Bmor001918.1
Basic Information
- Insect
- Beris morrisii
- Gene Symbol
- -
- Assembly
- GCA_951812415.1
- Location
- OX638310.1:45968086-45975297[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2e-12 1.6e-09 38.2 0.1 3 43 258 298 256 299 0.92 2 3 0.35 2.5e+02 2.4 0.0 28 38 329 339 328 345 0.88 3 3 4e-15 2.9e-12 47.0 0.0 3 38 364 398 362 401 0.94
Sequence Information
- Coding Sequence
- ATGAACCACTTAAAATGGATGTCGCATTCAGCGACAATAATGGAACTTCAACGAAGTTTGCATAAGGACAACAGCAGCTGCGATGTTCTAGTCGCGACCGGAAAAGGCTCCGTGTTTCGAGCGCACCGTTTTTTACTTTGCTTCTCGAGCGACTATTTCAAGGAAATGTTCCGCGACATTCCCTTGCACCAGGAAGTTACCGTTCTCGTTCCGGATGTGCGTCCGAGCATTCTCAAACATATTTTGAGTTTCATTTATAAAGGGGAGGTGTGCGTTAGTTCGGCCGATCTGTCCGATTTTCTCGAGAATGTCAATTTGCTGGGCATTAAGAGTGCCATCAGTTTTGAGTGTCACGTGAATAAACAGAAGCCGCATCATTTCAAGGAGTTAACAATCGAGCCGGTGGTCATCGAGGATGAGGTGCAGCAGACAAATGTCGGTCCAAAAGTGGAGGAGGAATCAGACGGCCAGCAGAGCTCAAAAGACTTTGAATATTTGGATGTCTACAATCCAGACGAAAAAATGCCACAGTACACAATTGAACACACGAACAACGACTACATCCTAACCGAAAACACCGAATCAACATTTGTACTTCCCGTCGTAAAAACCGACAATGAAATCACACTGAAAGAACAATACACCGGCGAAATGCAAACCGATGCAGACGAACCGGAAATCGATCAAACACCTCCGGAAACTTTCAAAGAAGAAACCAAAGAGAAACCATTCAAACCGGAATCGGAATGTGTTCTGACGCCGTCACGAAAGGCAGCGTTCGATGCAGCAGTTCGTGATGTTCTTAATTTCGGTGTTAGCCTACAGAAAGCGGCGACAACGTACAACATATCGAAAACCGTACTTTGGCGAAGATTACGAAAAAATTCATCGTATAAAATCGAACGCGAACATCCAATGCTTAATTCGGCAATTGCAATGCTTGAAAAGGGCGATTCATTGAAGTCGATTAGTCAATCGATAAAAATTCCGATCTCAACGTTGCACCGACACAAAGTTCGTTTGTTGCAAGAGGGCCGACTTCCCGATCATGTACAAGTGAAACGACGCGATACAAAAGATAATTTAAAAGAACGATTGTCGGACGCAATTAGCGCTTGTTCGCGCGGTATGTCGCAAAATCAAGCGGCCAATGTCTACTCGGTCCCGAAATCGACGCTATGGCGTCACCTGCAGAAACAGTCGCTTAACGTGAAAATCGCAACCGATATTGTTGACGAGATCTCTATATCAAGTTAA
- Protein Sequence
- MNHLKWMSHSATIMELQRSLHKDNSSCDVLVATGKGSVFRAHRFLLCFSSDYFKEMFRDIPLHQEVTVLVPDVRPSILKHILSFIYKGEVCVSSADLSDFLENVNLLGIKSAISFECHVNKQKPHHFKELTIEPVVIEDEVQQTNVGPKVEEESDGQQSSKDFEYLDVYNPDEKMPQYTIEHTNNDYILTENTESTFVLPVVKTDNEITLKEQYTGEMQTDADEPEIDQTPPETFKEETKEKPFKPESECVLTPSRKAAFDAAVRDVLNFGVSLQKAATTYNISKTVLWRRLRKNSSYKIEREHPMLNSAIAMLEKGDSLKSISQSIKIPISTLHRHKVRLLQEGRLPDHVQVKRRDTKDNLKERLSDAISACSRGMSQNQAANVYSVPKSTLWRHLQKQSLNVKIATDIVDEISISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00203702;
- 90% Identity
- iTF_00203702;
- 80% Identity
- iTF_00203702;