Basic Information

Gene Symbol
CDC5L
Assembly
GCA_951812415.1
Location
OX638312.1:53239955-53241034[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-17 2e-14 54.3 1.8 2 46 9 54 8 54 0.97
2 2 1.3e-12 2.4e-09 38.1 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCACGAATTATGATTAAAGGAGGAGTGTGGCGGAACACAGAGGATGAGATTTTGAAGGCGGCTGTCATGAAATATGGCAAAAATCAGTGGTCCAGGATAGCTTCACTTCTTCATAGGAAATCTGCGAAACAGTGTAAAGCTCGATGGTACGAGTGGCTTGATCCTAGTATCAAAAAGACGGAATGGTCTCGCGAAGAGGATGAAAAACTTCTGCATCTTGCGAAGTTAATGCCTACACAGTGGCGAACTATTGCACCTATTATTGGTAGGACGGCTGCTCAGTGTTTGGAGCGCTATGAATATCTTTTGGATCAGGCACAGCGAAAAGAAGATGGTGATGACTCTGTCGACGATCCGCGAAAACTCAAGCCGGGAGAGATCGACCCAAATCCAGAAACAAAGCCTGCTCGACCTGATCCAAAGGACATGGATGAAGATGAGTTGGAAATGTTATCGGAAGCAAGGGCTCGCCTTGCGAACACCCAAGGCAAGAAGGCAAAAAGGAAAGCTCGTGAGAAACAATTAGAAGAAGCGAGGCGATTGGCTGCCTTACAAAAACGTAGAGAATTACGAGCAGCTGGAATTGGTTGTGGAAATCGAAAGCGACTCAAAGGTATCGATTACAATTCTGAAATACCATTCGAGAAAAGACCGGCACTCGGATTTTACGACACTTCGGAAGAAAGTATAGAGAAAATGGAACCAGATTTCAATAAAATGCGTCAACAAGACTTGGACGGCGAACTTCGGGTTGAACAGGAGGAGCGTGAACGCAAGAAAGACAAGCAAAAGTTAAAACAGCGCAAGGAGAATGATATGCCTTTAGCTATGCTGCAAAATCTAGAACCAGCAAGAAAGCGATCCAAATTAGTGTTGCCGGAGCCCCAAATTTCGGACCAGGTAAGATGTTAA
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQRKEDGDDSVDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIGCGNRKRLKGIDYNSEIPFEKRPALGFYDTSEESIEKMEPDFNKMRQQDLDGELRVEQEERERKKDKQKLKQRKENDMPLAMLQNLEPARKRSKLVLPEPQISDQVRC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00202510;
90% Identity
iTF_00202510;
80% Identity
-