Basic Information

Insect: Beris chalybata
Gene Symbol: ZFX
Assembly: GCA_949128065.1
Location: OX421896.1:6507786-6509729[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.4e-05 0.011 17.3 0.3 2 23 268 290 267 290 0.96

2 11 6.2e-06 0.00083 20.9 0.6 2 23 301 322 300 322 0.97

3 11 0.00024 0.032 15.9 2.4 1 23 328 351 328 351 0.94

4 11 3.1e-06 0.00041 21.9 2.8 1 23 359 381 359 381 0.98

5 11 0.00059 0.078 14.7 1.3 1 23 387 410 387 410 0.93

6 11 0.00086 0.12 14.2 0.9 1 23 418 440 418 440 0.99

7 11 0.00036 0.048 15.4 0.3 1 21 446 466 446 467 0.95

8 11 0.00015 0.019 16.6 0.8 1 23 472 494 472 494 0.98

9 11 4.8e-07 6.5e-05 24.4 2.2 1 23 500 523 500 523 0.95

10 11 1.4e-06 0.00018 23.0 1.7 2 23 532 553 531 553 0.97

11 11 0.039 5.2 9.0 3.5 1 23 559 582 559 582 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.4e-05	0.011	17.3	0.3	2	23	268	290	267	290	0.96
2	11	6.2e-06	0.00083	20.9	0.6	2	23	301	322	300	322	0.97
3	11	0.00024	0.032	15.9	2.4	1	23	328	351	328	351	0.94
4	11	3.1e-06	0.00041	21.9	2.8	1	23	359	381	359	381	0.98
5	11	0.00059	0.078	14.7	1.3	1	23	387	410	387	410	0.93
6	11	0.00086	0.12	14.2	0.9	1	23	418	440	418	440	0.99
7	11	0.00036	0.048	15.4	0.3	1	21	446	466	446	467	0.95
8	11	0.00015	0.019	16.6	0.8	1	23	472	494	472	494	0.98
9	11	4.8e-07	6.5e-05	24.4	2.2	1	23	500	523	500	523	0.95
10	11	1.4e-06	0.00018	23.0	1.7	2	23	532	553	531	553	0.97
11	11	0.039	5.2	9.0	3.5	1	23	559	582	559	582	0.96

Sequence Information

Coding Sequence: atgaattcccAGGACACATTTGTTAAACTAGAAAATCGTCCTATAAAATGCGAATACGGGAGTGATGACAATTTCGAATCGCCGCAACAGACATATCCAATGGTCTCATCAATTCCAAAAGAAATTCTTAGCAGTAATGATGTCCAGAATCAAGTCAAACCGGAAAAGGAGATTAAAACCCTACCCCAAGAGGGAGTTGATGCCATCAGTGATAGTTCAATATATCCAGCGGAGTTGGTTAAGAAGGAAAAAACTGAATACGATGGAACAGTGATTGAATATGTAGGAAACGCAGTGAATTCTGGTCAGGAGCAGTTTGAAATAGTCACACAATTCGACGATGAAAAGGTATCTCAATATACAGTAGTGTTGAGCAGTGAATATCCGAAACAAGATCAAGATGAAACTATTTTGCCGAGTGTCAGTGTGGCGAgcgcttttaatgtggaaaaccCGATCATACAAAGTATAAAGAAAGAACCCGAACTGGACATTAGTATGGAAGAAAAGTATGACATCTACATGGAAGAAAACGAGTTTGATGATTTCGATGAATTCGACTACGATGACGACAAATCGCAAATCCAAACGTCTGCCACTAGTCTGAAATGTCCGGGTTGTCCATTTGAAAGTTTGGTTCGAGAAGTACTGGCGAAACATCTGGTTGATGAACACATCGATGGAAAAATGTGTAAACTTTGCAATTTAGaatttGAAGACAGCGTAGCTCAACATTGTTCAAAACATTTGCCTGAGGCTCAAACTTCGAAGCGTGGCGCTGCCGGAAATTCCGAAATACTTGAATGTACGATATGTTCGATAATGTTCCCGTTTCGATCCGAATATATCCGACATATTAAAACAACGCATTCTTACGAGTCCTGGGATAAGAATGAACTTCAGTGCGAGGTATGTTTGGAATCGTTCGAAACAAAGTATCAGTTAGCGCGACACTATCGAACGCATCCCGATTTAAAACCGTTCAATTGTAATATGTGTTcgaaaatttttcgatttcgattcaGTTTGAATAAGCACATTGAATTGAGACATACTGGAGATCGACCCAGACCGTTCGAATGTAAGATCTGTTCGAAAAAGTTCACAACAAAATTTAGTCTAATGGATCACGTCCGGCGTCATACCGGCGAAGTACCATTTAAATGTGAGATCTGTTCGAAAGCTTTTCTACACAACAACGAGCTTAAGACACATATGGTTTTGATGCACGATATAAACGATAAGAAATACTTCAAATGTGAAATATGTTCGAAGATTTTCTGGCGAAAAAATCCATATATGGAGCATATGCGAAGTCATTCGGGTGCCGAACCATTTAAATGTGAGTTATGttcgaaaattttcgaactttCACGAAACCTAGAGAAACATGTGAAAATCTGTCAGCGAACCTACAGCTGTGACATGTGTTCGAAGAAGCTAAcaacgaaattcggtttggatgcCCACATGCGACTTCATACGGGCGAACGACCATTTAAGTGTGAATTTTGCGGCAAAACGTTTCGCTATAAGAacaatttgaaaattcatatggCACAGAATCACGATATAACGGATAAGTGCTGCTTGACATGTACACGATGTCAGAAAGTATTCCGGAATAAAGCCTATTACGAAAGGCATATGCGTGTGCATACGGGCGAACGTCCGTATCGATGTGAAATTTGTAAAATGACCTTTGGTTGTAGAAGTACGATGAAACGGCACACTATGAATATCCATACCGATCCGGATCAACAAGTTCGGGAAAAGCCGACAACAGCCACAACAACGGGTAATATGAAACGTATAAAGGATATAGGAGCCGATGAAGACTCGGTTGAAGAAAAAGTTACGAAAAAGAGAGGAAATTGA
Protein Sequence: MNSQDTFVKLENRPIKCEYGSDDNFESPQQTYPMVSSIPKEILSSNDVQNQVKPEKEIKTLPQEGVDAISDSSIYPAELVKKEKTEYDGTVIEYVGNAVNSGQEQFEIVTQFDDEKVSQYTVVLSSEYPKQDQDETILPSVSVASAFNVENPIIQSIKKEPELDISMEEKYDIYMEENEFDDFDEFDYDDDKSQIQTSATSLKCPGCPFESLVREVLAKHLVDEHIDGKMCKLCNLEFEDSVAQHCSKHLPEAQTSKRGAAGNSEILECTICSIMFPFRSEYIRHIKTTHSYESWDKNELQCEVCLESFETKYQLARHYRTHPDLKPFNCNMCSKIFRFRFSLNKHIELRHTGDRPRPFECKICSKKFTTKFSLMDHVRRHTGEVPFKCEICSKAFLHNNELKTHMVLMHDINDKKYFKCEICSKIFWRKNPYMEHMRSHSGAEPFKCELCSKIFELSRNLEKHVKICQRTYSCDMCSKKLTTKFGLDAHMRLHTGERPFKCEFCGKTFRYKNNLKIHMAQNHDITDKCCLTCTRCQKVFRNKAYYERHMRVHTGERPYRCEICKMTFGCRSTMKRHTMNIHTDPDQQVREKPTTATTTGNMKRIKDIGADEDSVEEKVTKKRGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00203797;
90% Identity: iTF_00203797;
80% Identity: -