Bcha000136.1
Basic Information
- Insect
- Beris chalybata
- Gene Symbol
- pnr
- Assembly
- GCA_949128065.1
- Location
- OX421894.1:218479-219913[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-18 2.4e-14 53.9 3.2 1 34 114 146 114 148 0.97 2 2 4.1e-19 3.6e-15 56.5 6.2 1 35 168 201 168 202 0.98
Sequence Information
- Coding Sequence
- ATGTTTCATTCAAGTTCGGCATATCCAGATATAACAGGCAGTGCAGGTAATGCTGTAGCTTACCATCAACAAGCAGCAGCTGCTGTTGCGAGCACACCAGTATACGTTCCTTCGAACCGAGCTCTACCACATACCCAGTACGGGCATACAGGACCGTTTGGCAGTGCAACACAGAATGCTTGGACCACAGACAGTTTTGGAGCTACACACTCGCAGCTGCCCGCACAGTTTTACGCGCAATCCATGATGGGTTCGTGGAGAACTTACGACCCAAGTGCATTTCAAAGGACATCGCCTTACGACAGTGCTATGGAGTTTCAATTTGGCGAAGGGCGCGAGTGCGTTAATTGCGGAGCGATTAGTACTCCACTCTGGAGACGAGATGGGACTGGCCACTATTTATGTAATGCATGTGGACTGTACCATAAAATGAATGGAATGAATCGGCCACTTATCAAACCCAGCAAGCGATTGacggCAACACGTCGATTGGGTCTTTGTTGCACAAACTGTGGTACAAGGACAACTACACTTTGGCGACGCAATAATGAAGGCGAGCCAGTATGCAATGCTTGTGGACTTTACTTCAAACTGCACGGTGTAAACCGACCATTGGCGATGCGCAAAGATGGAATCCAAACGAGAAAACGCAAACCCAAAAAATCAGGAAATGATACTTCTTCGGGCAAAGAGAAGGATTCTAATGACCTAAAACCGTCCTTATCATCGGTGTCATCCAGTAGTCATCATACGCTAGAAAGGACTGTATCCTCAACCAAACTCACTACATCGTCCAGTAGTCCTAAGCACTCCACCCACCATCACCATATCCAGTCATCTACTACACCTATTTCACAAACACGAACACAAACCTCTTCAAACAATACCTCTTATTCATCACACATCCTCAGTCAGACAGCTATGGCAGGTACTTCTTCAACGAATATCCATGGAAACAGTTTGTCCCTGGCGAGTCCCTCGTCAGCAAAATACGAACACCTCCTCCACGCTGGCGTATCGACTGCTTCGAATTTATCGTTAACTAGCGGCGTTGGCAGCGTATCCAGTGGAAGTACCAACTATCATTCCCACCATAATTTGGGACAACATGGGTATGGAAGTATGAAAGCGGAGACAAACGCCTCGAACTACGAATACGTAAACAATTGCTACTTTGGCGGAACATTCGGCGCCCTGTCAACATCTAGTGGCGGCGTGCATGGAACACCTGAAGTAGCAGGATATCATCATCAGCACAATGTGATCCACGCAGCCAAACTGATGGCATCATCGTAA
- Protein Sequence
- MFHSSSAYPDITGSAGNAVAYHQQAAAAVASTPVYVPSNRALPHTQYGHTGPFGSATQNAWTTDSFGATHSQLPAQFYAQSMMGSWRTYDPSAFQRTSPYDSAMEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKSGNDTSSGKEKDSNDLKPSLSSVSSSSHHTLERTVSSTKLTTSSSSPKHSTHHHHIQSSTTPISQTRTQTSSNNTSYSSHILSQTAMAGTSSTNIHGNSLSLASPSSAKYEHLLHAGVSTASNLSLTSGVGSVSSGSTNYHSHHNLGQHGYGSMKAETNASNYEYVNNCYFGGTFGALSTSSGGVHGTPEVAGYHHQHNVIHAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00325039;
- 90% Identity
- iTF_00204050;
- 80% Identity
- -