Basic Information

Gene Symbol
ZBTB41
Assembly
GCA_949128065.1
Location
OX421894.1:25989935-26009811[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.00016 0.022 16.4 0.1 1 22 193 214 193 214 0.96
2 24 0.28 38 6.2 0.1 3 23 223 243 222 243 0.92
3 24 0.0071 0.95 11.3 3.1 1 23 290 312 290 312 0.98
4 24 0.069 9.2 8.2 4.2 1 23 319 342 319 342 0.95
5 24 0.00019 0.025 16.2 0.6 1 23 356 378 356 378 0.98
6 24 5.7e-05 0.0076 17.9 1.3 1 23 384 407 384 407 0.98
7 24 7.1e-06 0.00094 20.7 0.2 1 23 413 435 413 435 0.99
8 24 0.00049 0.065 14.9 1.7 1 23 441 463 441 463 0.98
9 24 0.00019 0.025 16.2 0.2 2 23 470 492 469 492 0.97
10 24 8.3e-05 0.011 17.4 0.1 1 22 662 683 662 683 0.96
11 24 6.6 8.8e+02 1.9 0.9 4 23 721 740 718 740 0.80
12 24 0.00065 0.086 14.5 6.2 1 23 759 781 759 781 0.98
13 24 0.016 2.1 10.2 3.8 1 23 788 811 788 811 0.94
14 24 0.0003 0.041 15.6 0.6 1 23 825 847 825 847 0.98
15 24 0.001 0.14 13.9 0.8 1 21 853 873 853 874 0.95
16 24 0.0012 0.16 13.7 2.0 1 23 878 900 878 900 0.98
17 24 1.1e-05 0.0015 20.1 0.3 1 23 906 929 906 929 0.98
18 24 0.019 2.5 10.0 5.3 1 23 1079 1101 1079 1101 0.98
19 24 0.017 2.3 10.1 4.6 1 23 1107 1129 1107 1129 0.92
20 24 0.00022 0.03 16.0 0.1 1 23 1156 1178 1156 1178 0.99
21 24 0.00038 0.05 15.3 3.0 1 23 1184 1207 1184 1207 0.97
22 24 1.4e-05 0.0019 19.8 1.6 1 23 1213 1235 1213 1235 0.98
23 24 0.054 7.2 8.5 3.0 1 23 1241 1263 1241 1263 0.99
24 24 0.0017 0.23 13.2 0.4 1 23 1269 1291 1269 1291 0.95

Sequence Information

Coding Sequence
ATGGAGAAGcctgtaaaatttgaattagaaaaaacaTGCCGTTGTTGTATGATGCAAGATACCGATACTGCGCTTATACCTCTCTTCCAAGGTGAACGCTCGTGTAAAGTCGCCTTACCTGAAATCTTTCAGATAGTATTGTTCTTCAACTTAGGGGTGCAGGAAAATGACGGACTACCACAACAACTATGTTCAAATTGCCTCAGTGAATTTTTAACGGTCAAGAAATTTCGAAAGCGTTGTAAAGAAACACAAGAAAAACTAATAGCATATTTTCCTACGTTCAATCGAGTAGAAATCGTGAAAGAACAGCTTAGAATTGAAAAATTCACCTTTTGCGACGTCGATATTATTGATTGCAGTCAAGATTCAATTGATGAAACAGAATCTGataatattttaacaaaacatTCCGGAGATATGGATTTGGATGAATCGGAAAATGAAAACTCTTGGAAATGTGAATATCTTATTTCAGCTAAAGACGACGATAATGATGATACTAATGATGATGCTAATGAAAATCACGAAGAAGAGCCAAAAACAGAAGATGCCACGAGGGACAACGAACTGAAATACATCTGCAAATATTGCAAACAAGGTTTTCGTGTACCAGGATCACTTACAGTACATATTAGGAAATGTCCTGATCGCAACGAAGAAATCTGTGAATACTGTACAGCTACATTTAAAGCCAGCGAGTTCGACGCTCATATGGAGGAATTCCATAAGGACAATACTGAACTAATGTGCCCAATTTGTCAGCCTTTCAGATATGAACAACAGATTAATATTCATGTGGCACGTTTTCATCCGGAGTCCAGTCAACTGTGTGATATAAAAAAACCCATACGTAATCCAACTAAGCATCAATGCAAGATTTGCGAAAAATATTTATGCTCCGCGTGGGTACTTAAACGTCACATGGAATCACATGATAAAAATTTTCCCGGATATCGGTGTGAGGTATGCAATAAAGTGTGCCGAACAAAATTCATATTAAAATATCACACATTTACTGTGCATTGTATGGAAAATTCGACCGATGAACAACGGAAATATCCATTCAGTTGTACGATTTGTTCGAAAGGATTTTTAACGCCGAATACTCTATCGGCTCATATGAAGACGCACAAGGAAAATCGACAGTATAGTTGCGAAGAATGTGGAAGTGCATTCAAGCGTGATTCACATTTGAAAGGTCACATAAAACGTATGcatttgaaaataaaagaattcgaATGTCCTGAATGTGAGAACAAATTTTCACAAGGTTCCGAATTAAAGGCTCACTTGAGAACGCATACtgATGATAAACCGTTCAAATGTGCATATTGTGATTCAAGTTTCCGACGACCTACTCAGAGGCGAAACCATGAGCGGATACACACGGGCGAGAAACCGTCTACTTGTGAAATTTGTAAGAAAGGGTTTATTAATAATGTTCGGTTGGCTGCGCATATGTTAACGAAACACTCAGCTGACGAGAATCGAATCATTGAAGAAAGGGTTTTGCGAGATTTCGATGTAGACTCTGAGAGTACTGAATACATTAAAGATGATCTCCTCAAGGTGCAGGAAAATGACGGACTACCACAAAAACTATGTTCAAATTGCCTCGGTGAATTTTCAGCGGTCAAGAAATTTCGAAAACGTTGtaaagaaattcaagaaaaactGATGGCATATTTTCCCACGTTCAATCGAGTAGAAATCGTGAAAGAACAgattaaaactgaaaaattcacCTTTTGCGACGTCGATATTATTGATTGCAGTCAAGATTCAATTGATGAAACAGAATCTGATAATCTTTTAACAAAACATTCCGAAGACATGGATTTGGATGAATCAGAAAATAAAAACGCCTGGAAATTTGAATATATTACAGACGACGATAATGATGATATCAATGATGATACTAATGAAAATCACGAAGAAAAACCAAATACAGAAGATGCCACGAGGGACAACGAACTGAAATACATCTGCAAATATTGTAAACAAGCTTTTCGAGTACCAGGATCACTAACAGTACATATTAGGAAATGTCCTGATCGCAACGAAGAAATCTGTGAATACTGTACAGCTACACTTGAAGCAAGCGAGTTCGACTCTCATATGGAGGAATTCCATAAGGACAATACTGAACCAATGTGCCCAATTTGTTATAATTTCAGACATAAACAACAGTTTACTATTCATGTGGCACGACTTCATCCGGACGCCGGTCAAccgtctcatatcaaaaaaccCATACGTAATCCAAATAAGCATCAATGCAAGATTTGCGAAAAATGTTATTGCACCGCGTGGGTGCTTAAACGTCACATGGAATCACACGATAAAAATTTTCCCGGATATCGGTGTGAGGTATGCAATAAAATGTGCCGAACAAAAAACGTGTTACGGTATCACACATTCAGTGTGCATTGTATGGAAAATTCGACCGATGAACAACGGAAATATCCATTCAGTTGTACGATTTGTTCGAAAGGATTTTTAACGCCGAATACTCTATCGGTTCATATGAAGACGCACAAGGAAAATCGACAGTATAGTTGCGAAGAATGTGGAAGTGCATTCAAGCGTGATTCATATTTGAAAAGTCACGTAAAACATGATAAACCGTTCAAATGTGCATATTGTGATTCAAGATTCCGACGACCTACTCAGAGGCGAAACCATGAACGGATACACACGGGCGAGAAACCGTTTACTTGTGAAATTTGTAAGAAAGTGTTTATCAATAATGTTCGGTTGGCTGCGCATATGTTAACGAAACACTCAGCTGACGAGAATCGAATCATTGAAGAAAGGGTTTTGCGAGATTTCGATGTAGACTCTGCGAGTCCTGCAAACATTAAAGATGAGATATCTGAATTTCGAAAACAATGTAATGTAGTTCAGGATAATCTTTCGGTTTATCGTAGACTGATATTGGAGGCTGATGAAAAGATAGTTGAAGATTATAAACCTGAATATTTAACGACTGACTcgGTTTATAAAGATAATGACCCATCCGTTGAAAAAGATGCGAACGAAGACAACATTGACCAAAAATTCTTTAAGGAATGTATCGAAGAAGATTACACAATGGACTTCGAAGAAAATAAGGATTTCGGTCTGTGTATTGAGGAGAAAAAGATAGCAGTCGGCAATGAAGATATAAAGGAGTCACATGGCAACGATGTCACTGTAAACGTATTCATTACACACAATCCGAAAAAGAAATATCAGTGCCAATATTGTGATAAGTCGTTTATGCAAATACACCATAAGGATAATCACGAGAGGGTACATACCGGTGAACGTCCGTACTTGTGTAATATTTGCGGGAGATGTTTCAAACGTGAGCGAGAACTGCATTTTCACGTATTACGGCATGCACaaggaaaggaaataaaagAAAGGGAACCATATGAACGGCTAGGACATAAATATTATAAAGACATGGAAGCTCCTTTTCGTTGTTCGGTTTGTTCAAAAGGTTTTATGGTAGCATATGCACTTGCCATACACATCAAAACACATAGTAAAGATCGAAAATATAATTGCAAAGAATGCGAGTCTAGTTTCAAGCGAGAGGCACATTTGACTAGTCACACGAAGCGCATTCATTTAAAATTGCGATCATTTGAATGTGACCACTGTAATAAACGATTTTTCGAAAAAGGCGAATTAAATGCACATATGGTGACACATAACGATGAAAAACCATTCAAATGTACCTTCTGTTCGAATACATTCAAATGGAAAAATTCCCTTGTTACACACGAGCGGACTCACACACGCCAGAAACAGTTCCTTTGTGAAATCTGTAATAAACGATTTATGGGACGAAACACACTAGTTGTTCATTTAATGTCGCATTCTGATGCACAAAAGAAAATGGTCGAGGAAAGCATTCTACGAAAATTGGACGACTCAGATAACGAAAAAACGGAAGAACATTTCAACGTAACAGTTTTTtga
Protein Sequence
MEKPVKFELEKTCRCCMMQDTDTALIPLFQGERSCKVALPEIFQIVLFFNLGVQENDGLPQQLCSNCLSEFLTVKKFRKRCKETQEKLIAYFPTFNRVEIVKEQLRIEKFTFCDVDIIDCSQDSIDETESDNILTKHSGDMDLDESENENSWKCEYLISAKDDDNDDTNDDANENHEEEPKTEDATRDNELKYICKYCKQGFRVPGSLTVHIRKCPDRNEEICEYCTATFKASEFDAHMEEFHKDNTELMCPICQPFRYEQQINIHVARFHPESSQLCDIKKPIRNPTKHQCKICEKYLCSAWVLKRHMESHDKNFPGYRCEVCNKVCRTKFILKYHTFTVHCMENSTDEQRKYPFSCTICSKGFLTPNTLSAHMKTHKENRQYSCEECGSAFKRDSHLKGHIKRMHLKIKEFECPECENKFSQGSELKAHLRTHTDDKPFKCAYCDSSFRRPTQRRNHERIHTGEKPSTCEICKKGFINNVRLAAHMLTKHSADENRIIEERVLRDFDVDSESTEYIKDDLLKVQENDGLPQKLCSNCLGEFSAVKKFRKRCKEIQEKLMAYFPTFNRVEIVKEQIKTEKFTFCDVDIIDCSQDSIDETESDNLLTKHSEDMDLDESENKNAWKFEYITDDDNDDINDDTNENHEEKPNTEDATRDNELKYICKYCKQAFRVPGSLTVHIRKCPDRNEEICEYCTATLEASEFDSHMEEFHKDNTEPMCPICYNFRHKQQFTIHVARLHPDAGQPSHIKKPIRNPNKHQCKICEKCYCTAWVLKRHMESHDKNFPGYRCEVCNKMCRTKNVLRYHTFSVHCMENSTDEQRKYPFSCTICSKGFLTPNTLSVHMKTHKENRQYSCEECGSAFKRDSYLKSHVKHDKPFKCAYCDSRFRRPTQRRNHERIHTGEKPFTCEICKKVFINNVRLAAHMLTKHSADENRIIEERVLRDFDVDSASPANIKDEISEFRKQCNVVQDNLSVYRRLILEADEKIVEDYKPEYLTTDSVYKDNDPSVEKDANEDNIDQKFFKECIEEDYTMDFEENKDFGLCIEEKKIAVGNEDIKESHGNDVTVNVFITHNPKKKYQCQYCDKSFMQIHHKDNHERVHTGERPYLCNICGRCFKRERELHFHVLRHAQGKEIKEREPYERLGHKYYKDMEAPFRCSVCSKGFMVAYALAIHIKTHSKDRKYNCKECESSFKREAHLTSHTKRIHLKLRSFECDHCNKRFFEKGELNAHMVTHNDEKPFKCTFCSNTFKWKNSLVTHERTHTRQKQFLCEICNKRFMGRNTLVVHLMSHSDAQKKMVEESILRKLDDSDNEKTEEHFNVTVF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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