Btab005448.1
Basic Information
- Insect
- Bemisia tabaci
- Gene Symbol
- nfxl1
- Assembly
- GCA_903994105.1
- Location
- NW:2172331-2188897[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.67 4.5e+03 -2.6 1.3 14 19 176 181 176 181 0.85 2 17 0.15 1e+03 -0.5 0.8 4 10 212 218 211 218 0.95 3 17 4.1e-08 0.00028 20.5 15.1 1 19 226 243 226 243 0.99 4 17 0.00033 2.3 8.0 14.0 3 19 280 296 268 296 0.91 5 17 2 1.3e+04 -4.1 1.6 6 10 321 325 320 325 0.89 6 17 1.7e-09 1.1e-05 24.9 15.3 1 19 331 349 331 349 0.99 7 17 2.1e-07 0.0014 18.2 12.0 1 18 384 401 384 402 0.97 8 17 2e-05 0.14 11.9 15.8 3 18 438 453 436 454 0.92 9 17 1.5e-05 0.1 12.3 14.2 1 18 463 480 463 481 0.94 10 17 0.42 2.9e+03 -2.0 1.0 5 10 509 514 509 514 0.95 11 17 0.0015 10 5.8 4.8 9 18 530 539 528 540 0.91 12 17 0.03 2e+02 1.7 10.8 1 12 549 559 549 559 0.96 13 17 1.2 8.1e+03 -3.4 3.5 14 19 584 589 584 589 0.88 14 17 0.00096 6.5 6.5 4.8 1 12 625 636 619 646 0.89 15 17 0.00028 1.9 8.2 14.6 3 19 658 674 657 674 0.91 16 17 1.2 8.4e+03 -3.4 2.4 13 16 711 714 708 715 0.67 17 17 1.2e-06 0.0078 15.8 14.2 1 19 719 739 719 739 0.95
Sequence Information
- Coding Sequence
- ATGGCTCCACCTGCAAGAGGACGAGGAAATGTTTGGGCTGGAGGAAATCCCATCAGTAAAGCTCCATCTGCAAGAGGACGAGGAAATGTTTGGGCTGGAAGAAATCCTCCTGTACCTCAGATGTCCCAAGCTGAACGTAATTTCCAAGAAgccaagaagaaaaatgaagaaaatgtgaAGCGAGCCCTTGAAAACAATTACGAAACATCTTCAGACGAAGATGAACTTGATACTAATCAGGATAACTCCGACAAATCATCAGTACTCTCATCAGTCCTGAAAGCATACGCCAACTTAGGAGGCTCTGTTAGTCATATTGGGAGAACTGAGCATGACATAGAAAGTCAACTTCAATCAGGAGCTATTACGTGCCTTATCTGTATAAGCAGCGTCAAACGACCAGAACAAATATGGACTTGCCAAAAgtgtttttgcatttttcaccTACAATGTATGAGGCTTTGGGTGCGTGACAGTGTCTCCCTCAAAAGGATCAAGGAGCCTGGGAAACATAATGTTAATTGGAATTGTCCAAACTGTCGGAGTGAATATGAGCCGAGTGAAGCACCTGAgcgttatttttgtttttgtggaAAAACAGAAAACCCCCAAGTTCACCCATGGCTTATCCCACACAGTTGCGGTGAAACCTGTGAAAAACCGCTACAGCCATTTTGCGGTCACTATTGTCTTCTCCTTTGTCATCCTGGACCATGTCCACCTTGTCCAAAAACAGTAACGTCTAAGTGTTATTGTAAAAACAGTTCAAAACAGCAGAGATGTGGAGCACAAGAGTGGTCCTGTGGGACAATATGTAAAAGGCCGCTTTTGTGCAAAAAACACAACTGCACACAGGTTTGTCATAAGGATGATTGCGCAGCTTGTCCGAAACAGTCCAGCCAAAAGTGTTTTTGTGGCACCTCAACACAAACAAGACCATGTGCCTCTCCTCAGTGGCAATGCACTAAAGTCTGTGGGAAGCCTTTAGACTGCGGCAACCATGTGTGTGAAACAGTTTGTCACAGTGGCCCGTGCAAACCGTGCCCAATAAATGGTGTACGGACATGTTCCTGTGGTAAAACCACCTATGATCTGCCTTGTAATGTACCTGTACCCAACTGCGGGGATACCTGCGATAAACTGCTTGAATGTGGATCTCATAAGTGTATCCAAAGATGTCATAATGGTAAATGTGGGTTGTGTCTAGAAAGGATTGTAAAGGCATGTCGTTGTGGCAGAAATTCGAAGGAAGTTCCTTGTGCCAAGCCTTTTTTGTGTGAGACAAAGTGCAAGAAAACGAAGGATTGCCTGAATCACCCTTGTAATCGGAAATGCTGTGATGGAAATTGTCCGCCGTGCGAAAAAAAGTGTGATAAAACCTTAAGCTGTCACAATCACAAGTGTGGTAGTATGTGTCATCAAGGACCATGTTTTCCATGCATGCTCAAAGTGCCAATCACTTGTAAGTGTGGTGGTACTAAAATCGAAGTTCCCTGCGGGACCAAAAAAAGAATCAAGCCGCCAACGTGCAACAAGCTTTGCAAgtTGCCATCTGCGTGTCACCATCCTCACAGGGAGGAAAGGCACAAATGTCATTTTGGGTTTTGCCCACCTTGTGAGCAAAAATGTAATCTCAGATTAAAATGTGGACATCACTGTCAGGCTAGATGTCATTCTGCAGTTGTTGTAGATGTCACTCCCAAAAACTCTACTTTGAAGGGAGTTGTAAATAAAGctcagaaaaaattaccatGCCCTGAGTGCAAAGAGCCTGTGATTATATCATGTTTAGGGGGCCATGAGCAAATGACTGTTCCGTGTAAAGAAGCTAAACCTACCGCCTGCGGCAATGCGTGTGGAGCACCTCTCGAATGTACTAATCATTTTTGTAATAAGCTTTGCCACGATAGGAAAaTGGAGAAATGTGAAAGCTGTGATCGCCAGTGCGAGAAACCAACCCTGGAAGGTTGTACACACCCGTGTCTCATGACTTGTCATCCAGGGAAATGCAAACCTTGTACAATGCTATTGAAGAAGCGATGTCACTGCAATGTAATGCAGAAGTACATAAATTGTGTTGATTGGTGCTCAAGTGATGCTgagcagaaaattaaattgcagtcTTGTGGAGGACCATGCCCTAAAACGTTACTTTGCGGACATCCATGCACAAAATTGTGCCACCCGGGCGAGTGTCCAAATGCAGACCCTTGCCGgaagaaaactaaaatttcttgtTCTTGCAACAGGATCAAAGTTAGTGTGTCCTGCGATCAGGTTCGAGCTGGCAAAATAGTTGAATGCGATGATGTGtgcaaaaaacagaaagaagCTGAGATCCagcgaaaaaaatcggaagaggcTGAACGAGAGAAAATTCAGAAACAGAAAGAACAGGAAGAATTTGAAGCATATCagaagaaaatgtcacgaggGCCAAGAAGGAGGAATGACCAtcgaagaagagagggaaaggaGTCTCACTCTGTTGATCATTACAAACTCATCATATTAGGTTTTGCCGGTTTACTTTTATGCGCACTTCTGACTTACTACTTTATGAGTTAG
- Protein Sequence
- MAPPARGRGNVWAGGNPISKAPSARGRGNVWAGRNPPVPQMSQAERNFQEAKKKNEENVKRALENNYETSSDEDELDTNQDNSDKSSVLSSVLKAYANLGGSVSHIGRTEHDIESQLQSGAITCLICISSVKRPEQIWTCQKCFCIFHLQCMRLWVRDSVSLKRIKEPGKHNVNWNCPNCRSEYEPSEAPERYFCFCGKTENPQVHPWLIPHSCGETCEKPLQPFCGHYCLLLCHPGPCPPCPKTVTSKCYCKNSSKQQRCGAQEWSCGTICKRPLLCKKHNCTQVCHKDDCAACPKQSSQKCFCGTSTQTRPCASPQWQCTKVCGKPLDCGNHVCETVCHSGPCKPCPINGVRTCSCGKTTYDLPCNVPVPNCGDTCDKLLECGSHKCIQRCHNGKCGLCLERIVKACRCGRNSKEVPCAKPFLCETKCKKTKDCLNHPCNRKCCDGNCPPCEKKCDKTLSCHNHKCGSMCHQGPCFPCMLKVPITCKCGGTKIEVPCGTKKRIKPPTCNKLCKLPSACHHPHREERHKCHFGFCPPCEQKCNLRLKCGHHCQARCHSAVVVDVTPKNSTLKGVVNKAQKKLPCPECKEPVIISCLGGHEQMTVPCKEAKPTACGNACGAPLECTNHFCNKLCHDRKMEKCESCDRQCEKPTLEGCTHPCLMTCHPGKCKPCTMLLKKRCHCNVMQKYINCVDWCSSDAEQKIKLQSCGGPCPKTLLCGHPCTKLCHPGECPNADPCRKKTKISCSCNRIKVSVSCDQVRAGKIVECDDVCKKQKEAEIQRKKSEEAEREKIQKQKEQEEFEAYQKKMSRGPRRRNDHRRREGKESHSVDHYKLIILGFAGLLLCALLTYYFMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -