELEDYETSSDEQLDKEILAECVPKQEISVIQEFKQEAAIEINMEVIDYNAIDADEESTVHDDKTTTNNKYSCKLCSKVFVRKLNLNRHMIVHTEEKPFQCKICPNKFSVKTSLVAHMKTAHSDRQFKCTICSKLIGRKSSLVQHMKIHTRENIFQCEVCPKKFGFKRNLMAHMRVKHPDKTKNKCSICSKTFGRKVELNNHMKIHTGERPFQCKLCPSNYRFRSNLATHMQTTHSPGTNRPFKCTICSALFVLKYQLDQHIITHTEERQFQCDICLRKFQFKHYVKRHMYRNHPDGVTNNRTFKCTTCTKAFVCKADLNRHMIIHTDDRPFQCEISPNDTLPDNICRNCHDKVHQSYAFKLKCKKTEASMKRVKEDRKNVDKLENPLNEYDHKSNNQIKKEKADDSLAFNNVQFEEEYLPDALEHNFTKQEISFVQEVKQEPEIDLNIEECDFNEIDSDESRLENDFPVSTTPDEAENIGKFNCPTCSKLFVHKHILNEHMRTHTGENPVKCKICPYTDRRFKCATCSKLFRTKSALNRHMIIHTEDRPFPCEVCSQTFRYKHDLKGHMQTTHTDGTTDSRKFQCTICSKLFQHNCSLNQHMRIHTGEKPFQCDVCPKKFRFRRNMMEHIQRTHSATNNKKFECAICSKLFGSKSVLNRHMIIHTEERSFQCDICLKKFGFLHTLKTHIKMVHADKTTNSIKLKCSTCSRVFGRKYELNRHMIIHTEEKPFQCDVCSRKFRYKYHLKNHMQTMHSAQILSCSLSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -