Basic Information

Gene Symbol
grh
Assembly
GCA_951812415.1
Location
OX638311.1:128684260-128816987[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.8e-30 1.2e-25 91.1 0.0 24 148 450 569 436 572 0.92
2 2 9.3e-18 1.6e-13 51.4 0.2 169 221 572 623 569 625 0.92

Sequence Information

Coding Sequence
ATGTCTTCGGTTGCAACCTGTTCCGATCAAGTGCAGCACAATCATACAGCAACCGAAGTCATAAATCATGTGACGGCTGGTCAAACAAGTGTCACACAATCTGGATATTTGCCAACCGCTCGTTACTTTGAGCATCCGCTGACCGCCGTCACTTCGGCCATGCTAAACATCTCGTCGGGAAATGGACATTCACAGAACGACGATGACCACGGGAATGGCAATGGTAATGGCGGTAACACGTCCGGAACAACGAGCGTTAATATCGGAACCTTGAGTGCACCGCATCATCAGGTGCACGAAGTACACAATCCGAATGGCAGTACATCCTTTGTGTACGAGTACTACAAAGTGACCGATAACAAGGACGGATTACAATGGAGTGCCCCCACTACGACAAAATTGAATGGACAGACCACACCTCTCGATGTATCTGGCCTATCGCAAAATGAAATACAAGGTCTATTGCTCGGTTCACACCCATCGTCTTCGGCTACAACGACAACATCACAATCGGCGACGGTCGTTGTAACTCAACAACAACAtcaacaacaaaatattaatgTTAAACGTGAACCCGAAGACTTACGAAAGGATCCAAAATGTGACGGCCGAAAGGTATTGGTCGTTCAATCGCCATCACCATCAATACAGATTAAAGAGCCACCACCCAGTCCTGGAAGTCCATCAGCTGAAACAATGTACGCTGCCACCGGCGGCACGCAAATCTACCTTCAGGGTCCGCACCAAACAAGTTCAACAACATCAGGTTCAAATGTAAATACACAGAGTCCAAGCCCTGGACCATATGTGTCGGCAGATCAGTATGGAATGTACACAAGGCTGGCTACTGGACCCGGATCCACCTTCATCTCCGAACCATACTATCGGGAATATTTTGCATCTGATGGCCAAGGGTATGCGCCGACAAGGACTATCTACGGAGACGGTGACGGACCACAGCCTGGCACCACCTACGAAGGACGTTTCGCAACGACACATACGAAAAACGGTACACCGGTCTATGCGAAAACGGTAACCGCTGCGGGCCTTACAGTCGATCTTCCAAGTCCGGATTCGGGGATCGGTGCTGATGCAATTACCCCAAGGGATCAAAATAATATTCAACAGtCATTCGATTATACTGAATTGTGTCAGCCGGGCACATTATTGGATGGTAATGGTGCAATTCCAGTTTCGGTTAATAACATTCAACGGGCAGTTAATGTTCATGCCGGACAAAATAGCCCGACAACGTCGTTGGGTAATGGCAGCAATCCAGCATCAAGATCAAGGCCATGGCATGATTTTGGCCGACAAAATGATGCGGATAAAATTCAAATACCAAAAATATTCACAAACTTAGGCTTTAGATATAACCTGGAAAGTCCAATTAGTTCATCACAACGACGAGAAGATGATCGAATAACTTATATAAATAAAGGACAATTCTATGGTATCACATTAGAATATGTCCCAGATCCGGATAAGCCGTTCAAAAATACAACAGTCAAAaGTGTCATAATGTTAATGTTCCGAGAAGAAAAAAGTCCCGAAGATGAGATCAAAGCCTGGCAATTTTGGCACAGTAGGCAGCACTCTGTCAAACAGAGGATACTAGATGCCGATACGAAAAATTCAGTTGGTTTAGTTGGATGCATCGAAGAATTATCACATAATGCAATTGCAGTTTATTGGAATCCATTAGAAAGTTCAGCGAAGggtTTGCCATTACACGTTCAAATTGACACCTTCGAAGATCCCCGTGATACCCAGGTCTACCATCGAGGCTACTGTCAAATAAAAGTCTTTTGCGACAAAggAGCGGAAAGGAAAACGCGAGATGAGGAACGACGCGCAGCCAAACGGAAAATGACCGCCACTGGTCGAAAAAAGCTGGACGAATTGTATCATCCTGTTGCCGATCGATCAGAATTTTACACGATGCAAGATCTTACCAAACCACCGGTACTTTTTTCACCTGCCGAAGATATCGACAAAAATTTTTATGGTCATGAGACTGATTCGTTATCGGGAACGCCCGATGGCCTTAAAGGTACATCACCATTTCTCCTGCATGGAACACAGAAACCAACAACGCCGACACTCAAATTCCACAATCATTTTCCGCCCGACGTGCAGACtGATAAAAAAGATCATATCCTCGATCAGGCTCTTGTACCCGGTTCTATGGCCGAATTCGGACCCCCAATTAAACGATCGCGAATGACGCCGCCACTGAACGAACGCGTAATGTTATACGTGCGGCAAGAAAGCGACGATGTTTACACGCCACTGCATGTTGTCCCCCCAACTACAATTGGACTTTTAAATgcgattgaaaataaatacaaaatctcCACAACCAGTATAAATAACATTTATcgaacaaataaaaaaggGATTACGGCGAAAATTGACGATGATATGCTATCATATTACTGCAACGAAGACATATTTCTCCTTGAGGTTCAACAAATTGAAGACGATCTATTTGATATAACACTAACCGAGCTTCCGAATCATTGA
Protein Sequence
MSSVATCSDQVQHNHTATEVINHVTAGQTSVTQSGYLPTARYFEHPLTAVTSAMLNISSGNGHSQNDDDHGNGNGNGGNTSGTTSVNIGTLSAPHHQVHEVHNPNGSTSFVYEYYKVTDNKDGLQWSAPTTTKLNGQTTPLDVSGLSQNEIQGLLLGSHPSSSATTTTSQSATVVVTQQQHQQQNINVKREPEDLRKDPKCDGRKVLVVQSPSPSIQIKEPPPSPGSPSAETMYAATGGTQIYLQGPHQTSSTTSGSNVNTQSPSPGPYVSADQYGMYTRLATGPGSTFISEPYYREYFASDGQGYAPTRTIYGDGDGPQPGTTYEGRFATTHTKNGTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNIQQSFDYTELCQPGTLLDGNGAIPVSVNNIQRAVNVHAGQNSPTTSLGNGSNPASRSRPWHDFGRQNDADKIQIPKIFTNLGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVPDPDKPFKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEELSHNAIAVYWNPLESSAKGLPLHVQIDTFEDPRDTQVYHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVADRSEFYTMQDLTKPPVLFSPAEDIDKNFYGHETDSLSGTPDGLKGTSPFLLHGTQKPTTPTLKFHNHFPPDVQTDKKDHILDQALVPGSMAEFGPPIKRSRMTPPLNERVMLYVRQESDDVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMLSYYCNEDIFLLEVQQIEDDLFDITLTELPNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00118458;
90% Identity
iTF_00202279;
80% Identity
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