Basic Information

Insect: Bemisia tabaci
Gene Symbol: zfh1
Assembly: GCA_903994105.1
Location: NW:1005899-1020267[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.4e-06 0.00015 21.6 0.2 3 23 169 189 168 189 0.98

2 11 3.6e-05 0.0016 18.4 3.4 1 23 198 220 198 220 0.97

3 11 0.0047 0.21 11.7 5.1 1 23 226 248 226 248 0.97

4 11 1.4e-06 6.1e-05 22.9 4.1 1 23 255 277 255 277 0.98

5 11 0.085 3.8 7.8 0.4 1 23 283 306 283 306 0.95

6 11 0.00011 0.0051 16.8 2.5 1 23 320 342 320 342 0.98

7 11 1.7 74 3.7 0.8 2 23 351 372 351 372 0.87

8 11 9.1 4.1e+02 1.4 2.8 1 23 378 405 378 405 0.79

9 11 5e-05 0.0023 17.9 4.2 1 23 411 433 411 433 0.98

10 11 2.3e-06 0.0001 22.2 2.5 1 23 439 461 439 461 0.98

11 11 1.1e-06 4.9e-05 23.2 2.6 1 23 467 489 467 489 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.4e-06	0.00015	21.6	0.2	3	23	169	189	168	189	0.98
2	11	3.6e-05	0.0016	18.4	3.4	1	23	198	220	198	220	0.97
3	11	0.0047	0.21	11.7	5.1	1	23	226	248	226	248	0.97
4	11	1.4e-06	6.1e-05	22.9	4.1	1	23	255	277	255	277	0.98
5	11	0.085	3.8	7.8	0.4	1	23	283	306	283	306	0.95
6	11	0.00011	0.0051	16.8	2.5	1	23	320	342	320	342	0.98
7	11	1.7	74	3.7	0.8	2	23	351	372	351	372	0.87
8	11	9.1	4.1e+02	1.4	2.8	1	23	378	405	378	405	0.79
9	11	5e-05	0.0023	17.9	4.2	1	23	411	433	411	433	0.98
10	11	2.3e-06	0.0001	22.2	2.5	1	23	439	461	439	461	0.98
11	11	1.1e-06	4.9e-05	23.2	2.6	1	23	467	489	467	489	0.99

Sequence Information

Coding Sequence: ATGAGCGCAACCCAGCCCAAGCTTGAAGATCTTTGCCGTTTTTGCGCCAAATTCTCTGATACAGCGATGCCCATTTTCAATGCTGACGGTAATGAAGAAATTTTGGGAATGATTAGAAGATTAGTTCCTTTTGAAatataTTCTTGTGATGGATTACCTCAAAAAAGTTGTGAAACATGTCTTATGCACCTGAAATCATTCAAGCAGTTTTTAGACGCCTGCATTCAAGCAAACGAGAAACTCAGAAACCTCAGCTTTCTGCTGTCTGATGAAGGCTGTAATTCTGATGAGccATCTCTCTCTGATAGTTTTGGCCTTGGAGCAGCTGGAGAATCCCCAAAATCTGTAGCTATTCCAGCAGAAGAAGCACACTTTAAAAATGAAGCAAGATCAGAAGAGTCGATCAAAGTACATCAAAATTGTCGAGATGAAACAGTCCATCATGATTCTGACTCGCAACTTCATTCGGTCCTAGAAGCTCAACCCTCAGCTGCATTTCTTCTGTGTGACATTTGTGGCAAAGTTTTTGAGCGGGCCAACAATCTAAGGGTACACAAAGCAACACATCTTGAAGATGCCTTGAAGAAAAAGCATGTTTGTTCTACATGCGGAAAACGTTTTTTCTCTAGATTTCAGCTGACAGAACACCAAAACGTTCATCTGGGTCTGAAACCTCACCAATGTGATCTGTGCGACAAAAAGTTTCATAAAAGAATTTTGTTACGTCAGCACAAACTAATACACCTCCCAGAGTCAGATCTTTTTGAGTGCTGTAAATGTGGTTTGAAGTTCAACCGTAAAAGTAATCTCAAAGCCCATGAGCGGACCCATAGCAGCACCCGCAGTTTTGCGTGCCGTGTTTGCTCCCTAACCTTTGGAGAGATGCGATCGTTATTATCACACAGGAGACTAGAACATATAAAAAAGACCGAAGAATCTGTCGTTGTCAGTATGgagCATCGTTGTATGACTTGTGACACATACTTTGAAAATGCTGACTCACTAAGTCAACACATGAAAACTCACAAGCAGAAAGAAAACAAGCAGGCCCAGTGCAAAATATGCAGACAAGTGGTTAACACAAAAGCCCTGAAATACCATGAAATGTCAAAACACTCAAATAAAAGGCCTTTTCAATGTTCATATTGCTCAGAAGAATCCAAAGAAGTCGGATTCATGTCATTTGGTCTGCTTAAAAACCACGAGAGACTTCACACAGGACAGCGACCTTTTAAGTGCGACTCTTGTGAAAAATCATTTCGTAGTCGGAAAAGTCTTCGTCAGCACAAGTTGAAACACTCAAACCTTCGAAATTACGAATGCAACTTTTGTACCAAACGGTTCAAAACCAAGGGTACCCTTAAAGTTCACTTGAAAATTCACACAGGAGAGAAACCCTATGTATGTGACCAGTGCGGTCACTCATTTATCCAAAAAAGTGATATGATGAAGCATCAAAGGAGGCATTCAAACCATAACTTAGATGGCAAGGTAGAACTCGAACCTACCACTTCCTATCTACTCTCCAAAGAACACAATCCTGCAGTCAAAACAGTCGATGTTGCTGCTGTGGTATTGCCAGAGCATGTTCAAAAGATGCTGAATTTGACTAACACTTCAATATTTCCGGGTAACTTCATTTTAGCAGACCAGCATTTTACAGGTCATTTTTCGGCTGAGTCCAACGTCATCGATTCTCAACGGAATGAAATCAAGATGAACAACAGTAGTGAAGGTAGGCTCGTGACCAGTGCAGATGGTCAAGATGGCCCTtgcatcagagaaaatttcaacgGTAATGCATTGAGTTCTCTCACTGCACCGTCGCTAATGACAGATGATAGTGATATTGTAATTACGAACTTATCCCTCAGTCTTTCGGGATCTTTAAATTCTAGCAGTGAAGCACCAAGCTGA
Protein Sequence: MSATQPKLEDLCRFCAKFSDTAMPIFNADGNEEILGMIRRLVPFEIYSCDGLPQKSCETCLMHLKSFKQFLDACIQANEKLRNLSFLLSDEGCNSDEPSLSDSFGLGAAGESPKSVAIPAEEAHFKNEARSEESIKVHQNCRDETVHHDSDSQLHSVLEAQPSAAFLLCDICGKVFERANNLRVHKATHLEDALKKKHVCSTCGKRFFSRFQLTEHQNVHLGLKPHQCDLCDKKFHKRILLRQHKLIHLPESDLFECCKCGLKFNRKSNLKAHERTHSSTRSFACRVCSLTFGEMRSLLSHRRLEHIKKTEESVVVSMEHRCMTCDTYFENADSLSQHMKTHKQKENKQAQCKICRQVVNTKALKYHEMSKHSNKRPFQCSYCSEESKEVGFMSFGLLKNHERLHTGQRPFKCDSCEKSFRSRKSLRQHKLKHSNLRNYECNFCTKRFKTKGTLKVHLKIHTGEKPYVCDQCGHSFIQKSDMMKHQRRHSNHNLDGKVELEPTTSYLLSKEHNPAVKTVDVAAVVLPEHVQKMLNLTNTSIFPGNFILADQHFTGHFSAESNVIDSQRNEIKMNNSSEGRLVTSADGQDGPCIRENFNGNALSSLTAPSLMTDDSDIVITNLSLSLSGSLNSSSEAPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -