Basic Information

Insect: Bemisia tabaci
Gene Symbol: -
Assembly: GCA_903994105.1
Location: NW:2885661-2898323[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.022 0.96 9.7 0.3 1 23 45 68 45 68 0.95

2 19 0.23 10 6.4 0.2 2 23 124 146 123 146 0.95

3 19 0.22 9.7 6.5 0.4 1 23 255 278 255 278 0.89

4 19 0.21 9.4 6.5 0.1 3 23 283 306 281 306 0.86

5 19 0.0028 0.12 12.5 0.5 1 23 697 720 697 720 0.95

6 19 3.2 1.4e+02 2.8 0.1 1 10 735 744 735 754 0.92

7 19 0.0036 0.16 12.1 2.2 2 23 765 787 764 787 0.96

8 19 0.00056 0.025 14.6 2.7 1 23 827 850 827 850 0.94

9 19 0.021 0.94 9.7 0.2 1 23 857 880 857 880 0.96

10 19 0.0028 0.12 12.5 1.1 1 23 887 910 887 910 0.97

11 19 3.5e-05 0.0016 18.4 0.8 1 23 916 938 916 938 0.98

12 19 1.1e-05 0.0005 20.0 1.8 1 23 944 966 944 966 0.98

13 19 2e-06 9.1e-05 22.3 3.5 1 23 971 993 971 993 0.98

14 19 5.9e-05 0.0027 17.7 2.9 1 23 999 1021 999 1021 0.98

15 19 0.00027 0.012 15.6 4.0 2 23 1028 1049 1027 1049 0.96

16 19 4.3e-06 0.00019 21.3 0.7 2 23 1056 1077 1055 1077 0.97

17 19 0.00015 0.0067 16.4 0.6 2 23 1088 1110 1088 1110 0.92

18 19 0.00037 0.017 15.2 0.2 3 23 1118 1138 1116 1138 0.97

19 19 1.1 50 4.3 0.3 2 23 1145 1167 1144 1167 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.022	0.96	9.7	0.3	1	23	45	68	45	68	0.95
2	19	0.23	10	6.4	0.2	2	23	124	146	123	146	0.95
3	19	0.22	9.7	6.5	0.4	1	23	255	278	255	278	0.89
4	19	0.21	9.4	6.5	0.1	3	23	283	306	281	306	0.86
5	19	0.0028	0.12	12.5	0.5	1	23	697	720	697	720	0.95
6	19	3.2	1.4e+02	2.8	0.1	1	10	735	744	735	754	0.92
7	19	0.0036	0.16	12.1	2.2	2	23	765	787	764	787	0.96
8	19	0.00056	0.025	14.6	2.7	1	23	827	850	827	850	0.94
9	19	0.021	0.94	9.7	0.2	1	23	857	880	857	880	0.96
10	19	0.0028	0.12	12.5	1.1	1	23	887	910	887	910	0.97
11	19	3.5e-05	0.0016	18.4	0.8	1	23	916	938	916	938	0.98
12	19	1.1e-05	0.0005	20.0	1.8	1	23	944	966	944	966	0.98
13	19	2e-06	9.1e-05	22.3	3.5	1	23	971	993	971	993	0.98
14	19	5.9e-05	0.0027	17.7	2.9	1	23	999	1021	999	1021	0.98
15	19	0.00027	0.012	15.6	4.0	2	23	1028	1049	1027	1049	0.96
16	19	4.3e-06	0.00019	21.3	0.7	2	23	1056	1077	1055	1077	0.97
17	19	0.00015	0.0067	16.4	0.6	2	23	1088	1110	1088	1110	0.92
18	19	0.00037	0.017	15.2	0.2	3	23	1118	1138	1116	1138	0.97
19	19	1.1	50	4.3	0.3	2	23	1145	1167	1144	1167	0.91

