Basic Information

Gene Symbol
kn
Assembly
GCA_951812415.1
Location
OX638311.1:63552135-63568500[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-119 2.8e-115 386.8 0.0 205 385 1 209 1 212 0.99
2 2 7.1e-11 1.2e-06 28.0 12.7 422 509 212 301 209 317 0.80

Sequence Information

Coding Sequence
ATGCGACGATTCCAGGTTGTAATTGCAACACAGGTGACCGTCGAAGGACCCCTATTAGCCATATCCGATAATATGTTTGTACATAATAATTCAAAGCACGGCCGTAGAGCAAAACGTTTGGACGCAACGGAAGGTACAGGCAATTCTCCCTTGGCCATTTCGGGTCATCCCCTTGCGCCTGACAGTACGTACGACGGACTCTATCCACCGCTTCCAGTGGCAACACCCTGCATTAAAGCGATTTCGCCGAGCGAGGGTTGGACAACGGGTGGTGCGACTGTTATTATAGTTGGCGATAATTTCTTCGATGGCCTTCAAGTTGTTTTCGGTACGATGCTAGTTTGGAGCGAGCTGATTACGTCACATGCGATTCGAGTACAAACACCACCTCGACATATTCCCGGAGTTGTTGAAGTTACGCTATCCTATAAAAGTAAGCAGTTCTGCAAAGGATCGCCAGGACGATTTGTGTATGTTTCATTAAATGAACCTACGATAGACTACGGCTTTCAAAGGTTACAGAAGCTGATACCAAGACATCCTGGAGATCCTGAAAAACTGCAGAAAGAGATAATTTTAAAACGTGCTGCTGATTTGGTAGAAGCTTTGTATTCAATGCCAAGGTCGCCGGGCGGATCAACCGGATTCAATTCATATGCCGGTCAATTGGCCGTTACAGTGCAAGACGGAAGCGGTCAGTGGACCGAAGATGAATACCAAAGAGCACAGAGCAGTAGCGTTAGTCCGAGAGGGGGCTATTGTAGCAGTGCATCGACTCCACATTCGTCGGGCGGTTCGTATGGTACGACAGGAAATGGATATGGCCCAGCACCAAATATGGGAACCCTTTCGTCATCACCAGGCAGTGTGTTCAATTCGACATCCACTAGTGCTTTCTCACCACTAATAGCAACATCAGCTCAATGGCATCAAGTTTTTATTCCACAACACCATCACCATCACAATTATCATCAATCCTGGCATAATCCTCAAGAATCTACCGCAACAGCTGTTTAG
Protein Sequence
MRRFQVVIATQVTVEGPLLAISDNMFVHNNSKHGRRAKRLDATEGTGNSPLAISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVTVQDGSGQWTEDEYQRAQSSSVSPRGGYCSSASTPHSSGGSYGTTGNGYGPAPNMGTLSSSPGSVFNSTSTSAFSPLIATSAQWHQVFIPQHHHHHNYHQSWHNPQESTATAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00455729;
90% Identity
iTF_00642950;
80% Identity
iTF_00202301;