Basic Information

Insect: Beris chalybata
Gene Symbol: zfh1
Assembly: GCA_949128065.1
Location: OX421894.1:26024153-26029480[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.02 2.7 9.9 0.3 3 23 206 227 205 227 0.95

2 12 0.0022 0.29 12.9 1.7 1 23 239 262 239 262 0.97

3 12 0.033 4.4 9.2 1.0 5 23 271 289 269 289 0.96

4 12 9.1e-05 0.012 17.2 5.0 1 23 295 317 295 317 0.99

5 12 0.00072 0.097 14.4 1.0 1 23 323 345 323 345 0.91

6 12 7.5e-07 0.0001 23.8 3.6 1 23 365 387 365 387 0.99

7 12 0.01 1.4 10.8 1.4 1 23 393 416 393 416 0.95

8 12 0.15 20 7.1 0.1 2 23 434 455 433 455 0.96

9 12 6.1e-07 8.2e-05 24.1 0.5 1 23 461 484 461 484 0.97

10 12 8e-06 0.0011 20.6 1.1 1 23 490 512 490 512 0.97

11 12 0.051 6.8 8.6 4.6 1 23 518 540 518 540 0.99

12 12 7.6e-05 0.01 17.5 0.5 1 23 546 568 546 568 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.02	2.7	9.9	0.3	3	23	206	227	205	227	0.95
2	12	0.0022	0.29	12.9	1.7	1	23	239	262	239	262	0.97
3	12	0.033	4.4	9.2	1.0	5	23	271	289	269	289	0.96
4	12	9.1e-05	0.012	17.2	5.0	1	23	295	317	295	317	0.99
5	12	0.00072	0.097	14.4	1.0	1	23	323	345	323	345	0.91
6	12	7.5e-07	0.0001	23.8	3.6	1	23	365	387	365	387	0.99
7	12	0.01	1.4	10.8	1.4	1	23	393	416	393	416	0.95
8	12	0.15	20	7.1	0.1	2	23	434	455	433	455	0.96
9	12	6.1e-07	8.2e-05	24.1	0.5	1	23	461	484	461	484	0.97
10	12	8e-06	0.0011	20.6	1.1	1	23	490	512	490	512	0.97
11	12	0.051	6.8	8.6	4.6	1	23	518	540	518	540	0.99
12	12	7.6e-05	0.01	17.5	0.5	1	23	546	568	546	568	0.93

Sequence Information

Coding Sequence: ATGGATGAGCCTGCGGTAATCATTTTGGAGAAAACATGCCGTACCTGTATGACGCAGGAAACCAATGATGAGTTTGTACCTCTGTTCCAAGGTGCAGTGTCCTGTAGATGTGCTCATCCTGAGATCTTCGAAGAGCTGTTGTTCTTCAATTTACAGTTATTGGAGGATGATGGACTTCCGCAACATATTTGTATTAGCTGCTTCGACACATTTACACAGATATGTGAATTTCGAAAACAGTGCCAAGCAGTTCAGGAGAATCTTTCGGTGTATAGACCAATCAAAAATGATACCCTTGAAATTGATAGTATTGATTTTTTAGGTACCCACTCTGAATCTTTCTCCAGCGTGAAAGTTTCGAATGAAGATCGGATTGACGAAAGTCTACTTGCAGAGTACATCGAAGAAGACTACTCAATGGACTACGAAGAAAATCAGCAGGTTAAAAACGAGGGCGTTAGGGTAGTGTTCGAAATAACAGACATAGAGGAGAATAAAATTTCCAAAGTCGATATCAAGTCGAATTTTTTGTGTAGGTTTTGTAAAAAAGAACATCTCGGACAAAACGATCTTACAAAACACATTAAACAATGTCCGAGTCGAAACGTCGAAATTTGCGATTATTGTACAAATGAATTTGAATCCAAAGAGAAGCTTGACGCTCACTTGAAGGAAACACACTTAGACGGCGGCAAACCTAACCGTCCAGTTAGATTTCAATGTTTTAATTGCTATCGTTTTTTTCCAACTGCAACTAAACTTAAAATCCATGAACAACGCGTTCATACAATAATCGAAAACGAATCttcgatttgcaaaaaaaagtttaccaACATTTTCCGTTACAAAAATCATATGGAATCGCACAATCCGGAAAAGAAGTTTCAGTGTCAATATTGCGATAAATTCTTTAGGCAGATTTATAATAAGAAAAGACACGAAAAAACACATACCGGTGGACGTTCGTACTTGTGTAATATTTGCGGAAAAAGTTTTCAATATGAGCAACTGTTCAAGAAGCATAGTGCATTGCATGATAAAGTACCAAACGATAATATCGCTCGGCCGGAAACTGCGATACTTATTGGTCCCTACCAATGTTATATATGCGGCCAATGTTTCAATAAAAAGGGCTCACTGAATACTCATATGCAAACACATGAACTCTTTCGACCGTTTCAATGTGATAAATGCGAAAAAACATGGCGATCGAAAAATGCATTGCAAATGCATAAATACAAGGCACATCGTAGTGATTCAAGTACCAATGAGAATAATTCGACGGGAGATTATCCTTTGCGTTGTTCGTTTTGTTCGAAAGGTTTTTTGGTTGCCTACGCACTGGCCGAACATGTAAAAATCCATAGCGAAGATCGGAAATATGTTTGCGAAAATTGCGGCTATGCTTTTAAGCGAGAAGATCATTTAAATGCTCACATAAGTCGTGTTCATAAGAATTTGCGACAATTCGCATGTGAACATTGTGAAAAATCATTTGTAAATAGAGGCGAATTAAATTCACATAGAGTAACACACAACGaTGAAAAACCGTTCAAATGTACTTTCTGTCCTAACGCATTCAAATGGAAATGTACGCTACGTACACACGAACGTACGCACACGGGAGAAAAACCATTTCCTTGTGAAGTTTGTGGAAAACGATTTTCAACAAGTCAGAATCTAATCTtTCATTCAATAACACATTCAAAAAATCGGAAGAAAATAGTTGACGATTGTAATGTAACGAGTTTGGAAAACGTCCAGACAAATTGCGAAGAAATCGACGATAACTTTGATGTAGAATTTTCTTGA
Protein Sequence: MDEPAVIILEKTCRTCMTQETNDEFVPLFQGAVSCRCAHPEIFEELLFFNLQLLEDDGLPQHICISCFDTFTQICEFRKQCQAVQENLSVYRPIKNDTLEIDSIDFLGTHSESFSSVKVSNEDRIDESLLAEYIEEDYSMDYEENQQVKNEGVRVVFEITDIEENKISKVDIKSNFLCRFCKKEHLGQNDLTKHIKQCPSRNVEICDYCTNEFESKEKLDAHLKETHLDGGKPNRPVRFQCFNCYRFFPTATKLKIHEQRVHTIIENESSICKKKFTNIFRYKNHMESHNPEKKFQCQYCDKFFRQIYNKKRHEKTHTGGRSYLCNICGKSFQYEQLFKKHSALHDKVPNDNIARPETAILIGPYQCYICGQCFNKKGSLNTHMQTHELFRPFQCDKCEKTWRSKNALQMHKYKAHRSDSSTNENNSTGDYPLRCSFCSKGFLVAYALAEHVKIHSEDRKYVCENCGYAFKREDHLNAHISRVHKNLRQFACEHCEKSFVNRGELNSHRVTHNDEKPFKCTFCPNAFKWKCTLRTHERTHTGEKPFPCEVCGKRFSTSQNLIFHSITHSKNRKKIVDDCNVTSLENVQTNCEEIDDNFDVEFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -