Basic Information

Gene Symbol
ct_1
Assembly
GCA_951812415.1
Location
OX638311.1:67182480-67276462[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.9e-26 1.6e-22 80.2 0.0 3 71 786 855 784 861 0.94
2 3 1.1e-31 9.4e-28 97.0 0.0 3 77 1232 1307 1230 1309 0.96
3 3 1.9e-30 1.6e-26 93.0 0.0 3 76 1433 1507 1431 1510 0.96

Sequence Information

Coding Sequence
ATGGAACAATTCCGTTTAATTGATTCGCTTGAAATTCAGTTCAAGCGAGCTACCCTAGCTGAAAAAGAAGTGAACACACTAAAAGAACAACTATCGGGATCGACAACAACGTCACCATTATCACCAACGACCCCATCAACAACTAACAGTCTTTCAACAATATCACCATCAACAACAACGGTAACAGCATCAGCCATACTTGCTGCTGTTTCACCAACACAAGCCGTCTCAGCTACGGCTACCGTCGCAACAGTACCAAATAAAATAACGCTtaacaacaataataacaacaacaacaacatcaatAGTAATAATAACAACACCAATAGTAAAACCACAGTAAATAGTTTTGCTATAACACAACAAAACGGTCTACCATCGCCGGCTTCATCGCCGCCATCATCGAATTGTGGTAGTACGACAACAACACCGCCAACGACAACACCAATCACCAACAATTGTATTGGTGTCGGCTTAAATCTACTACCGAATTCCGTCACAATTGCAACAAATTTATTAAGCAGTAGTACTACAACTCCGCCGgcattaaataaattactccatttaaataataataaaatggacGATGGCAACAGTATGACATCGTTGACATCGATGACGGCCGATATAAAATTGGAGGAACAAttgcataataataataacaatagtaACAGtagtaacaacaacaataataataacaatagtgCGAATAGTACGAGTAATTTAATTCGATCGAGTACACCAATCGAGAATAAAAGTAATACAAGTGCGGATTGTCCGAGTAATTTAAGTAATGTAAATAGTAATAGTAATAGTTGTAACACTAGTAACAATAATAGTAGTTCAAATAATAAATCAACATCAGCAACAACATTAGTGGATGAATTAGCTGCCAAAGACAAAGAGATCAAAGCATTAATCGATGAGGTAACACGATTGACCGCCCTCCAAGAATCACACATTGTACAAATACAAAGACTCGAGGAACGTTTAGAAGTTAAGCGCCAGCATATACAAAGATTAGAATCACGTTTACGAAGTCAATCATTGAATTTGGTGGACGAtgatgtaaaaaaagaaaatagcaATATAATTCCAACATTGGATATAACAAGTCCAGCAGTAGCTGCAGCCGCAGCAGCAGCTGCAGCTTCGGCTGCTACCGACGCGAAACAATTTCAAGAATTACTTCTGGAACAAACCAAAGCCTTAGCAGCCGCACAAAATGAAGCACTAAAATCCAGCTCAAGTTCGGACGGATCAGCAACTCCACTTCAAACTTGTAAATCTCAAACGTCGTCATTGGTCGAACAATCCACCACACCATTGACAACAACCGCAGCAACAACAATGAATCGATCGGCCGATGTTTCGTCGCCAATCAATCACAACATCAACAACACCACCAGTCCGCCGACTATTAGCAACAAGTTGTCCTCCACAACTCCGCCAAAAACCAGAACAATAAGCCGATCAGCAACAAGTACCCCATTCGGTGGTTCGACATTTCCCGTTGCCGCCCCTGGTGTCGGCCATTTTGCAAATAATTCCACCACTATTGGTGGCGGTGAATGCAGTCGCGATAATCAAAACTCACCACATTCGAGCAATGGCGGCGGCAGCGGTGGTGGTAGTAGTGGTAGCAATTTCCACAATGTCGAACAATTCGGTTCGTTTTTGGGCGAAGAGATCGTGAGCAATTGGCGTCGCGGTTTCGAACTTCCACCGCTACCATTGGCGCCACCGTCGATAGCTGTTACATCGGCGGCCGCAGCGGCAGTTGCTGCAGCGATTGCAACTCAAGCGACAACGCCAATACCCTTTCAGGCGATGCCGCCATCGACACGACCGTCAACCGCCCCATCGACCACCACCCTACTCAGTCAATTGGTTAACTCGACATTTTCTAATTCTCTTCAAACAGATACGAACAGTGGCGTCGTGGCGGGAAATTTGAATAATTGCCATCAGGACAATATGGACAAGGCGAGTAGCCATCACGACAATTCGTCGACGGCCAGTACGCCCAATTTACAAGATTCACGTTCGATCGACGAACATATGAACGGAAGTTGCGGACCGGGCGGTCTAACTCCCATGTCCTTGCAAATGATGAAAAATCAGGCCGAGGATAACAACAATACGCTCGGATCGCTACCGCACGTTCCGGCCGGCTTTCTACCCGGCCTTCCGTTCCAATTCCAAGATCGTGGTCATTTTCGTTTTGCCGAGGATCTCCAAATGCCACCGGGTTCGATGGCTGGCCGACTTGGCGAGTCCTTGATACCAAAAGGCGATCCGATGGAAGCCAAACTCCAGGAGATGCTACGCTACAACATGGACAAATATGCCAATCAAAATCTGGACACGCTACACATATCACGACGCGTTCGCGAACTTTTGTCCGTTCATAATATCGGGCAGCGTCTATTTGCCAAATACATCCTTGGATTGTCGCAGGGTACAGTGTCCGAGCTCCTGTCCAAACCAAAGCCCTGGGATAAATTGACGGAAAAAGGACGAGACAGCTATCGGAAGATGCATGCCTGGGGCTGTGATGATAACGCCGTGCTCCTGCTGAAGTCATTGATACCGAAAAAAGATTCCGGTATGCCACAGTATGGCCGCTCCGATGACTCCATGTCCGACGATAGGCTTGCTCACATCCTAACTGAAGCATCAAATCTAATGAAGACTCCGCAAGGACATAATCCTGCACATCTGCATCACCaccagcagcagcaacaacatcaGCAGGCCACTCAGCAATTCCAACAAGCCgctcaacaacaacaacagcagcatcAGCAACATCAACAACAGCTCCAGCAGCAACAGCTCCAAAGTCTTCATCAATCCTCGTCCGGCCAGGAAGATTCGCACAGCAACGAAGACTCCAAGTCACCATTGAATGATAGTCCCTCCCCGTTCTACAAGGATGCTCTTCAACGGCGCATCAAAAAGTACGATAACGACGACATCCCACAGGACAAAGTGGCCCGGATCTATCAGGAAGAACTGGCCAAACTGATGACACGCGGTCCACGAGACGCTTTTCAAAGTTTTCTCTTTCCACACTTTTTTAGTGGTGGCATGCCACCAGCAGCAGCGGCCGCAGCCAACCAACCGATGCCCGACGAAAATATCCGAATGGCACTCGAAGCATATCATAGGGAGCTAGCGAAGCTACAACAAACTGGCGGAGCCATTCCGAATTTCCCAAATCTTCCAGGACTACTTGCACTCCAACAGCAGGCTTTAAACGGTGCCCAGGATCTGTCCTGCAAGAAAGCGGAAAAAGTGATGAAACTCAACGGTCAGCAGCAGAACTCCTTTTCCATGGACTCGTGCGACCAAAGTACCAAAGATTCCACCACTACCGTAGAGGATGCGTTACGGCATTCGAGTGCATTTAGTCTGGTTCGACCGAAACAGGAGCCCGGGACACCGGCCCCCAATAATGTCAATACGAATGCATCGTCGACCGCTCCCAGTCCGCTCGGTAACTCAATCCTTCCGCCTGCAATGACACCGAACGATGACTTCTCTTCGGCTGCAAGCCCCCTCCAAAGAATGGCATCGATCACCAACTCCTTAATCACACAGGCACCGGTTCAGCCGCACCACTCAACCCCGCAACGACCAATGAAGGCAGTTCTTCCACCAATCACTCAGCAACAATTCGACATGTTCAACAATTTGAATACTGAGGATATTGTCCGGCGTGTAAAAGAAGCTTTGTCCCAATACTCGATCAGTCAAAGATTGTTTGGTGAGTCCGTACTTGGTCTATCGCAAGGATCTGTTTCAGATCTATTGGCGCGACCGAAACCATGGCACATGCTCACACAGAAAGGACGTGAACCCTTCATCCGAATGAAGATGTTCCTCGAGGACGATAATGCCGTTCACAAGCTAGTCGCAAGCCAATATAAAATTGCACCGGAAAAGCTTATGCGAACCGGAAACTATAGCGGAAGTCCCCAGATACCAACCGGACTTAGTCAGAAAATGGTCCCGATGCAAAAAATGATGAACGAAATGAAGATGCAGGACGCTCCACAGCATCTGATGCAATTGCAAGCTTCCGTCATGGCTCATATTCCATCGTCTCAACATCAAGGCATGTTGTTGACACCGCCCGGACTTCCACCTCATCATGCCATCAATCTTCCAACGCACAACGAGAAGAAACCCATGATGATGCCATCGGTCCATTCGCCACAGCAAAACAACGCTATGCGTGGCATGCACCAACACATGTCGCCAACTGTTTACGAAATGGCTGCCTTAACTCATGATCTCGATACGCAAGTTATCACAACGAAAATCAAGGAAGCCCTGCTGGCCAATAATATCGGCCAGAAGATCTTCGGCGAAGCTGTTCTGGGACTGTCACAAGGTTCCGTTTCAGAACTGCTATCGAAACCGAAACCGTGGCACATGCTTAGCATCAAGGGTCGCGAACCATTCATCCGGATGCAGCTATGGCTGTCTGACGCTAATAATGTCGAAAGGCTGCAAGCAATCAAAATCGAGCGAAGGGAAGCTAGCAAACGAAGACGCTCTACGGGACCGGGAACCCAGGATAACAGCTCGGATACAAGTAGTAATGACACTGCTGACTTCTATACCAGCAGTCCGGGACCAGGATCGGTAGGATCAGCTGGCGTTCCGCCAAACAAGAAGCAGCGAGTTCTATTCTCCGAAGAACAGAAGGAAGCTTTAAGATTGGCATTCGCCCTAGACCCATATCCAAATGTAGCCACCATTGAATTCCTTGCGAGTGAGCTTGCTCTGGCCACAAGAACGATAACGAACTGGTTCCACAACCATAGGATGAGGTTAAAACAACAAGTTCCACATGGCACGCCAAGCGAACCGGTTCCAAGTAGAGAGAATCAGTCAGGAACACCGTTCGATCCGGTCCAGTTTAGAATTCTGTTGAACCAGCGTTTGATGGAACTTCAGAAAGAACGTATGGGTCTGAGCGGAGTGCCGATTCCCTACCCACCTTACTTTACAACAAACCCCAATCTGGCCGCGTTGATCGGGCGAGGACTGCTCCCGGGCAACGAACCCAGCTTAGCTGCCCTGAACAACGCTTTCAAGGAGCAGATGAGTGGCTTAGATCTGACCATGAACGCTCTGAAGCGCGAACGCAACGACGATTTTGACGATGACGGTGAAGAAGAGAGTCATCTATCGGACACCGAATCCATGGACGGGTCCGATAACAAGTCCGAATTGAAAGAAACCCCCACATCATCCCGACTATCCGGCTCAACGCTCGGACAGTCGCGAACGTCACGTCGAAAACCGGCCGCCCCACAATGGGTCAACCCCGACTGGCAAGATGGCACTACCGGTCATCCACCGATCGGAGGACCCATTACCGAACCCGaggtcatcatcaatggcgtttGTGTGATGCAGAACCAAGCTGCCGACTACAGCCGAAAAGCGGGCAGCGAAGAAACCGTCCGAGTCGAACCGACCGATGTCCAGGATCATCATCAATTCATCGATGACGATGCCGAAGATGAGCTCGGCTCGGATCAAGAAGACGACGACGACCGACGATCTCAGTTGTCCAATAAGCAATCGGAATGCGGCGAGAACGAAGGGGACGACCCCGATATGCCGAACGATGAAAAGAACGACGATTGCGAAAGTGTGACGGAGGATAGAAGCAGTGCGATAGGCGGTACCGATTGCGGCGCCACCGAACAAAAAGCGGGCGACGAAGAGGACGACGAGGACGAGGAGGAAGGTGAAAGTGGGTGGAATTATTGA
Protein Sequence
MEQFRLIDSLEIQFKRATLAEKEVNTLKEQLSGSTTTSPLSPTTPSTTNSLSTISPSTTTVTASAILAAVSPTQAVSATATVATVPNKITLNNNNNNNNNINSNNNNTNSKTTVNSFAITQQNGLPSPASSPPSSNCGSTTTTPPTTTPITNNCIGVGLNLLPNSVTIATNLLSSSTTTPPALNKLLHLNNNKMDDGNSMTSLTSMTADIKLEEQLHNNNNNSNSSNNNNNNNNSANSTSNLIRSSTPIENKSNTSADCPSNLSNVNSNSNSCNTSNNNSSSNNKSTSATTLVDELAAKDKEIKALIDEVTRLTALQESHIVQIQRLEERLEVKRQHIQRLESRLRSQSLNLVDDDVKKENSNIIPTLDITSPAVAAAAAAAAASAATDAKQFQELLLEQTKALAAAQNEALKSSSSSDGSATPLQTCKSQTSSLVEQSTTPLTTTAATTMNRSADVSSPINHNINNTTSPPTISNKLSSTTPPKTRTISRSATSTPFGGSTFPVAAPGVGHFANNSTTIGGGECSRDNQNSPHSSNGGGSGGGSSGSNFHNVEQFGSFLGEEIVSNWRRGFELPPLPLAPPSIAVTSAAAAAVAAAIATQATTPIPFQAMPPSTRPSTAPSTTTLLSQLVNSTFSNSLQTDTNSGVVAGNLNNCHQDNMDKASSHHDNSSTASTPNLQDSRSIDEHMNGSCGPGGLTPMSLQMMKNQAEDNNNTLGSLPHVPAGFLPGLPFQFQDRGHFRFAEDLQMPPGSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVLLLKSLIPKKDSGMPQYGRSDDSMSDDRLAHILTEASNLMKTPQGHNPAHLHHHQQQQQHQQATQQFQQAAQQQQQQHQQHQQQLQQQQLQSLHQSSSGQEDSHSNEDSKSPLNDSPSPFYKDALQRRIKKYDNDDIPQDKVARIYQEELAKLMTRGPRDAFQSFLFPHFFSGGMPPAAAAAANQPMPDENIRMALEAYHRELAKLQQTGGAIPNFPNLPGLLALQQQALNGAQDLSCKKAEKVMKLNGQQQNSFSMDSCDQSTKDSTTTVEDALRHSSAFSLVRPKQEPGTPAPNNVNTNASSTAPSPLGNSILPPAMTPNDDFSSAASPLQRMASITNSLITQAPVQPHHSTPQRPMKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGSPQIPTGLSQKMVPMQKMMNEMKMQDAPQHLMQLQASVMAHIPSSQHQGMLLTPPGLPPHHAINLPTHNEKKPMMMPSVHSPQQNNAMRGMHQHMSPTVYEMAALTHDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQAIKIERREASKRRRSTGPGTQDNSSDTSSNDTADFYTSSPGPGSVGSAGVPPNKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELALATRTITNWFHNHRMRLKQQVPHGTPSEPVPSRENQSGTPFDPVQFRILLNQRLMELQKERMGLSGVPIPYPPYFTTNPNLAALIGRGLLPGNEPSLAALNNAFKEQMSGLDLTMNALKRERNDDFDDDGEEESHLSDTESMDGSDNKSELKETPTSSRLSGSTLGQSRTSRRKPAAPQWVNPDWQDGTTGHPPIGGPITEPEVIINGVCVMQNQAADYSRKAGSEETVRVEPTDVQDHHQFIDDDAEDELGSDQEDDDDRRSQLSNKQSECGENEGDDPDMPNDEKNDDCESVTEDRSSAIGGTDCGATEQKAGDEEDDEDEEEGESGWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00203393;
90% Identity
iTF_00203393;
80% Identity
iTF_00203393;