Bmor020982.1
Basic Information
- Insect
- Beris morrisii
- Gene Symbol
- -
- Assembly
- GCA_951812415.1
- Location
- OX638312.1:78439983-78447214[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.3e-11 3.8e-08 33.8 0.0 1 38 212 250 212 255 0.91 2 4 2e-13 1.4e-10 41.6 0.2 2 39 267 304 266 307 0.94 3 4 1.5e-17 1e-14 54.8 0.0 1 45 321 366 321 366 0.98 4 4 5e-18 3.6e-15 56.3 0.0 1 43 373 416 373 418 0.96
Sequence Information
- Coding Sequence
- ATGACCAGTCTAGGAATGGGAATGAACGGTGGTCTTCTAGGAGTGCCAATGGGCTTCCTTGATTTCGCACCGGAACCACCAGCTCCGTCGGCAACACCCGTCACAGAACATGTTGACATGTCCTGTACACCCAGTACTGATACACGAGACTTATCAAATCCCAACGAAACGCTCGATATTGACAATCATATAGCACAACATATAATCCATCGATTAGATCATTCACCAATGCCTCAGATGCAACATCAGACTACTTCGGACGAGagcaattcaaatttaatacaaaatataaaaacggAAGTTGTTGAAAAACAACATCATCATCACCATCAGCAGCAAcatcaacagcagcaacaaatGCAAGGTCAATCGCAACAGCAGGCTCATCATCAGGATATGTCTGGAAGTACTGTAATGGAAATTGATCCGAACAATATAAAACACGAACCAGCTATGATAATCACTCCAGAAATCGTAACAATGATGACTTCGGGGCATATGGACATTTACAATTCAGACACTAGCGAAGATTCTCTTATGATAGCAAATGGTTCACCAAATGACAACAATGAGCCGCATTATACGAATCTTGATCAACAAAACGATTTAAAATTGAATATCCCGAAAACGTGGACGCCGGAGGACATGAGTTCCGCATTAGATGCGTTGAAAAATCATAATATGAGCCTAACGAAAGCATCCGTAACGTATGGAATACCATCGACAACACTTTGGCAACGTGCTCATCGCATGGGCATCGATACGCCAAAAAAAGAGGGCACGACAAAATCGTGGAATGAAGAAGCCCTAAATAGTGCGCTAGAAGCTTTACGCACGGGTCAAATATCCGCCAATAAAGCATCGAAGGCGTACGGAATTCCGTCCTCAACTTTGTACAAAATTGCCCGACGTGAAGGAATTCGATTGGCTGCACCGTTCAATGCAGCACCGACCACATGGACGCCAGAAGACTTAGAGCGTGCATTAGAAGCTATACGAGCTGGCCATACATCCGTCCAAAAGGCTAGCACTGAATTTGGTATTCCTACAGGAACACTTTATGGAAGGTGTAAACGTGAAGGAATTGAGCTGTCTCGGTCCAATCCAACACCTTGGTCAGAAGACGCTATGAATGAAGCCTTAGTCGCAGTGagAGTTGGCCACATGTCCATAAATCAAGCAGCTATTCACTATAACTTACCATACAGTTCTTTATATGGACGATTTAAGCGTGGGAAATACGATACGGGCACAGGTGTGGGCTCTGCGAACAACAGTGCAAATACTTCGGGAAATTTAGAATTGATTGAACATAGTCCTGAAAATTCGTTGCAAATGTTTCAGCAGTTCCAGTACAGCCCGGGTCCATCTACAACTCCGCAGcatcaacaacagcagcaacagcaacagcaacaacaacatcagcaacagcaacaaccgcAAATTCaccatcaacaacaacaacaacaacatcaacagcaacaacagcagcagcaacagcaacaTCATCAGCAACAACAACATCACCTCCAACAACATCCTCAACATCAACAGCATCAACATCCACAACAACAGCACCTTCAGCAGCTTGACGTTGTCACGTCGAGTAGTCAAGTTCATACGCAAACGGGACAAATCCAACAAATTTACCACCATCACAGCACACCAGAAAGAAGTTGA
- Protein Sequence
- MTSLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTEHVDMSCTPSTDTRDLSNPNETLDIDNHIAQHIIHRLDHSPMPQMQHQTTSDESNSNLIQNIKTEVVEKQHHHHHQQQHQQQQQMQGQSQQQAHHQDMSGSTVMEIDPNNIKHEPAMIITPEIVTMMTSGHMDIYNSDTSEDSLMIANGSPNDNNEPHYTNLDQQNDLKLNIPKTWTPEDMSSALDALKNHNMSLTKASVTYGIPSTTLWQRAHRMGIDTPKKEGTTKSWNEEALNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALVAVRVGHMSINQAAIHYNLPYSSLYGRFKRGKYDTGTGVGSANNSANTSGNLELIEHSPENSLQMFQQFQYSPGPSTTPQHQQQQQQQQQQQHQQQQQPQIHHQQQQQQHQQQQQQQQQQHHQQQQHHLQQHPQHQQHQHPQQQHLQQLDVVTSSSQVHTQTGQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -