Basic Information

Insect: Bemisia tabaci
Gene Symbol: stc
Assembly: GCA_903994105.1
Location: NW:214059-324858[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 1.4e+04 -4.3 1.6 15 19 484 488 483 488 0.81

2 16 0.16 1.1e+03 -0.6 0.3 4 10 518 524 517 524 0.94

3 16 6.6e-07 0.0045 16.6 9.2 3 18 538 553 537 554 0.95

4 16 0.83 5.6e+03 -2.9 0.5 5 10 579 584 579 584 0.94

5 16 4.7e-06 0.032 13.9 9.8 3 18 592 607 590 608 0.91

6 16 1.1 7.3e+03 -3.3 1.4 7 13 612 618 612 619 0.79

7 16 2.5e-06 0.017 14.7 11.9 3 19 650 666 648 666 0.90

8 16 1.2 8.1e+03 -3.4 0.1 5 10 699 704 699 705 0.90

9 16 0.00061 4.1 7.1 13.5 1 18 710 731 710 732 0.88

10 16 0.01 68 3.2 8.9 1 11 772 782 772 783 0.96

11 16 0.76 5.2e+03 -2.8 0.7 4 10 787 793 786 793 0.89

12 16 1.3e-08 8.9e-05 22.0 10.0 1 19 799 817 799 817 0.98

13 16 2 1.4e+04 -4.7 0.8 12 15 847 850 846 851 0.64

14 16 1.3 8.9e+03 -3.5 11.6 10 19 864 874 853 874 0.81

15 16 0.01 68 3.2 14.3 3 17 912 930 910 936 0.77

16 16 9.5e-05 0.65 9.7 12.9 3 19 943 961 942 961 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	1.4e+04	-4.3	1.6	15	19	484	488	483	488	0.81
2	16	0.16	1.1e+03	-0.6	0.3	4	10	518	524	517	524	0.94
3	16	6.6e-07	0.0045	16.6	9.2	3	18	538	553	537	554	0.95
4	16	0.83	5.6e+03	-2.9	0.5	5	10	579	584	579	584	0.94
5	16	4.7e-06	0.032	13.9	9.8	3	18	592	607	590	608	0.91
6	16	1.1	7.3e+03	-3.3	1.4	7	13	612	618	612	619	0.79
7	16	2.5e-06	0.017	14.7	11.9	3	19	650	666	648	666	0.90
8	16	1.2	8.1e+03	-3.4	0.1	5	10	699	704	699	705	0.90
9	16	0.00061	4.1	7.1	13.5	1	18	710	731	710	732	0.88
10	16	0.01	68	3.2	8.9	1	11	772	782	772	783	0.96
11	16	0.76	5.2e+03	-2.8	0.7	4	10	787	793	786	793	0.89
12	16	1.3e-08	8.9e-05	22.0	10.0	1	19	799	817	799	817	0.98
13	16	2	1.4e+04	-4.7	0.8	12	15	847	850	846	851	0.64
14	16	1.3	8.9e+03	-3.5	11.6	10	19	864	874	853	874	0.81
15	16	0.01	68	3.2	14.3	3	17	912	930	910	936	0.77
16	16	9.5e-05	0.65	9.7	12.9	3	19	943	961	942	961	0.93

Sequence Information

Coding Sequence: ATGCCAACTGAACCAAACTGGTCTTGGAGAGGTAGGAGAGATGACCTGCCGGGTTCCAAGGACCATAATTCAACTCAAGAAGGCTCAGATCAATACCATGATTCAGATATGCAGTCATCGGGTCCTCGCAGTGTACCTCATAAGAGGCAGTTTTTCCAGAATGATAGCTTCAGTTTCTGTGCAGACCTAGATCGGGGTGACTCTCATTCCAATCCTAGAATAGACCCAAGAAATAGATCTCAGATGATGAGGCGTAATCCGCTGAATCAACAGAACCCTACAAAAATTTATCTTCCTGGAAATCACATTAATTCCAGGCACAGTGGACGTAAGAATAGAACCACTCATGATCAGTCTCATTCACACTCATCTGTTTCTTCAAATAACCATTCTGAGTATCCTGATTCTCGAGTTGGTAATTTTAATGCAAATGAATCAATGCTAAAACTGAGTAAATCACGGCACAATCATGAAAGCAAGAACTTGCGTTATAATGCTTTTAGAGATCCTTATACGACAAGGCATAAATTCCCAAAAGACTCCTCTTCTTTCAAAGAGCATGGGCGTAGTCCACATAGATGCTGTATCCCAGGGGAATTGCAATCTGATGAGGGTTCTTCCCATTTTAATTCAAAGGAAACTAGGCATGCTTCTCAATTAAGTGAGTCCAACTACTCCAGAGAATCTGCAAGTAGCTCTAAAGTAGATTCATTTAATCTTAAGTACATTAGGAGCAATTTGCACAGGGGTGGAAGTTGTGCAAGCAAGTGGAGGGACTCGAAGGGGAATACATCTAGAAGTAGTGAATTCAGGTATTATCTTTATTCTGAAGAGGCTTATAATAGTGAGTCTAGATACATCTTTCGTGAGAATCCACGTAATTCCAATGGATGGAGGcctaaaattcaagatgatgAATTACACTATAGGGAGTATTTGAATGATAATGCATGTGACCAATTCAATAATGGAAACCAAAGTGACATCCAGCGCAACAAGTCCAAGTTTACATCAGGCTCATCCAGATCTTTGAGACTCAATTCACATACAGGTCGACTCAATTGCAGCAAGTCAAGGCTTAATTCTCGTAAAAACCAATTGGACCTAGTCAAATCAAATTTGAACCCAACGGCAGAAGCATTTCAACCAAAGGAATCAAGATCCGAAACTCTAATTCAATCATATCCACCTAACAATCCAGgtaaagaaaaaagtttcccacagaaatttcaaacaaaaaaggCTTTAATCTGTGATAATCAGGATGACATATCCCGAAGATCCCGACTCACTGAGCAGCTAAATCGTGGGACACTGGAGTGCCTTGTTTGTACAGATTATGTTCTCCAAGCAGACAGAGTTTGGAACTGCATTGCCTGTTATAATACCTTCCACCTAAAATGTATCATCAAGTGGTCAGACTCCTCTAAAAGTGATGCAGGATGGCGATGTCCAGCATGTCAAAACGTAACAGCAAAGATACCACAAGATTACATGTGTTTCTGTGGCAAGGCAAAACTATCCAGTGGATGGAATCGTGTTGATAATGCACATAGCTGTGGAGAGATCTGTGGACGTACACAAAAAGTGGAGCCCTTCTACAAACCATGCATTCACAGTTGTACCCTCCTTTGCCATGCTGGACCTTGTCCAGCATGTATTGTCATGGTATCCAGAGAGTGCGGTTGTGGGAGGACTTCTCAGTCGGTGCAATGCAACTCAAAGCTGGTGATTACCTGTGATAGTCTCTGCTCAAAACCTTTGAACTGCCTTAAACATTTCTGCCAACAGCCATGCCACTTTGGCGAGTGTCTGccatgcaatgaaaaatttgaagaagctTGCCACTGtggcaaagaaataaaaacggtAATCTGTGGAACAGTGCCCTTAAATGATGCACGTTTCAATTGTGGCAAGCTATGCAATCGGATGCTGCGCTGTGAAACCCATAAATGCAAAAAAGTTTGTCACGAGGGAGAATGCGAGCTGTGTAAGTTCCTCCCAGACAAGGCAAAAACATGTTGGTGTGGGAAAACATCTTTAACACTAGATCAACTTTGTTCAAGACAATCTTGTGCAGATCCTTTGCCAACCTGTGATGCTATCTGCGGAAAAATTTTTTCCTGTGGCCCACCTCTCAAACACCACTCATGTCAAGAAAAGTGTCATGAGAATTCATGTCCCATGTGCGTGCTTAAAACATCTGTCAAATGTTGTTGTGGGTCCATGAGTAAGGAGATCAATTGCTCTCAATTAAAAACCAAAGCAGCTAAATTTCAATGCACCAAGAGATGTACAAAAaaaCGGACTTGTGGAAGGCAcaaatgcaataaaaattgtTGCATTGACACAGAGCACATTTGTCCATCTATCTGCAATCGTCGACTCACTTGTGGATTACATGTCTGTGAAATGCTTTGTCATCCGGGCAACTGCCTACCATGCTCTAATATCAGTTTTGAGGAACTCTCCTGCCACTGTGGCCAAACTGTGTCACTTCCTCCCATTCCTTGCGGAGCACGTCCTCCGAAGTGTAATGGTCCCTGCCTGAGGGAACATGAATGCAAACATGAACAGACTCACAACTGCCACTCAGGAACAACCTGTCCTCCGTGTCCGGCTCTAACAACTCGCAAATGTTTTGGTGGTCATGAGACTCGGAACACTATTCCATGCCACATTAAGGAGTTTTCATGTGGTTTGCCATGCAACAAGCCATTGCCATGTAAAACGCACAAATGCATCCAACCATGCCATAAAGACCCCTGCTCCAAGAAAGGAAAATCCTGCAGCCAGCCATGCCCGAAACCTAGGGCTTTGTGCAGACATCTTTGCGGGAAGGCTTGTCATTCTGGCCCTTGCCCTGTTAGGCCGTGCAAAGAACTGGTTAAAGTCAGTTGTCAGTGTGGCCATCGGACCTCTTCTGTAGCTTGTTTTGAAAACAATGCTGAGTACGAGAAAATCATATCCGCAGAGGCTGTCCGAAAATCATCAAACTTGCACTTTGGTGGAGTGGCCATGGAATTAAGCAATTTAACTTATGGAGTTGATGCTAAAACATTAACTATAAAGAAGCTGGAGTGCAATGGTGAATGTGAGCTCTTAGAAAGAAATCGAAAGCTTGCTTTGGGGCTTCAAATTCGGAATCCTGATCTAAGTGCCAAACTAGTCCCGCGCTATTCGGACTTTATGATGCAGTGGGCCAAGAGAGATATTCTGTTCTGTCAATGTGTCCATGAGAAATTGGTTGACCTAGTTCATTTAGCCAAACAGTCAAAGCAGAAAAGTAGGAGTTTCTCTTTCGAGGTTATGAATAGAGCCAAGAGGCAGTTTGTTCACGAATACTGTGAACATTTTGGTGTCGAGTCTGTATCCTATGACGCAGAGCCCAAAAGAAATGTCGTCGCAACAGCATCAAGAGACACCTCATGGCTCCCAAGTTACAGTTTGATGGAGGTCATTCAGAGACAGAATGGTGAACGAAAAATTCATGTCCCTGTTCAGAACTCAACGAAAAGTAACAGCACAGCTACAAGgaaaaatgaaatgCCAGTAATGCAACCTTCGGCACCAGTAGATCAACCGTCCTGCTGGACTTTACTTACCAAACCTCAACCCACTGAATGTGCCTCAACTTCCCGAAAATTCAAGAAGCCAGACTATTTTAGtgataatttctaa
Protein Sequence: MPTEPNWSWRGRRDDLPGSKDHNSTQEGSDQYHDSDMQSSGPRSVPHKRQFFQNDSFSFCADLDRGDSHSNPRIDPRNRSQMMRRNPLNQQNPTKIYLPGNHINSRHSGRKNRTTHDQSHSHSSVSSNNHSEYPDSRVGNFNANESMLKLSKSRHNHESKNLRYNAFRDPYTTRHKFPKDSSSFKEHGRSPHRCCIPGELQSDEGSSHFNSKETRHASQLSESNYSRESASSSKVDSFNLKYIRSNLHRGGSCASKWRDSKGNTSRSSEFRYYLYSEEAYNSESRYIFRENPRNSNGWRPKIQDDELHYREYLNDNACDQFNNGNQSDIQRNKSKFTSGSSRSLRLNSHTGRLNCSKSRLNSRKNQLDLVKSNLNPTAEAFQPKESRSETLIQSYPPNNPGKEKSFPQKFQTKKALICDNQDDISRRSRLTEQLNRGTLECLVCTDYVLQADRVWNCIACYNTFHLKCIIKWSDSSKSDAGWRCPACQNVTAKIPQDYMCFCGKAKLSSGWNRVDNAHSCGEICGRTQKVEPFYKPCIHSCTLLCHAGPCPACIVMVSRECGCGRTSQSVQCNSKLVITCDSLCSKPLNCLKHFCQQPCHFGECLPCNEKFEEACHCGKEIKTVICGTVPLNDARFNCGKLCNRMLRCETHKCKKVCHEGECELCKFLPDKAKTCWCGKTSLTLDQLCSRQSCADPLPTCDAICGKIFSCGPPLKHHSCQEKCHENSCPMCVLKTSVKCCCGSMSKEINCSQLKTKAAKFQCTKRCTKKRTCGRHKCNKNCCIDTEHICPSICNRRLTCGLHVCEMLCHPGNCLPCSNISFEELSCHCGQTVSLPPIPCGARPPKCNGPCLREHECKHEQTHNCHSGTTCPPCPALTTRKCFGGHETRNTIPCHIKEFSCGLPCNKPLPCKTHKCIQPCHKDPCSKKGKSCSQPCPKPRALCRHLCGKACHSGPCPVRPCKELVKVSCQCGHRTSSVACFENNAEYEKIISAEAVRKSSNLHFGGVAMELSNLTYGVDAKTLTIKKLECNGECELLERNRKLALGLQIRNPDLSAKLVPRYSDFMMQWAKRDILFCQCVHEKLVDLVHLAKQSKQKSRSFSFEVMNRAKRQFVHEYCEHFGVESVSYDAEPKRNVVATASRDTSWLPSYSLMEVIQRQNGERKIHVPVQNSTKSNSTATRKNEMPVMQPSAPVDQPSCWTLLTKPQPTECASTSRKFKKPDYFSDNF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -