Basic Information

Gene Symbol
Zbtb41
Assembly
GCA_951812415.1
Location
OX638311.1:13225486-13239327[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 5.7e-06 0.00069 20.9 0.5 2 23 179 200 178 200 0.97
2 28 3.7e-06 0.00045 21.4 0.8 1 23 206 228 206 228 0.99
3 28 7.1e-05 0.0086 17.4 1.7 1 23 234 257 234 257 0.98
4 28 0.001 0.13 13.7 2.1 1 23 267 289 267 289 0.98
5 28 8.6e-05 0.01 17.1 3.9 1 23 295 318 295 318 0.98
6 28 1.1e-05 0.0013 20.0 1.8 1 23 328 350 328 350 0.98
7 28 7.8e-06 0.00095 20.4 0.2 1 23 355 378 355 378 0.96
8 28 0.079 9.6 7.8 1.0 1 23 384 406 384 406 0.98
9 28 1.2e-06 0.00015 23.0 0.7 1 23 412 435 412 435 0.98
10 28 7.2e-05 0.0087 17.4 0.1 1 23 611 633 611 633 0.99
11 28 0.0014 0.17 13.4 0.0 1 21 639 659 639 660 0.95
12 28 3.3 4e+02 2.7 0.4 15 23 660 669 659 669 0.94
13 28 2e-05 0.0024 19.2 0.8 1 23 679 701 679 701 0.99
14 28 0.0049 0.59 11.6 0.6 1 23 707 730 707 730 0.97
15 28 0.0072 0.87 11.1 1.1 1 23 738 760 738 760 0.98
16 28 0.00034 0.041 15.3 0.8 1 23 766 789 766 789 0.94
17 28 3.1e-05 0.0038 18.5 3.8 1 23 799 821 799 821 0.98
18 28 0.12 14 7.3 3.8 1 22 827 848 827 848 0.95
19 28 1.6e-05 0.0019 19.4 3.9 1 23 1008 1030 1008 1030 0.99
20 28 0.00041 0.05 15.0 0.8 1 23 1036 1059 1036 1059 0.98
21 28 0.015 1.8 10.1 1.0 2 23 1070 1091 1069 1091 0.96
22 28 2.6e-05 0.0032 18.7 1.4 2 23 1096 1118 1096 1118 0.97
23 28 3.2e-05 0.0039 18.5 3.1 2 23 1129 1150 1128 1150 0.97
24 28 9.2e-06 0.0011 20.2 1.1 1 23 1156 1179 1156 1179 0.96
25 28 0.00025 0.03 15.7 2.9 1 23 1189 1211 1189 1211 0.99
26 28 3e-05 0.0037 18.6 4.3 1 23 1217 1240 1217 1240 0.98
27 28 4 4.8e+02 2.5 0.1 12 22 1244 1254 1243 1254 0.86
28 28 0.00013 0.015 16.6 0.6 1 23 1261 1284 1261 1284 0.96

Sequence Information

Coding Sequence
ATGAATTTCAATGAAGTGTGCAGAACTTGTTTGGTGCCCAGCGAAACTATGCAGTCTATTTTTAGTGGAATTAAGGTGCCAAATCTAGAATTGCTAAAACTTCCCATTCTTGATTTGTTAAAAATCTTCACGAACATCTCGGTGTCTATTAACGATGGTCTTCCCGATAGCATTTGTAGTGACTGTCTCGATAAAGTACATCAATCGTATACATTCAAATTAACATGCGAAAAATCAGAAACTCTATTAAAGCAATTAAAGGATACTAGGGAAAATATGAACGAGTTGACAAATTCTCCCAACGAATATGGACAATATACCAAATCGCCTAGTGGACTCTTCAAAACAGAAAATCCAGAAGATTCTGAATCATCCAATGTCGAACAATTAGAACAAACTAGTCCATCGGAGACTTCTGAACAAGGGACATTTCTCGTACAAGATGTAAAAGAAGAACCTGAAATCGAGATAATTATGGAAGATGGCGATTTAAATGGAACTGCTTCCGACGAGGAACGGCTTAAAGAAAATATACGATGTTCGGTTTGTCCAAAAGTCTTAAGGAACAAAAGAACTTTGAAGGCTCATATGCGAATTCATACTGGTgatctaccatacaaatgtgaaatttgcaCAAAAGCGTTTGGTGGAAAACACGCCCTAATCCGACATATACGAAGTCATACCAAAGAGAGACCatttaaatgtgaaatttgtgaaaaaaatttccggTGTAAATGGGATTTAAATGCCCATATGCAAACGGCACATTCCGATGGAACCgagattaataaaaaatttgaatgtaCGACATGTTGCAAACTATTTGATCGTCAAAGTGATTTGAATCGGCACATTATAGTTCACACCGAAGAAAAGCCATTTCAGTGTGAAGTTTGTCTAAAAAAATTCCGTTTTAAGCACAATTTAAGAGCTCATAAGCAAACGGCACATGCCGATTTAGCCGCGGACACCAAGAAATTTAAATGTGCAACATGTTCAAAATCATACATAAGTAGCTATTATTTGAATAAACATATGCAAATTCATTCGGAAAGGCCGTTCCAATGCGAAGTTTGTCCGAAAAATTTTCGCTATCAGGATAGTTTGAATGGTCATATGCAAGCGGCACATGCCGATGGAACAAAATTCAAATGTGCAATATGTTCGAGATTGTACTTGAGTAAAAGTATTTTGAAAAGACATATGAAAGTTCATACAGCAGAAAGACCATTTCAGTGTGATATTTGCCCGAAAAACTTTCGatacaaaaacaatttaaaaggaCATATACAAACTGCACATGCCGATGGAGTAACAAATAATAGCAAGGATAATCCGACCAAAACTATGCTGTCCGTTTTTAGTTCGATCGAAGTGACAAATTTGCAATTGCCAGAACTTCCCATTCTTGACTTATTGAAAATCTTCACGGAAATTTCGGTATCTCCTGACGATGGTCTTCCCGAAAACATTTGTAGCGATTGTATCTACAAAGTACATCAGTCGTATATTTTCAAGTTAACATGCGAAAAATCCGAAACAATTTTAATACAATTAAAGGACACTAGGAAAAATATGAACGAGTTGACAAATTCTCTGCGCGAATACCACTATACTGAAACGAGTGATGCAATCatcaaaacagaaaatttaGAGGAATATGAATTTACAAATGCAGAAGAATTCGATCATGATAGTATATCAAGGATCTTAGAGCAAGAGCTGTCTCTCGTACAAGAAGTGAAACAAGAacccgaaattgaaataaagATGGAAGATGTTGATTTTGATGGAAGTGAATTCGACGAGGAATGTTGTAAAAACGAATTCCAATGTACTGTTTGTCCGCTAATTTTAACGAATAGCTCAACACTGGAAGCTCATCTAAAAATGCATAGTGGCGATCTACCACACAAATGTAAAATTTGTGCAGAAGCGTTCGCTGAAAATCACGCATTAATCAGGCATATGaTCAATTTGGAGAATCATATGCGCACAGAACATGGCGATGGAACAACCGagacaaataattttaaatgtgaAACATGTTCGAAATTATTCGGTCGTCTCGGTGATTTAAATCGACACATGAAGATCCATCGGGCCGAAAATCAACATCAATGCGAAGTTTGCTTAGCCACTTTTCGATTTAGAAAATCGCTGGAAGGTCATATCATAACAGTTCATGCTGAACACGGAGCAAATTTATTTAGATGTTCGATATGTTCGGGTCTACGCAAAAGTCAAAATGATTTGAATCGTCATATGAGGCTTCATACAgttgaaaatcaatttcagtgtGAACTTTGTCCGAGTAAATTTCGATTTAAGACGAATTTAAAAGATCATATGGATGCAGAACATTCGGACGGAACAAAAGATCGTTGTACGTTTACATGTCCaacatgttttaaaattttcggtCGTAAGAGTCATTTGAATCGTCATTCGAAAATTCATGCTGCCGAAAAACCATTTCATTGCGAGTTTTGTTTAGATAAATTtcgatttaaatataatttacgaACGCATATGCAAACCGTATCTCCTGATGATGGTCTTCCCGAAAATATATGTTGCGATTGTCTCTACAAAGTATATCAGTCGTATACTTTCAAATTAAAGTGCAAACAATCAGAAGTCATTTCGAAACAACTAAAGGATGATAAGGAAAATATGAACGAGTTAACAAACCCTCCCAACGAATATGAGCACTATACTGAATCGAGTATTGCtcgaattaaaaaagaaaaggtAGAATATTGTGATCCATCAAATACAGAACAAGATAGGTTATTGGAAACTTTCGAGCAAGAGGTGCCCTTTGTACAAGAATTACAGCAAGAAGGTGTCGATTTTAATAGAACTGACTCGTACGAGGAACATTCTAAAAACCATATACAATGTTGGATGAAACCGAACAAGTGCGAAATCTGTATACAAAACTGTCGACGTAAGTACAATATGAAAAGTCGTACTACAATGGAAGATGTCGATGAAGTTGTAAATAACGACAAGTTTAAATGTGCGACATGTTCAAAATTATTCGGACGAAAAAGCCATTTGAATCGTCATATGAAAATTCATTCTGCGAAAAAACCATTTCAATGCGAAATTTGTCTAAACAAATTTCGATTCAAAATGAATTTGGTGGATCATATGCAAACGGCACATTCCAATAGAAAAACAACTAATCGGAAGTCGAAATGTGTAAAATGTGCGAAATTATTCGGTAGTAAGAGTGATATGAAGTTACATATGAAAGATCATATCCAAGAAAATCGGTGTGAACTTTGTCAAAGAAAATTTCGTTCGAAGTCGACCCTAATCGATCACATGCAAAGCGTACATGTCAAGGGAACTATAAAAAATAGCAATCTTAAATGCACGGTATGTTCGAAATTATTCGGATATAAAAGTCATTTGAATCGTCATATGAAGATTCATTCGACAGAAAAACTATTTCAATGCGCTATTTGTcagaaaaattttcgatttaagAACAATTTGAAAGATCATATGCAAGCTGTACATGTCGATGGAACAACGAATAGTATACAGTTTAAATGTGCGATATGCTCAAAATTATGCATAAGTAACTATTATTTGAATAGGCACATGAAAATTCATACAGCCGAAAGACCCTTTCAATGCTATGTTTGTACAAAACATTTTcgatataaaaacagtttgaaaGTACATATGCAAACGGCACATGTCGATGTGGATAAACGTGATTTGAAAAGGCATATGAGAATTTATACAGACGAGATACCATTCCAGTGCGAAGTTTGTCCAAATAAATTCCGCTTCAAGAACAATTTGAATGATCATATGGTAAGTGTACATAACGATGGAACAATGTAA
Protein Sequence
MNFNEVCRTCLVPSETMQSIFSGIKVPNLELLKLPILDLLKIFTNISVSINDGLPDSICSDCLDKVHQSYTFKLTCEKSETLLKQLKDTRENMNELTNSPNEYGQYTKSPSGLFKTENPEDSESSNVEQLEQTSPSETSEQGTFLVQDVKEEPEIEIIMEDGDLNGTASDEERLKENIRCSVCPKVLRNKRTLKAHMRIHTGDLPYKCEICTKAFGGKHALIRHIRSHTKERPFKCEICEKNFRCKWDLNAHMQTAHSDGTEINKKFECTTCCKLFDRQSDLNRHIIVHTEEKPFQCEVCLKKFRFKHNLRAHKQTAHADLAADTKKFKCATCSKSYISSYYLNKHMQIHSERPFQCEVCPKNFRYQDSLNGHMQAAHADGTKFKCAICSRLYLSKSILKRHMKVHTAERPFQCDICPKNFRYKNNLKGHIQTAHADGVTNNSKDNPTKTMLSVFSSIEVTNLQLPELPILDLLKIFTEISVSPDDGLPENICSDCIYKVHQSYIFKLTCEKSETILIQLKDTRKNMNELTNSLREYHYTETSDAIIKTENLEEYEFTNAEEFDHDSISRILEQELSLVQEVKQEPEIEIKMEDVDFDGSEFDEECCKNEFQCTVCPLILTNSSTLEAHLKMHSGDLPHKCKICAEAFAENHALIRHMINLENHMRTEHGDGTTETNNFKCETCSKLFGRLGDLNRHMKIHRAENQHQCEVCLATFRFRKSLEGHIITVHAEHGANLFRCSICSGLRKSQNDLNRHMRLHTVENQFQCELCPSKFRFKTNLKDHMDAEHSDGTKDRCTFTCPTCFKIFGRKSHLNRHSKIHAAEKPFHCEFCLDKFRFKYNLRTHMQTVSPDDGLPENICCDCLYKVYQSYTFKLKCKQSEVISKQLKDDKENMNELTNPPNEYEHYTESSIARIKKEKVEYCDPSNTEQDRLLETFEQEVPFVQELQQEGVDFNRTDSYEEHSKNHIQCWMKPNKCEICIQNCRRKYNMKSRTTMEDVDEVVNNDKFKCATCSKLFGRKSHLNRHMKIHSAKKPFQCEICLNKFRFKMNLVDHMQTAHSNRKTTNRKSKCVKCAKLFGSKSDMKLHMKDHIQENRCELCQRKFRSKSTLIDHMQSVHVKGTIKNSNLKCTVCSKLFGYKSHLNRHMKIHSTEKLFQCAICQKNFRFKNNLKDHMQAVHVDGTTNSIQFKCAICSKLCISNYYLNRHMKIHTAERPFQCYVCTKHFRYKNSLKVHMQTAHVDVDKRDLKRHMRIYTDEIPFQCEVCPNKFRFKNNLNDHMVSVHNDGTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-