Basic Information

Insect: Bemisia tabaci
Gene Symbol: -
Assembly: GCA_903994105.1
Location: NW:3414280-3437133[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0061 0.28 11.4 0.8 2 23 627 649 626 649 0.92

2 23 3.9 1.7e+02 2.6 0.6 3 12 656 665 654 668 0.85

3 23 0.00049 0.022 14.8 2.5 1 23 676 698 676 698 0.97

4 23 1.6 71 3.8 0.2 3 12 734 743 732 749 0.82

5 23 1.6 73 3.7 1.9 1 23 754 776 754 776 0.95

6 23 3.8 1.7e+02 2.6 0.2 2 20 796 814 795 816 0.93

7 23 0.0018 0.079 13.1 0.5 3 21 895 913 894 914 0.96

8 23 0.00091 0.041 14.0 0.7 3 23 946 967 945 967 0.96

9 23 0.68 31 4.9 0.4 1 20 1042 1061 1042 1063 0.92

10 23 0.042 1.9 8.7 3.1 1 23 1074 1096 1074 1096 0.98

11 23 7.7e-07 3.4e-05 23.6 2.0 1 23 1100 1123 1100 1123 0.97

12 23 0.0016 0.072 13.2 2.3 1 23 1156 1178 1156 1178 0.94

13 23 0.65 29 5.0 2.9 1 14 1184 1197 1184 1206 0.81

14 23 0.0065 0.29 11.3 4.7 1 23 1212 1235 1212 1235 0.98

15 23 0.1 4.5 7.6 1.5 1 21 1241 1261 1241 1262 0.94

16 23 0.00048 0.021 14.9 0.2 3 20 1280 1297 1280 1299 0.95

17 23 0.078 3.5 7.9 0.9 1 23 1306 1330 1306 1330 0.93

18 23 0.44 20 5.5 1.5 1 23 1335 1358 1335 1358 0.86

19 23 0.72 32 4.9 1.9 1 21 1364 1384 1364 1385 0.94

20 23 0.0023 0.1 12.7 0.1 2 23 1406 1428 1405 1428 0.94

21 23 0.48 22 5.4 2.6 1 23 1436 1458 1436 1458 0.97

22 23 2.7 1.2e+02 3.0 0.9 1 20 1468 1487 1468 1489 0.90

23 23 3.6 1.6e+02 2.7 4.4 1 23 1608 1631 1608 1631 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0061	0.28	11.4	0.8	2	23	627	649	626	649	0.92
2	23	3.9	1.7e+02	2.6	0.6	3	12	656	665	654	668	0.85
3	23	0.00049	0.022	14.8	2.5	1	23	676	698	676	698	0.97
4	23	1.6	71	3.8	0.2	3	12	734	743	732	749	0.82
5	23	1.6	73	3.7	1.9	1	23	754	776	754	776	0.95
6	23	3.8	1.7e+02	2.6	0.2	2	20	796	814	795	816	0.93
7	23	0.0018	0.079	13.1	0.5	3	21	895	913	894	914	0.96
8	23	0.00091	0.041	14.0	0.7	3	23	946	967	945	967	0.96
9	23	0.68	31	4.9	0.4	1	20	1042	1061	1042	1063	0.92
10	23	0.042	1.9	8.7	3.1	1	23	1074	1096	1074	1096	0.98
11	23	7.7e-07	3.4e-05	23.6	2.0	1	23	1100	1123	1100	1123	0.97
12	23	0.0016	0.072	13.2	2.3	1	23	1156	1178	1156	1178	0.94
13	23	0.65	29	5.0	2.9	1	14	1184	1197	1184	1206	0.81
14	23	0.0065	0.29	11.3	4.7	1	23	1212	1235	1212	1235	0.98
15	23	0.1	4.5	7.6	1.5	1	21	1241	1261	1241	1262	0.94
16	23	0.00048	0.021	14.9	0.2	3	20	1280	1297	1280	1299	0.95
17	23	0.078	3.5	7.9	0.9	1	23	1306	1330	1306	1330	0.93
18	23	0.44	20	5.5	1.5	1	23	1335	1358	1335	1358	0.86
19	23	0.72	32	4.9	1.9	1	21	1364	1384	1364	1385	0.94
20	23	0.0023	0.1	12.7	0.1	2	23	1406	1428	1405	1428	0.94
21	23	0.48	22	5.4	2.6	1	23	1436	1458	1436	1458	0.97
22	23	2.7	1.2e+02	3.0	0.9	1	20	1468	1487	1468	1489	0.90
23	23	3.6	1.6e+02	2.7	4.4	1	23	1608	1631	1608	1631	0.92

Sequence Information

Coding Sequence: ATGGCGAAATCGTCAAAATCAGTGCTGTACCAAAATCTTGCCGGAGAATCATTAGTAATAGACACCAAATCATCTTCCTATAGAGATGTTATTCTTCAGAAAGTAAAACTGAAATACACTGAAGCAGTTCCATCATTTTCAAAGAGAATTGAGCAGAGATTTGCCGTTGACAAATTAGTCTCTGGACAGTGTCGAATATGTGGATTGAAAGAAAAGTCatgctgcaaaatttttgaaaccgaTGAAACCCTGAGCAAGCTTGTGAATACTTACATGCCAATCACGGTACATAAATATGACGTGTTACCGCTAAATGTTTGTCTCGAGTGTTTGGGAACCCTGCAAACCATTGATGATCTTGCATACAGATGTTATCTCACAGAAGCGTGCTTATTGCAACACTACAAAGATTATAAAGACACTTCAATATTCCTGGACCCAATTCAGGAGgaagaagaaaaaccgTACACACCATTGCATTTGCGGTTGCCAAGAAGTAGGGAAACTCCTCACCTAGCCGCAACTGTTGGGTTTCCTGCAAGGAGGAAAGGTAGCTCCATACATGGTCGGTTTTATACTGAAAGTGATAAGATACAAGAGACCTTGAACCAGAGTAAAGCTGAAGCCCAAATCTCGCTAAACCAACAGAATGATGAGGGAGATGAATCTCCCACTGAAGACTATGTCTTTGAGGAATCAAACCCTGTGGAAACAATGGAAAtcgatgatgatgataatgagGAAAAAGAAGTTGTCAAAAATTGTCTCAAAGCCAATCTCCACAAAATTCTCCTTGGTGGAAATTCGACTAAGAGATCAACCACCTTAGTTTCAAAACATGCCCCAATATCAACCAATCAGTCTCAAAGTCAGAATCTCTCGCATGACCATGCATACAGTCATCTAAAACCAAAGAAGGTCTCTACTTCGCCTGGAGCTAACGTATCCAACGTTCCTGCTTtcttctcaaattcaaaaatccaaactCTGGAAGAAGCTGATGCAGTGAAGAATATAGCTACTGAGGCTCTGGCTGAATTGGACAAAAACTCACGAGATAACAGGACATTGTTGAAtctttcggaaattttaaataccACAAGTCAAGAGCTAGATGAACCTGTGTATATCATTCTAGTCAACGACGAGGATGCAGAGAAGTCAAAGCAACAAACTAACACCCACAAGCCGAAGTTTATCAATCTAGCTGTTGACACCATCGAACCACCGGAGACAAACCAACAGATTAACAATACAACTGATCCCTCAGGAACTGAGACCCAAACTactgaaaaattatctgaaagtaTGGATGTAGAAAACCACCCCGCAGACGATGATTGTCAAGTCATCAAGGAATCAGAAACTCCCAGCATAACTGGAAATGATCAAGTTGATGAAATAGTCTCCACTAATGAAGGAACTGGAGTCAATCCTGATGAAGAGCTAGCCAAGTTTTCAGAATCCCTTCAGACAGAACAGATTAAGAGGTGGTTCacaatacaaattttgaaaacaccaaATGAAGGTGAAGAAACCAAAGATGAAGATGAAGGTGTCATGCTGGTCACGTACGTTGTTTactactcaaaaataaacaacaaactGGTtcctcatcatttctctctgatGAATGATTCTTTCACAGAGGTCACTCGTCGCCGAGCTTACTCGATCATCAGCACCATGTTAAAAGAGGAGAAGAATCGAGTTCTTCAATACTTAGAGAATAATCCAcagaaaaaaccacaaaaaagtccAAAACCAGCAGCCCCTAAACTTCCACCCAAGAAGCCGTTCAGGACAACTTGCTGCTTCTGCAATAAAACTATGAAAGAGCAAGAATTGACCGCTCATTCAGTTGCTAATCACATGGTACGCTGCAAGTATTGTCGAGTGATTTTCACTTCCAAAGATGAACTGATACTACATGAATGTGAGGTTCACGAAAAGAAATCAACGGATTGTGAGAcgtgcaataaaaaattctacgATGAAGAAGATAAATTCTTCTGCTCTCATAATTTTAATTGCTCCATTTGCAAGAAGCAGTTTACCGACTGGAATGAGTACCTGCATCATGAGAAAATTCACGCCAATTCACTTGCCCTCAAATTCATTCGAGACTTCAGAGTGGACTTCAATCGTACAAATCAGTGGACGAAAAGTGAAGAGACTGAGAAAGTCTATAACTTTGGGTGCTCCACTTgtggaaaaaagtttgaaagcaTGGTTGAGATGGAGCGGTGTGATCACTTGTATGATTGCCGAGTGTGCAAAAATCAATTCAGTAACTATCCTCTGTTTGTCACTCATGGTTGTATCCACAATCCGGAACTGCTCAGAATTGTctgcaagaaaaaatcacagaagaaGctcATTGTCCAGTGCGGACTTTGTGAGGAGCAATTTCATGAACAAAAGGATTACTTGGCTCATTACTATAACTGCATGCTAAAGCATGGTGTCCAAGTGGATCTATCAGAGGAAATAAAGGCATTGCAGACCAATTCACCTGTCAATTGTATCTTCTGTGGTGAATATTTCAAGTCCATCTTTATCTTTGAACTCCACTATAATCAATGCTTCAAGATCAATTCTACAGAATGTGATGAATGTGACGCAATAATTCCATCTAGACTTCGTGGTTCTCATTTACTGTACTGTGACACAAAGACCTTGTGTGATAACTGCGGAACAACGTTCCCCTCAAAAAAATTGTATCGCCAACACCTGAGGCAGCAGCTAGATGGCTCAACTGTTTGCATCACATCAAGTGACTTCAAAGATTTTTCATTCAATGGCTACATATCAGAAGGGTTTGATCCAAACAACTGTCATATCTGTGGTAAAATCTTTGTGAATGGCAACACCCTCGATCGCCATGTGAAGAGCGTCCATCTAGGCCTGGAAAAATCTTGTCCGCTGTGTGGAGTGAAGTTCCAGAAACACAATTCAATAACCATGTTCTTACGACATCGCAAAACCCATCCAGAAGATGAATTGaaagaTATATCGTGTGGAGAGTCCTATGGAAGTACCCAATGTCCGACGTGCGAAAAATGGTTTTCATCCAGGCTTCTGAAACTTACACACGAAATATACTACCATGATAAGATTCTTCACAAATGCGAAGGTTGTGAAACAGAGTTCCTTAATTTAATCAATTTGAGAAGTCATGAGACAAAGTGCAAACCAATGAGGAAGGACAGATCTGTATATACTTGTGAGCACTGTGAAGCAACTTTCCCGAAAGTACACTTGTACTACCAGCACCTCGAAACTCATGATATTACTTATACCTGTGAAGAATGTGGGAAAACCTTCAAGAAGAAAACCAATTTGAGCAAGCACAAGGAAACAGCACACACCAAAACTCCAACAATTTGTGATGTGTGTGGAAGAGAATTTTCATGCGAGAAATATTGCAAGATTCACAAACGAAACTTGCATGGGGACCAGAGCTTCCTTTGTCAGATTTGTGGTAAAACATTCCATAACAGTAAGAGATTGAAATTACATGCATCAGTACACTCCGGATTGAAACCTTACAAATGTCGCTTCTGTGAAAAGAGTTTCCGAACACACACAATCAGGAACGTCCATGAAGATAAACACAAGAACGATTTTAGATATGAGTGTAATTTCTGCCAGCATAAATTCTCACGATTCATAAACCTTTACGTTCATAAAAGGAAGGTTCATGCAGACAAATGCACGTACCAATGTTCAAAGTGTGGATGTGGTTACAATGACGTTGAGTTCTTCACTAATCACCAAGCGAAATGtggaggaaagaggaaaaggCCGAAGCCAGGCGTTGAAAGAGCCACATGGTGTCCCTACTGTGACAAGACGTTCGGTTCTGCCaaacttttaaaagctcattatTCCCAAGGTAGTGGTGATGGAAACTTTGTCTGTAGTAATGGCGCCTGTGGTAAGAGATATGATACAGATTGCTCACTGAAAATGCATGAAAGAGTTCATGCTGTTGACAAATTCCAATGCAAGCACTGCAAAGAAGCCTTCCTCGGACTGAAGCAACTAGAGCTTCATTCTCAACTGCAACACAATGATAAATTTGCTTTCCATTGTACCCGCTGTGGGCGTGGTTACATGTTcgagaaatttttagaaaaacacgTCAAGTACTGCAATGATTCACTCCAGCAGCTCGCTTATACTGTAACCAAGTCTAAAAAGCCTATTGTCCGCTGTGAAAACTGTGGTTTGatatttgcaaaattcaaagacCTCCGTGTACATATGACACTCGCCCATGGTAGTGAAACTTACAAAGATTATCAATGTCTTATTTGTGACAGTCAGTATGATTCTTACATCCAACTTTCGAAGCACTCGAAACATCATTTCAAAGATGCAACAAACCCTGGCTCATATTGTTGTCCCAAGTGTAAGATCCAAAGCTCCGACTGGGAGGTGATGATGAATCATGTGTGCGGGAGCGTACTTCCAAAACGTGGTGAATCCAGCAGGTTTGGCAATCTTGAAGGCCCTCCTCATATTGAAAGTGAAAGCAAACTTCCCAGGAAGAGTCCTCGAAAACCAGTGCCCAAGTATGACTCTGATGATGATTATGTGACTCCGCAAAGTCGCTCTGTCAACTCTCGTCATCATGCAGCTTCATCCTCACATTACAGTGCTGGTCCCAGTTATTCGAGGACAGGTGGAAAAAGTAAACCATCAGGCAGGTTCAGCTCAAAATCTGTGGTCATACAAGAAGATGAGTACGCAAGTGAAGAGTATGAGGAGGAGATGCCATCGCATCCAATCGTAAATGAAGATGCCAACCTTATCTATCATTGCTCATTCTGTAGTTCTAATTTTGATCACATTCAAACGCTACAGAAGCACTTGACAGATGACCACAATCTTAGTTTAAATAGCCTTGAGTTTCAGTTAGTTGAGTGA
Protein Sequence: MAKSSKSVLYQNLAGESLVIDTKSSSYRDVILQKVKLKYTEAVPSFSKRIEQRFAVDKLVSGQCRICGLKEKSCCKIFETDETLSKLVNTYMPITVHKYDVLPLNVCLECLGTLQTIDDLAYRCYLTEACLLQHYKDYKDTSIFLDPIQEEEEKPYTPLHLRLPRSRETPHLAATVGFPARRKGSSIHGRFYTESDKIQETLNQSKAEAQISLNQQNDEGDESPTEDYVFEESNPVETMEIDDDDNEEKEVVKNCLKANLHKILLGGNSTKRSTTLVSKHAPISTNQSQSQNLSHDHAYSHLKPKKVSTSPGANVSNVPAFFSNSKIQTLEEADAVKNIATEALAELDKNSRDNRTLLNLSEILNTTSQELDEPVYIILVNDEDAEKSKQQTNTHKPKFINLAVDTIEPPETNQQINNTTDPSGTETQTTEKLSESMDVENHPADDDCQVIKESETPSITGNDQVDEIVSTNEGTGVNPDEELAKFSESLQTEQIKRWFTIQILKTPNEGEETKDEDEGVMLVTYVVYYSKINNKLVPHHFSLMNDSFTEVTRRRAYSIISTMLKEEKNRVLQYLENNPQKKPQKSPKPAAPKLPPKKPFRTTCCFCNKTMKEQELTAHSVANHMVRCKYCRVIFTSKDELILHECEVHEKKSTDCETCNKKFYDEEDKFFCSHNFNCSICKKQFTDWNEYLHHEKIHANSLALKFIRDFRVDFNRTNQWTKSEETEKVYNFGCSTCGKKFESMVEMERCDHLYDCRVCKNQFSNYPLFVTHGCIHNPELLRIVCKKKSQKKLIVQCGLCEEQFHEQKDYLAHYYNCMLKHGVQVDLSEEIKALQTNSPVNCIFCGEYFKSIFIFELHYNQCFKINSTECDECDAIIPSRLRGSHLLYCDTKTLCDNCGTTFPSKKLYRQHLRQQLDGSTVCITSSDFKDFSFNGYISEGFDPNNCHICGKIFVNGNTLDRHVKSVHLGLEKSCPLCGVKFQKHNSITMFLRHRKTHPEDELKDISCGESYGSTQCPTCEKWFSSRLLKLTHEIYYHDKILHKCEGCETEFLNLINLRSHETKCKPMRKDRSVYTCEHCEATFPKVHLYYQHLETHDITYTCEECGKTFKKKTNLSKHKETAHTKTPTICDVCGREFSCEKYCKIHKRNLHGDQSFLCQICGKTFHNSKRLKLHASVHSGLKPYKCRFCEKSFRTHTIRNVHEDKHKNDFRYECNFCQHKFSRFINLYVHKRKVHADKCTYQCSKCGCGYNDVEFFTNHQAKCGGKRKRPKPGVERATWCPYCDKTFGSAKLLKAHYSQGSGDGNFVCSNGACGKRYDTDCSLKMHERVHAVDKFQCKHCKEAFLGLKQLELHSQLQHNDKFAFHCTRCGRGYMFEKFLEKHVKYCNDSLQQLAYTVTKSKKPIVRCENCGLIFAKFKDLRVHMTLAHGSETYKDYQCLICDSQYDSYIQLSKHSKHHFKDATNPGSYCCPKCKIQSSDWEVMMNHVCGSVLPKRGESSRFGNLEGPPHIESESKLPRKSPRKPVPKYDSDDDYVTPQSRSVNSRHHAASSSHYSAGPSYSRTGGKSKPSGRFSSKSVVIQEDEYASEEYEEEMPSHPIVNEDANLIYHCSFCSSNFDHIQTLQKHLTDDHNLSLNSLEFQLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -