Btab005954.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bemisia tabaci
Gene Symbol
pnr
Assembly
GCA_903994105.1
Location
NW:972877-998041[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.7e-18 1.8e-14 52.6 3.2 1 34 685 717 685 719 0.96

Sequence Information

Coding Sequence
ATGACAACTAATCCATTCGGTCTCAAATCGAAGTTGTTTCAAATCTGTCGTCTTTGTTTATCAGAAGAGGATGTAAAATGGTCTTTATTCGACGATGATGGACTAAAACGCAATTTTCCCTGCAAGATTCTGTCGTGTCTCTGCATTCCGGTTTCCCAGTTTGATCCTCTACCCACATATATTTGTGAAAAATGTGCACGCAAATTGGACGAATTCTATGACTTCAAGCAAGCCTCTAGAAAGTCTGATGAATACCTGAAAAGCAATTTGCATTCATTTTCTCAGGAAATTTGTATGAGCAATAGACTGAAAGGCAAGGTGAAGCAAGATAATGATCAGCTAATTGCCCAAGATATGTCGTTACATAAATCGGACAATAAATCAAGATCCCAGTTGATCAGTGGTTCTTTCCAATCAGAAAATTTAAGgtgtaataattttaaatcagaACCAAAGTGTAATCAAAACGATAGATATTACAATTTACTTACCAGTATTAATGGTATAAGTGCCCCCTCAAAATCCACATCCTCTTTTACTGACACTGACGAGAAAATTCAATCAAGGAATGTCATGAACTCCCCATCCCAACCCAGTTCAAACGGACGCAATCCCAATACATTGCACAACCGTTCAGAGAAAGAACTTATCGCCAgtgattcaattttaaatttaaacacGGAAGCTCGAGAAAACTCTCCTGAGGCGGAAGTGAAAAAGGCGTCTACTGGTGTTTCTGGAAATGCTGTGATGTATGCCAATGGATATTTCAGTGAGGTCCCTGATGATGACTCAAACAACAACAGTGGAGTTTTAAACCTGGAGATGAAGTCGAAAAAGCAGCGTGTTGAGAGTGAAACGCGACCCACTCAGTTGAAACCAGATAGTGTTGAAGACTCGGAAGATGATTCCAAGAGAGGGAGCTCTCGGCTTTCCAGGGAGGATCCTTCGGACAACGAGAATAAAAGTCATGCTGACTTTGAGGATGATAACAATGAAGATGCTGATGTCAGTAGTGATATAACTGAAAGAAGTCCCACAAGTATGCTGAGGAGAACATTATTACTGAACCATCAGGATGAATCTCGGTCACCTCTAACAATAATGAATGGAGAAGTTGTGCTGGGTGCTAAAAGGACGAGTAGTGGCCGACGCAAGCAAAGCTGTCCTCTGAGGGCAAGCGAGATTAGGTTCCGTTATAAATTCAACGCTGacaatgaaattgaaggcgaaaacgCAGATGGGCGCAACAGTGATATTGGCAGTATGTCCGATGCCGGTGCAAGTTCAGATGCGGATAACCACCGATTTGATGATATGGGTGCTGCAAGATCTCTTTATATTGAAAATTCTTTGATGGGCAATGGTTCGGTTGATTCAGCAGATTGCATGGATATTCCCATTGAAACggttGCGGAAGAAGTCATCGGAGATGGTGAGGACAGGTCAGAAGAAGATCACCTTCAAAGCCGATTGATTGCTGCTGCTGCCCAATTGCCTTCACCGCGAAGTGACCTAGGAATGGACGAACACCTCGTGATTGATATGAATGGTGCAGTTATGGGCTCCCCGAGGGTTTACTCTGATGGTGAAGTCCTTCTCAGTGAGCGTGATATCGAAAGGGCAAATATTGAAAGAGCAAGAGCAATTGACATTTACAACGTTCTGAATCAAGCTCGAAGACTTCCTGTTGGACCTGCAATCCCATCGCGGCGGCCACCTTTGTCGCGAGCCGCATCCTCCTCACCATCCCCATCGCCTTCTCCTGTTCCGCATAATGCTATGAGCCAGCTCTTGATAGCAGCTCAGTTGGCAGCAGGAGGAGAAGTATTCGACGCCCCAAGCTCCTCAAACCCACGCCGTGTGCAACCTTGGAGTGATAATCCACTTATTGGCAGGCCTGGTCCAAGTCACTTGAACGTCGAGCAGGATTATCGTCCCCAGAACCTTAAAAAACATTCGCAGCGCCGGCAAAAATCTGCTGGCGTGCGAACATCAAGAGCTGCCGGTGGATCTCGCTTATCAACAGCAGCAAAAAGAAGTGACATAGCATGTTCAAACTGCGGAACCCAAACGACAACAATTTGGAGACGCAATCCTAAGGGTGAAATGGTTTGCAATGCTTGTGGTCTTTACTACAAACTCCACTTGGTCGATCGGCCGATCGCAATGCGCAGGGATCAGATCCACTCGCGGAGGCGGAGACCTCAGTCAGACCAAAATGACCAAGAGCAGAGCGAGCTCTCTGAAAACGAAAGCATGAAAATCGAGCCACCCTCCCCTGCCTTGCCCCAACCGCCGGCCCGGAGACGTAAGTCTGCTAAGATTTCTAAAAAGTTCCAGTCCAGTCCAGTTCTTAGTTCGCATCTGGAAGGACGCGGGTATCTATGCGACTCACCAGACGACCAGTCGGAGCGAGAGAGAATCAGAGATTCTATGCAAAATGGAAATGAGGACACTGTACCAGTTCTACCCGACATGGCCATGCTATCAGCTATCCGCTCCCAGTTGACGCCTGAACTTTTAAGAGGTTCTCCAATCCTTAATACCCCTACCATCAAGAACTCAATTTCAATGTTAAAGCCACGCGGCGCGCCCTGA
Protein Sequence
MTTNPFGLKSKLFQICRLCLSEEDVKWSLFDDDGLKRNFPCKILSCLCIPVSQFDPLPTYICEKCARKLDEFYDFKQASRKSDEYLKSNLHSFSQEICMSNRLKGKVKQDNDQLIAQDMSLHKSDNKSRSQLISGSFQSENLRCNNFKSEPKCNQNDRYYNLLTSINGISAPSKSTSSFTDTDEKIQSRNVMNSPSQPSSNGRNPNTLHNRSEKELIASDSILNLNTEARENSPEAEVKKASTGVSGNAVMYANGYFSEVPDDDSNNNSGVLNLEMKSKKQRVESETRPTQLKPDSVEDSEDDSKRGSSRLSREDPSDNENKSHADFEDDNNEDADVSSDITERSPTSMLRRTLLLNHQDESRSPLTIMNGEVVLGAKRTSSGRRKQSCPLRASEIRFRYKFNADNEIEGENADGRNSDIGSMSDAGASSDADNHRFDDMGAARSLYIENSLMGNGSVDSADCMDIPIETVAEEVIGDGEDRSEEDHLQSRLIAAAAQLPSPRSDLGMDEHLVIDMNGAVMGSPRVYSDGEVLLSERDIERANIERARAIDIYNVLNQARRLPVGPAIPSRRPPLSRAASSSPSPSPSPVPHNAMSQLLIAAQLAAGGEVFDAPSSSNPRRVQPWSDNPLIGRPGPSHLNVEQDYRPQNLKKHSQRRQKSAGVRTSRAAGGSRLSTAAKRSDIACSNCGTQTTTIWRRNPKGEMVCNACGLYYKLHLVDRPIAMRRDQIHSRRRRPQSDQNDQEQSELSENESMKIEPPSPALPQPPARRRKSAKISKKFQSSPVLSSHLEGRGYLCDSPDDQSERERIRDSMQNGNEDTVPVLPDMAMLSAIRSQLTPELLRGSPILNTPTIKNSISMLKPRGAP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-