Btab005077.1
Basic Information
- Insect
- Bemisia tabaci
- Gene Symbol
- grn
- Assembly
- GCA_903994105.1
- Location
- NW:4868962-4981922[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-20 2.6e-16 58.5 4.7 1 35 331 364 331 365 0.98 2 2 2.3e-19 6.2e-16 57.3 6.8 1 35 388 421 388 422 0.97
Sequence Information
- Coding Sequence
- ATGGACATGACAAGTGCGGAGCCCAGTACTCATCGGAGTTGGTACGACACTACCTCCGTGGGTAGGGGCGAGGATGCCATCGACAACATGGCCTCTTCGGTGGTTGAGCACATGAGTTCCTTGTTCGTATCGCACCATGGCGCGGGTCTCGAACCCAGCCCTCGGGATTACCGTGCTCCCTACCAAATCTCTCGCTATTACCACCAGCAAATGCATTCACCTTACGCCTCAGCTGCCTCACACGCGGCAGCGAGGCAGGTATGTCGGCCGCCACCCCACTTCGCGCATGCGCACCACGGCTCGCTCCACTCGTGGCTGAGCAACGACACGAAACAGCAGCACCACCAGGACTCGAGTTGGTGCTCACCGTTCAACAGCTCGAACGAGTTCCCGAGCATAAAATCGCCGACGGGGAACAGCCAAAGTCATTCGGGGCTCACGAGTAGTCATTCGGGGAGCGGGGGAGgcggaggcggcggcggcggtggaggcgggagcgggggcgggggcaCTTCCTCGGCCCCTGCGACGTCCTCCTCGTCGACCTCATCGACGCACCCCATGTTCAGCTTCCCCCCGACGCCCCCGAAGGACGCGACGCCGGACAGCGTCACGGCTGCGTCGACGATCAACACGTCAACTTCCTCGACGTCGAACGAGTACACGAACGCGATCGCCCACGCTGCCTCGATGGGCGTCGGTGTCGGTGTATTCCTTCACCCCGAACAGACTGGCTCATGTGATATGAAACCCATGCTCAACTCGGGCTCCTCAAAGCAACGAGAAGGTACTAACTCCTCGTCTGGGACCGCCTCTCCCAGTAGCTCTAGTTCCTATCCGCCTTACCAACTCGATTCCTATTCCTATCCCTACCACCACCACTCACCTGTCCCCATGTTCAAACATCAAAACTCATCTAATCAGTTAGTTAAATCGTCGACGGCAACCTCCAGAAACAAGTCTAGAACAAGTGCCGCAGAAGGTCGCGAGTGCGTGAACTGCGGAGCAACGTCAACGCCCCTTTGGCGTCGGGACGGCACCGGACACTACCTCTGTAACGCCTGCGGATTATATTATAAAATGAATGGCCAAAACAGGCCGCTAATTAAACCTAAAAGAAGACTGTCATTACAATCGGCCGCGCGGAGAGCAGGGACTAGTTGTGCAAATTGTAAAACAACGACAACGACCTTATGGAGGAGAAATCAAAATGGGGAACCTGTATGCAATGCGTGTGGCCTTTACTATAAGCTACATAATGTAAGTTGGATTTCATGCTTAATTTGTTAG
- Protein Sequence
- MDMTSAEPSTHRSWYDTTSVGRGEDAIDNMASSVVEHMSSLFVSHHGAGLEPSPRDYRAPYQISRYYHQQMHSPYASAASHAAARQVCRPPPHFAHAHHGSLHSWLSNDTKQQHHQDSSWCSPFNSSNEFPSIKSPTGNSQSHSGLTSSHSGSGGGGGGGGGGGGSGGGGTSSAPATSSSSTSSTHPMFSFPPTPPKDATPDSVTAASTINTSTSSTSNEYTNAIAHAASMGVGVGVFLHPEQTGSCDMKPMLNSGSSKQREGTNSSSGTASPSSSSSYPPYQLDSYSYPYHHHSPVPMFKHQNSSNQLVKSSTATSRNKSRTSAAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVSWISCLIC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -