Basic Information

Insect: Beris chalybata
Gene Symbol: -
Assembly: GCA_949128065.1
Location: OX421897.1:107553549-107555285[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.8 1.2e+03 0.8 0.3 19 38 117 138 115 138 0.91

2 11 5e-05 0.034 15.4 2.0 11 43 135 164 124 165 0.88

3 11 0.035 23 6.3 0.0 18 43 174 196 168 197 0.90

4 11 5.7 3.8e+03 -0.8 0.1 36 44 219 227 216 227 0.86

5 11 0.11 71 4.8 2.9 14 44 254 281 243 281 0.82

6 11 0.014 9.2 7.6 2.2 11 44 308 337 300 337 0.86

7 11 0.00056 0.38 12.1 5.2 10 43 373 403 368 410 0.89

8 11 0.0087 5.9 8.2 1.2 13 44 411 439 404 439 0.87

9 11 6.5 4.3e+03 -0.9 0.5 18 38 443 460 441 464 0.73

10 11 0.25 1.7e+02 3.6 1.0 14 44 466 493 455 493 0.79

11 11 0.00068 0.46 11.8 1.0 14 44 526 553 520 553 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.8	1.2e+03	0.8	0.3	19	38	117	138	115	138	0.91
2	11	5e-05	0.034	15.4	2.0	11	43	135	164	124	165	0.88
3	11	0.035	23	6.3	0.0	18	43	174	196	168	197	0.90
4	11	5.7	3.8e+03	-0.8	0.1	36	44	219	227	216	227	0.86
5	11	0.11	71	4.8	2.9	14	44	254	281	243	281	0.82
6	11	0.014	9.2	7.6	2.2	11	44	308	337	300	337	0.86
7	11	0.00056	0.38	12.1	5.2	10	43	373	403	368	410	0.89
8	11	0.0087	5.9	8.2	1.2	13	44	411	439	404	439	0.87
9	11	6.5	4.3e+03	-0.9	0.5	18	38	443	460	441	464	0.73
10	11	0.25	1.7e+02	3.6	1.0	14	44	466	493	455	493	0.79
11	11	0.00068	0.46	11.8	1.0	14	44	526	553	520	553	0.90

Sequence Information

Coding Sequence: ATGGACAACGTTACGAAAAATACGGACGATTTTCATAGAGAACATGAACACCATGCTGATACAAGTATTGAACTTATTAAAACGGAAAATGACATCAAAGAGTATGGAATATTAAACGAAGAACACATATTAATAGAAGACAGCACTGACGAGTTTACAGAGCTCGTCACTTTGGAAGAAGAGGTATTGTCTGTAGAAGAAGTTAAAGAAGAATCCGAAATCGATATAACGGACAGCTTAAACGAAACGAATCCCAACGAGAACAATTTACAATGTACGAAAATCGTTCAAAGTGAAGAGATTTTAAAAGTCCATAGGAGCGTGCACAGCGACTATTATCCATACGATTGTAAAATCTGTCCACAAAGCTTCCGATATGAATTCGATTTGAAGACGCACACGATAAGGCAACATGGAATGGTTCGATGTAAGCTATGCTCAAAAATATTCGAGAGTAACTCACTATTAAGTCAGCATATTATTCGTTTTCATTTCGAAATGCAAAAATTTAAACCGTTTCGTTGTGACTTCTGTGCGAACGAGTTTGAATATAGTGGCTACTTGGAACGACATCTTCGAACCGTACATGGCGACGGAAGAACGAGATTTCAATCTGTAATTTGTGAAGATATTTTTCGAGACGAAGTCAATTGGAAGGAACACATAAGAACAGAACATCCGAGAAACTTTAAATGTACCATTTGTCCGAAGTCGTTTCAATTTATGTCGCACTTAAATCGACATATGATAGTTCATAGCGATGTACGATTTCAATGCGACATTTGTCCGAAAGAATACAGCCATAAGGACAGTTTGCAGGCGCATATAAAGACTAGCCATAGTAAGAAATCAGAAGCAGCGGTCGAAATAGCAGTTCAACTGCAAAAGCTTTATTATATCCAGAAATATAACAAAGTTGTGCCAAAAAAGAAATCGTTTGAATGCGACATTTGTTCGAAAAAATGCATCAATGAGAAAAGTTTGCAGGCGCATTTAAGGACTAGACATAGTAAGAAATCACAAGCAGATCAACTGCAAGAGTTTTATAAAATTCCCAAACAGAACGAAGTTGAGCAGAAAAAGAAATCGTTTCAATGCGACATTTATAATACGCACACGATAAGGCAACATGGAATGGTTCGATGTAAGCAATGCTCAAAAATATTCGCGAATAACTCTCTATTAAAACAGCATATTATTCGTTTTCATCATCTTCAAACCGAACATAACGATGGAACGAgatttcaatgtaaaatttgtCAAGATATTTTTCGAAACGAAGTCAATTGGAAGAAACACATGAGAACAGAACATCCGAGAAACTTTAAATGTACCATGTGTTCGAAGTCGTTTCAATTCAAGTCGAGCTTAAACCAACATATGATAGTTCATAGCGATGTACGATATCAATGCGACATTTGTCCGAACGAATACAGCCATGAGGAAATTTTGCAGGCGCATATAAGGACTAGCCATAGTAAGAAATCACAAGCAATAGTCGAAATAGCAGCTCAACTGCAAAGGGTTTATATCCCCAAACAGAACAAAGTTGGACAGAACAAAGTTGGACAGAACAAAAAATCGTTTCAATGCGACATTTGTCCGAAAAAATATATCAATGAGAGAAATTTGCAGGCGCATTTAAGGACTAGACATAGAAAAAACGTAAAACCAATATTCGCAATAGCAACTCAACTGCAAAAGGTTCACGATATCCAGAAACAGAACGAAGTTTAG
Protein Sequence: MDNVTKNTDDFHREHEHHADTSIELIKTENDIKEYGILNEEHILIEDSTDEFTELVTLEEEVLSVEEVKEESEIDITDSLNETNPNENNLQCTKIVQSEEILKVHRSVHSDYYPYDCKICPQSFRYEFDLKTHTIRQHGMVRCKLCSKIFESNSLLSQHIIRFHFEMQKFKPFRCDFCANEFEYSGYLERHLRTVHGDGRTRFQSVICEDIFRDEVNWKEHIRTEHPRNFKCTICPKSFQFMSHLNRHMIVHSDVRFQCDICPKEYSHKDSLQAHIKTSHSKKSEAAVEIAVQLQKLYYIQKYNKVVPKKKSFECDICSKKCINEKSLQAHLRTRHSKKSQADQLQEFYKIPKQNEVEQKKKSFQCDIYNTHTIRQHGMVRCKQCSKIFANNSLLKQHIIRFHHLQTEHNDGTRFQCKICQDIFRNEVNWKKHMRTEHPRNFKCTMCSKSFQFKSSLNQHMIVHSDVRYQCDICPNEYSHEEILQAHIRTSHSKKSQAIVEIAAQLQRVYIPKQNKVGQNKVGQNKKSFQCDICPKKYINERNLQAHLRTRHRKNVKPIFAIATQLQKVHDIQKQNEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00202863;
90% Identity: iTF_00202863;
80% Identity: iTF_00202863;