Basic Information

Insect: Beris chalybata
Gene Symbol: Zbtb41_5
Assembly: GCA_949128065.1
Location: OX421894.1:25561697-25563301[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.5 67 5.5 0.1 2 20 253 271 252 273 0.86

2 9 1.5e-06 0.0002 22.8 0.2 1 23 289 311 289 311 0.98

3 9 9.4e-05 0.013 17.2 2.8 1 23 317 340 317 340 0.97

4 9 3.2e-06 0.00042 21.8 0.8 2 23 345 366 344 366 0.97

5 9 4e-05 0.0053 18.4 0.2 1 23 372 395 372 395 0.98

6 9 0.0022 0.3 12.9 2.4 1 23 406 428 406 428 0.99

7 9 1.4e-06 0.00018 23.0 2.3 1 23 434 457 434 457 0.98

8 9 1.3e-05 0.0017 19.9 1.0 1 23 467 489 467 489 0.97

9 9 1.1 1.5e+02 4.4 1.5 1 23 495 518 495 518 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.5	67	5.5	0.1	2	20	253	271	252	273	0.86
2	9	1.5e-06	0.0002	22.8	0.2	1	23	289	311	289	311	0.98
3	9	9.4e-05	0.013	17.2	2.8	1	23	317	340	317	340	0.97
4	9	3.2e-06	0.00042	21.8	0.8	2	23	345	366	344	366	0.97
5	9	4e-05	0.0053	18.4	0.2	1	23	372	395	372	395	0.98
6	9	0.0022	0.3	12.9	2.4	1	23	406	428	406	428	0.99
7	9	1.4e-06	0.00018	23.0	2.3	1	23	434	457	434	457	0.98
8	9	1.3e-05	0.0017	19.9	1.0	1	23	467	489	467	489	0.97
9	9	1.1	1.5e+02	4.4	1.5	1	23	495	518	495	518	0.89

Sequence Information

Coding Sequence: ATGGACGATAGAAAAAGAGTGAAAGAGTTGATGACGTTGCCCAACGAATATGAACGCCGCACTGAATCGGATATGAAAATAATCAAAACGGAAAATATCGAAGATTATCACACATCAAATGATTATCAATTCGAACAAACGAGTTTACCCGAAAGTTTTCAACATGATGTTACGTGCCAAGCAATGCCGATTGCACAAACGACAAATGGTGATAGATTCGAGGTAACGAGTTTGTCGGCGGAAAGTTTCGAGCATAATGTTGCGCACCAAGCGCTACCAATCGTACAAACatcaaataattataaattcgAGCAATCGAGCTTACCGCAAATGAGTTTATCGCAACCGAGTTTACCAGAACGGTTTCAGCATGATGTTACCCGTCAAGCAATATCGAGCACATCAAATGATTATAAATTTGAGCAAATGCATTTACCGCAAACAAGTTTATCGCAAACTAGTTTATCGCAAACTAGTTTACCGCAAACGAGTTTATCGCAAACGAGTTTACCGCAAACAAGTTTGCCAGAAAGTTATCAGCATGGTATTACGCATCAAGCGCTACCGCCCGTACAAACATCAGATGTTTATAAATTCGAGGAACTGAGTTTTGAGCATGATGTTACCCCTGATGTTACGCATGAAGGGACATCGATCTTACAAGAAATAAAGCAAGAAGAAGAAATCGATTTAAATATGGATGAAGAAGATTTTAACGAAACGGATCCAGACGTGGTATGTTTGGACAACGTTTTACAATGTAAACTTTGTACAGAAGTCTTCGACGatgaagaaattttaaaaatgcatACTGAAGAATGTTCAAAGACTTTCCGATTTGAACGtaaatcgaaaattttaaactttaaatgTCCGATATGTTCGAAAGCATTCGGAGATAAACATAATCTGGCTGCACACGTCTCGATTCACACAGGAGAGAAACCATTTCACTGCGAATTATGTTCGAAAAATTTCCGACTAAATGTATATTTGACAAACCATATGCGATCGGTACACGGTGCCGAGTTAAAATGTGCAATAtgttacaaaatatttgtacataaaGAATATTTGAATGCGCATATGAGAATTCATACTGGTGAAATGCCATTTGAGTGTAAAAAGTGCCCGGAGAAATTTCCATTGAACACCTACTTGATAGCACATATGGAAACGGTACATGCCAAAGGACGAAGAAATATTATTCGAAAGTTTAAATGTGCGATATGTATGAAATTATTCGGATATAAACAGCATTTGTTTGAACATATGCGAGTTCATTCAGAAGAAAAACCGTTCAAGTGTGACGAATGTCAGAAAACGTTTCGATTCAAGTCAGGTTTACGGTCCCATACGCAAACAGCACATGGCGACGGTAAGCCCAATAAGAGAAAGTATAAGTGTCCAACGTGTTCGAAATTATATacaaataatcaaaatttaaaagcaCACATTACACTACACACGGGAGAGAAACCTTTTAAGTGCGAATTGTGCCCAAATAGATTTCGAATTATAGACTATATGATTTGTCATATGCAAAGAGTGCATGGTGTTAAATCGCAATGTGGAGAAGATTCCACAGTTTATATAGTAAATTGA
Protein Sequence: MDDRKRVKELMTLPNEYERRTESDMKIIKTENIEDYHTSNDYQFEQTSLPESFQHDVTCQAMPIAQTTNGDRFEVTSLSAESFEHNVAHQALPIVQTSNNYKFEQSSLPQMSLSQPSLPERFQHDVTRQAISSTSNDYKFEQMHLPQTSLSQTSLSQTSLPQTSLSQTSLPQTSLPESYQHGITHQALPPVQTSDVYKFEELSFEHDVTPDVTHEGTSILQEIKQEEEIDLNMDEEDFNETDPDVVCLDNVLQCKLCTEVFDDEEILKMHTEECSKTFRFERKSKILNFKCPICSKAFGDKHNLAAHVSIHTGEKPFHCELCSKNFRLNVYLTNHMRSVHGAELKCAICYKIFVHKEYLNAHMRIHTGEMPFECKKCPEKFPLNTYLIAHMETVHAKGRRNIIRKFKCAICMKLFGYKQHLFEHMRVHSEEKPFKCDECQKTFRFKSGLRSHTQTAHGDGKPNKRKYKCPTCSKLYTNNQNLKAHITLHTGEKPFKCELCPNRFRIIDYMICHMQRVHGVKSQCGEDSTVYIVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00203837;
90% Identity: -
80% Identity: -