Basic Information

Insect: Beris chalybata
Gene Symbol: -
Assembly: GCA_949128065.1
Location: OX421894.1:124950024-124953893[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.11 15 7.5 0.9 1 23 709 732 709 732 0.87

2 12 0.00033 0.044 15.5 2.4 2 23 864 885 864 885 0.97

3 12 8.7e-06 0.0012 20.4 0.2 1 23 891 913 891 913 0.97

4 12 0.00018 0.024 16.3 7.3 2 23 920 942 919 942 0.96

5 12 2.4 3.2e+02 3.3 0.1 5 23 953 971 951 971 0.96

6 12 0.0017 0.23 13.2 2.6 2 23 977 999 976 999 0.96

7 12 0.0017 0.22 13.2 0.8 2 23 1010 1030 1009 1030 0.97

8 12 4.4e-05 0.0059 18.2 0.8 1 19 1036 1054 1036 1058 0.95

9 12 7.6e-05 0.01 17.5 1.4 1 23 1066 1088 1066 1088 0.99

10 12 9.5e-05 0.013 17.2 5.4 1 23 1094 1116 1094 1116 0.97

11 12 6.1e-05 0.0081 17.8 3.8 1 23 1122 1144 1122 1144 0.99

12 12 0.0098 1.3 10.8 5.6 1 23 1150 1172 1150 1173 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.11	15	7.5	0.9	1	23	709	732	709	732	0.87
2	12	0.00033	0.044	15.5	2.4	2	23	864	885	864	885	0.97
3	12	8.7e-06	0.0012	20.4	0.2	1	23	891	913	891	913	0.97
4	12	0.00018	0.024	16.3	7.3	2	23	920	942	919	942	0.96
5	12	2.4	3.2e+02	3.3	0.1	5	23	953	971	951	971	0.96
6	12	0.0017	0.23	13.2	2.6	2	23	977	999	976	999	0.96
7	12	0.0017	0.22	13.2	0.8	2	23	1010	1030	1009	1030	0.97
8	12	4.4e-05	0.0059	18.2	0.8	1	19	1036	1054	1036	1058	0.95
9	12	7.6e-05	0.01	17.5	1.4	1	23	1066	1088	1066	1088	0.99
10	12	9.5e-05	0.013	17.2	5.4	1	23	1094	1116	1094	1116	0.97
11	12	6.1e-05	0.0081	17.8	3.8	1	23	1122	1144	1122	1144	0.99
12	12	0.0098	1.3	10.8	5.6	1	23	1150	1172	1150	1173	0.93

Sequence Information

Coding Sequence: ATGGCGGGACTAGGGAAACAGCTTCCTCCGCCGCCAGCATATGGAACCGCAATAAATCAGCTTCGATCTCAACAGCATCATATAGGTGGTTTCCAAAGTCAATCGTTGCCACCACCATTAACCTCTCCGTGTAGACCATCATCAAATTCAACCGCACTAGATTTTGCTATGCCGAGGAATTTAACGCCGCGACCATCGCCGTCACCATCCGTTCTCCGATACGCCGAAAGTCCTGTATCAGCCCATTATGTCGAGCGTGAAAACGGTGACTTTATTGTACAGGAGCAGCCGCGACATGTTGTCGAATGCGTGGAAAAGGAAAATGGTGATTTTTCGGTTATTGAAAAAGTGATACAATCGGCACCAAGTGTTGTTCAATTTAACGAAAGTGATAACGACGAGAGTATACAAACCGGATTCCAGGATAGCAATACAGAAACGGCTGAAAATCAATTATCCGACGAAGATAGCTTACAGTCCGCAACAGAATTGACCAATATAGCAGGCGTTACAGTTTTAAGTAATGTAAAACTAGATGTTAACGAATCATTAGAGCTAATGGAAAACCTAGGAAATATCAACTCATCACACGCCGATATCATATGGTCAGGATTGACCGAGATAAAGAAAGAAACGGTCATCAAGAATGAGGAAATTGCAGAGAAAATCGAGAATGTTTCTAAAGAAACCGATCAGGCATGTTCATCTGCTACGAGTGTTATACGTTTAGCTAGCAATAAGCCAGCCGCTAGTCATAAAGAAAGTGGAAGGCGTTCGAAGCAACAAGAGGCGAGTACGCGTTATCAAACGGCTGTTAAACGGCCATACCGGAAACAGCCAAAAAAGTTGACGGTTAAATTTAAAGTGGCAGTACCATCATCAGCTGAGGTCGAAACCGATGCTGATGATGTACTAAACGATTCAGGTAGTAGTTCAATCATAGCTCAGGTTCAACCTAACGTAGATTTAGTCATAACAGATGAAGAACTACCAAATTCAGAGGATATGCAATTATCAGGCAATACAAGCGCTCAATTGTTACAGGGGCCCGAAGAAAGTCCTGCATCCAATGCCAAAAATTCCGATAGCAATTCAATTTTAGACGAACAAAAAATAGAAGAAGAAACTGAAGAGACTGAAGTTAATCCGGTTAAACTAGAAGTAGCACATCCCATGATTGTACACGAGCCGTCGTTAAGCCAAGAGCCAAACTTTGAACTATCCATGGAATATTCGGCGCAGAAATTAGTACAATCATCGTTATCATCATTATCATTGTCATCATCACCTGTACCCTTGCAATACGAACAAACGACTGAACAAAGACAATTAGAACTATCAACACTCCTCGAAGAATGCGTACATAACGAGAAAATCCAATCATATCCGCTATCTTCTACGTCAACCATTGCAAATAGTACTTCCTCCGATGCCGATAAAACCTCATCAGTGAACTATACCGACGAAATTGTCAATTCCGAATCACCGAAATACGAAAATATCGTTGCCGATACGGCAACATTCAATTCATTTCCGTCAACGTTGAATTCATTTTCCAAGCCGTCGACAAGTTCCTTTGCTTTACacgaacaacaacaacagcagcagcaacaaccgACTGAATACAGCGGTGAATATCCGTTTGGATTACTCTACGGTTGTGCTAATGCAGCCGAAGATCAACCATGGAGCCGATACATTATGCAACAGCAAATGCCCCAATTCCAGGAACTGGATTCCGAACGGAGCAGCTACATTGATTTGGACACGTACAAGATAACAAGTTGTGACGTTACGTCGGTTCCAAACGCTTTAAATATTCGAACCGATGAAAAAATGCCGGCTAAAGGTGAAATTTCCGAGCAGGAGAGTAACGGCGATGTGGAGAATTCGTGGAGCAATCCGCATTCTGGTTTTCGAATTATTAATTCATACGAAGCATACACGAAGGAGTTGAGTGAAAGTTGGACCCCGAGTAACGATGAGGCTGTGCCGTATTCTCACGCGTTTGCTTCAGGACTGAAAGTGAATACACCGCAGGATGTGGCCAATCTTGAGGAGAAAATGACAATCACTGCACCgtatataaaaattgaaaagaacgTTCCTCGAAGGCCCAAACAGTTTCCTTGCACGCACTGCGACAAACGGTACCCGCTGCTGAAAGAACGAAGCGCGCATCTCATCGAAAAGCACGGCTACAAACGTTTGAATCGTCGACTCGTACGCGACGTCCCACCATCGACAATAACCACCGAAAATAGGACCGCTGAAACCGACGGCACGATTACAACAGCCGAAAACAATGTAACTTCTGAACTAGCCGAGGACATAAAGCCCGAAGTCAAATCGGAAATAACACTGGCGAGTACAATCGATACAACTGTGTTTCGGCGCACTAAATACGATTCGATTCGCGCCGGTGTCTATCGTATGCTGATGAACTTCAATTTGAACGTGCTGCAAGAAACTAAAAATATCGAAGTCGACAAAGCGTATTTCGAATCGAAATCGTTCTGTTGCTTTTCGTGCAAGCTCGACTTTATCAGCGTGAAATTATTCGACGAACATCTAGCCGAACATCCGGCCGAATGTTTTACGTGCGGCCGAAAATTCACACGTTGGACTTATTTCTCGTTGCACTTGAAACGGCATTTAGGTTGGAAAGATTTTGCATGTTCGGTATGTGATAAGAAGTTCGTGATACGCAGTGCGTTAATCGAACATATGCGAATGCATACCGGTATAGCGCCGCTCAAATGCAATTTATGCGATAAGCAATTTAAACGATACTCAAATTTGACGCATCATAAAAAGGTGTGTCATAGTACACAAAAAAAGAAGGACTACGTATGTTATTGCGGCGAAGTATTGCCGTCGAAAGCTCGCTTCATTTGGCACAAGGAAACGCACGAAACAAAACCGAAAGTCTGTCCGTACTGTCGCGATCGTTTCGTACATCGGAACAGCCTGAAACGACACATTCGCCTTACACATTCGGACAAATTCAATTATGTTCAGCCGGTTAAATGTAAAGTTTGCAAGCAAGTCTATACGAAATCGAGTATGAAAGCGCACATGGTAACGCATTCGATCGATACACAGCATGAATGTGCGATCTGCAATAAGTCGTTTACGACCAAATGGAATCTAAAAATTCACAGTTGGGTGCATGCAAATCGAACGGCAAAACCGTACAAATGCGAACATTGCGTTAAGGCTTTTGTACGCGAAATCGACTATAAAAATCACATAAATTCCCATAAGCACATAAAACCCTTTACATGCGAATATTGCGGCTGTAAGTTTATACGAAAATACAATTATATGCGACATCGTCAGGAACATGGCGGACTAAAACGTTTCAAATGCGACCTTTGCGGTAAATTGTTTCATCGAAACTACTATCTGATTGAGCATCGGCGCACACATACCGGCGAACGTCCGTTCTTATGTACGATATGTGGTAAAAGTTCAACAACAAAAACCAATCataataaacatttaaaaatacatCATTCGCGTGATCCGTTTACGTCTGAGTCGTAG
Protein Sequence: MAGLGKQLPPPPAYGTAINQLRSQQHHIGGFQSQSLPPPLTSPCRPSSNSTALDFAMPRNLTPRPSPSPSVLRYAESPVSAHYVERENGDFIVQEQPRHVVECVEKENGDFSVIEKVIQSAPSVVQFNESDNDESIQTGFQDSNTETAENQLSDEDSLQSATELTNIAGVTVLSNVKLDVNESLELMENLGNINSSHADIIWSGLTEIKKETVIKNEEIAEKIENVSKETDQACSSATSVIRLASNKPAASHKESGRRSKQQEASTRYQTAVKRPYRKQPKKLTVKFKVAVPSSAEVETDADDVLNDSGSSSIIAQVQPNVDLVITDEELPNSEDMQLSGNTSAQLLQGPEESPASNAKNSDSNSILDEQKIEEETEETEVNPVKLEVAHPMIVHEPSLSQEPNFELSMEYSAQKLVQSSLSSLSLSSSPVPLQYEQTTEQRQLELSTLLEECVHNEKIQSYPLSSTSTIANSTSSDADKTSSVNYTDEIVNSESPKYENIVADTATFNSFPSTLNSFSKPSTSSFALHEQQQQQQQQPTEYSGEYPFGLLYGCANAAEDQPWSRYIMQQQMPQFQELDSERSSYIDLDTYKITSCDVTSVPNALNIRTDEKMPAKGEISEQESNGDVENSWSNPHSGFRIINSYEAYTKELSESWTPSNDEAVPYSHAFASGLKVNTPQDVANLEEKMTITAPYIKIEKNVPRRPKQFPCTHCDKRYPLLKERSAHLIEKHGYKRLNRRLVRDVPPSTITTENRTAETDGTITTAENNVTSELAEDIKPEVKSEITLASTIDTTVFRRTKYDSIRAGVYRMLMNFNLNVLQETKNIEVDKAYFESKSFCCFSCKLDFISVKLFDEHLAEHPAECFTCGRKFTRWTYFSLHLKRHLGWKDFACSVCDKKFVIRSALIEHMRMHTGIAPLKCNLCDKQFKRYSNLTHHKKVCHSTQKKKDYVCYCGEVLPSKARFIWHKETHETKPKVCPYCRDRFVHRNSLKRHIRLTHSDKFNYVQPVKCKVCKQVYTKSSMKAHMVTHSIDTQHECAICNKSFTTKWNLKIHSWVHANRTAKPYKCEHCVKAFVREIDYKNHINSHKHIKPFTCEYCGCKFIRKYNYMRHRQEHGGLKRFKCDLCGKLFHRNYYLIEHRRTHTGERPFLCTICGKSSTTKTNHNKHLKIHHSRDPFTSES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00203842;
90% Identity: iTF_00203842;
80% Identity: -