Sequence Information

Coding Sequence: ATGAGTGGGGAAGTGGAAGCAAATTTTGACCCAACAGGTAATGATTCCTTGGTCGACACAGTTCTCATAGTTCAAAATGAAGGTCTAGAAACATCATCCTTTTTTGTCCCTTCGCTCAAGGAGAACAGAACCTATGAATGTAAACAGTGCCAAGATGTCTTCATTTCCAAAGATAAACTAGCGCTTCACTATGTGATGAATCACAAATTTGAGTTTTGCTCAATTTGTATGGAGGTTGCTGAAACAGTTGACTTGCTCAAGGATCATCAGTATGAGCAACACTTTCCGCTGCGGTGTGAATCTTGTCAATTTATCACAAACTCAATTGAAGATATGTCCTTTCATCGAGAAGACAATCACAAATTATTACCTTGCCCATTATGCTCAGTAATGTTTAACAGTAGTTTAGAACAAGAGAATCAtgtgaagagaaaacattttgttttatcaaaagaatttAGCATTGATAATGGCATAGTCTCTGACTGGGATCTCATGAAATGGGGCTACAAATGCCTTTTGTGCAATAAAATTAGAGAGAAGCGTGAAATAGTTGGACATTTCCGAGGCTTTCACCGTTTGTCCATTTACGCTTTAATCAAGAatctattttctcaaaatgtcaTAATTCCTGTTATTGGTACAATCAATTCAGCTAAAACTACCGGGATGCCTCAACCAATGAAGAATTCATCTTGCTCTTCATGTAATTATTCAAGCGTTATCCCAGAACTAGCCCACAATGTCTTATGTTTCGGTGAGTTTCTATGCAAATATTGCCCATCATCATTCCCTTCAGAGGATCAACGAGAAGTACATAAAAGTCAAGAGCATAGCAAGCTTGAATGCAAACTGGAATGTGAAGATGCTGCTTTCAAAACTGAAGATACGCTGCAAACTCATTACATGACCGTTCATAAAGCGAGAATTTGTAATTTATGTGAAATAACAGTACCGCTCCCAGATATCTCTATGAAAGACCAtctgaaaaatgtgcataaatacACAAATCTACTCACTGAATGTGAAGCTGACCTGACGATTTTCAAAGCAGAAGAGAAAACTAATGGCTTCCTCCTGAGCTGTGTCTTGTGTGGATTTGATTTATCGTCTGCTTTTGTTGACGTTCCTGTCCTATTTGACCATATCAGTCAGCACAATATCAATTTGAATGTTGCATTGTACCTCCTTGATGACCTTGGATTTTTCAGAAAgagattcaatttcaaaggtaaaattgaagttgagtcaagtgttgccaaagaaaaaatatctacTCAGAGTTCAGTGATACCAGAAAGCCGAGAGGAATCAATTCCTGCCACTCCAGAAGATTCCCAGCCAAATCATTTAAAACATCAATCAGACTCagaaactgaggaaattgaaggCAAGACAGATGACCTGTTTGTGGATGACCACTTCCTGCACTCTGTTATTGGTAAAAACAAAGGTAAGtccaaattttaccgaaaaaagaCATCATTGaccaataaaaataatgatgaagaAAGTACTTTTGATCATCTTTCTGGTGATAATATGGATGAGAGCTGTTCAGAATACGATCCTAATGAGGAAGACTCAAGTGACGATTCAGACCTGGACTTCGAGAAGCAGAAAAAGTCATCTGATCAAAtggatgatgatgataatgatggTCTTGAACTGTTTAATGTAATTCCAGAAATAGACCCGAATGAAGTTGAATGCTACGTAACTGAGAGTAGTGAtgttgatgatgatgaagaagtTGAGGCTCGaagcatcaaaattgaaaatttagatcTCAACAAAGAGCTTGATGACATCCAACTTTTGGGCAGAAATTCTGACAAAAACAGCACCTGTAGTAGTTATTTTATCAGCAGTGTCAAAATAGGATTAAACTGGTTAGAGCACCAACCTGATGGATTCTTCTGTGAGGTCTGCAGCGGAAAGTTTGAACCGAGAGAAGGACTGCGCGAGCTGTTGAGGCATATGAAAATTCTTCATGGTTTCAAATCAAATGTCAGTACGCAACACATGTTAAGTCAGTTTGATAACTTTGGACGTGTGAAGGAGGTCTTCTCTCATATTGGACCagTTTTTCCATGTCCATTCTGCCCCATTCGGTCTTCCTCAAAGAGACTATTACGACGGCATGCGATCAAGTTCCATGGAAACACCTGGTTGCAAGACCCACCCGAAGGACCGATGGCTTTCAAGTGCTCCATTTGTCCCACCAATTTCTGGCAGATGAATGAGAGGTCAGCTCATGAATATGCAGATCATGCGGATTCAGCCATCCTGCGATGTTACCATTGTTGGGAGCCATTTTTCAGAAAGataaTGCTCAATCAGCATATCAAGAAGTCCCACCCAGATGCGCCTCTCTATACGACTGTCTCTTACAAGTGTCGTCAGTGTCGAGCTCTTTGTCCTTCATTCGAAGTCCTTCGAAATCATTTCAGAGATAAACATCCACATATCACCGTATTTCGATGTCCTCACTGTGATGTCACGCTGAAAACCAAAAAGTCCTTAAAAGCGCACTTTAAGGGCCAGCATCTGCAAGAATCTGGAATGTACGAATGTGATCAATGCGGTAAAACAGTGTGGAGCAAGCGAGCGCTTGGTGCGCACCGAAGGTTGAAACATATGAACTCCAGACTTGGTTTCAGATGCCGTCTATGTGGTTTGCGATTTGCTAATAAGGATGAAAGGAAATTACATTACCAAAGCGTACATGTCGGTGAGAGTCCTTATCATTGCAATGAGTGCGGAAAAGGTTTTGCATCAAAATCAGGATTGTACGGTCATCGGCAAGTTCACAAATCCACAGATTACTTCAAGTGTCAGTATTGTGAGAAGGAATTCACTCGTAAAGATAGCTACAATGAGCATCTTTTAATTCATATAGGTCCACGACATAGATGCCCACACTGTTCCAAAGAATTTGTTCAGCGATCTAATATGATTCGTCATATTAGAATACACACTGGTGAGAAACCCTACAAGTGCACTTATTGCGACAAGACTTTTAGCGATAAGGGAGCGTGCAATTCTCACGTACGTGTTCATACTGGGGAAGAGACTTGTGCTTGTCCATTCTGTGGTCAAACTTTCTCGAAGAAACAGaaattgaagtATCATGTTAGGAAACATACAGGAGAAGGTCTTGTCTCATGTGAAGTATGTAACAAAGTTTTTACGAACAGTTACACACTCAAGGAGCACAGGCTCACACATGCAAAAACAACAAAATCTTCTAAAGAGGCTGTCTGCAAGCATTGCGGAGAATCTTTTGACTCCTCTAAATTCTTACAAAGGCATGCTGCTATAGCTCATACAAGTGGTGTTATTTTTGGATGTCCGTTTTGTGAGAAAATATTTactcagcaagcaagattgcgTTCTCACATCATGGCTCATGCAGATGTGAAGCATCTTAGATGTTTACTCTGCGAGGATGCTTACTCAGAACGACGCGAACTACAAAAGCACTTGGCCCAGAAACATGATGTTGACAGCGGGAGCCCTCATTACTTAACTTGCTTTCGAATTGTGACACCAGAAGAAATCGGCCTGTACATCCCTATGTTCCATGAAGACGACTTCAGTCAGCAAACAAATCTAGAAAGAGATAAGATCCTTCGTGAATATTTTACCGCTTTGACCTCGGGAAAAATCCGGAGCAAGGACAATCAGACTGTAAAGTTTAACTTTAAATTACtagcaactaaaaaaaaacgtaGGAGTAGAGCCAAACAAAGTGCCAGTAGCTCCAAACAAGACGATGGCAATAACCTACCGTACAATTTAAGAGAAAATCCACTTAATCATGATTCTGATAGTAATGAAGCATCTGTTATCAATCAGTTTGAAGATCAGTTTGAGGACCCTGCTGATCAGGTATATTTGGCGCACCTTGCAGAACCAGAATTAGCATTCTCAGCATTTGACAATCTAGGGATTGAAAGTAAAAGACTAAAGCTAGCCGATTGTAATTTAGATGTTTCCTCTTGCGATTTAATGGAAAGTtcttcccctaaaaaatttgcCTTGCCAAATTCTACCAAAAAACGCGAAAAGCAGAAGCGAAAGTCCAAAGCGTTGCCACCAAGAAAACTTCAAATCGCTGAAATACCAAGTGATGAAAGTGAAGATTTTAGTCGTCTCACTGATGGCCCATCCACAGTTGGTGAGAGTGTGAGTGAAGAGTTACCGAGAATCCCTAAAATAACTGTAAAAAAGAGTATGTTAAAAGAATCAAAATCTTGGGCAATTGAATCAAGTAAACTTGGTGATTGCCTGCAAGTGGACGGAAGTAATCAAAATACCACTAATGTCTCTGTCAGTTTTAGCGATGATGAAGAAAGTAGTGATGAAGACACAGATGACAGTTAA
Protein Sequence: MSGEVEANFDPTGNDSLVDTVLIVQNEGLETSSFFVPSLKENRTYECKQCQDVFISKDKLALHYVMNHKFEFCSICMEVAETVDLLKDHQYEQHFPLRCESCQFITNSIEDMSFHREDNHKLLPCPLCSVMFNSSLEQENHVKRKHFVLSKEFSIDNGIVSDWDLMKWGYKCLLCNKIREKREIVGHFRGFHRLSIYALIKNLFSQNVIIPVIGTINSAKTTGMPQPMKNSSCSSCNYSSVIPELAHNVLCFGEFLCKYCPSSFPSEDQREVHKSQEHSKLECKLECEDAAFKTEDTLQTHYMTVHKARICNLCEITVPLPDISMKDHLKNVHKYTNLLTECEADLTIFKAEEKTNGFLLSCVLCGFDLSSAFVDVPVLFDHISQHNINLNVALYLLDDLGFFRKRFNFKGKIEVESSVAKEKISTQSSVIPESREESIPATPEDSQPNHLKHQSDSETEEIEGKTDDLFVDDHFLHSVIGKNKGKSKFYRKKTSLTNKNNDEESTFDHLSGDNMDESCSEYDPNEEDSSDDSDLDFEKQKKSSDQMDDDDNDGLELFNVIPEIDPNEVECYVTESSDVDDDEEVEARSIKIENLDLNKELDDIQLLGRNSDKNSTCSSYFISSVKIGLNWLEHQPDGFFCEVCSGKFEPREGLRELLRHMKILHGFKSNVSTQHMLSQFDNFGRVKEVFSHIGPVFPCPFCPIRSSSKRLLRRHAIKFHGNTWLQDPPEGPMAFKCSICPTNFWQMNERSAHEYADHADSAILRCYHCWEPFFRKIMLNQHIKKSHPDAPLYTTVSYKCRQCRALCPSFEVLRNHFRDKHPHITVFRCPHCDVTLKTKKSLKAHFKGQHLQESGMYECDQCGKTVWSKRALGAHRRLKHMNSRLGFRCRLCGLRFANKDERKLHYQSVHVGESPYHCNECGKGFASKSGLYGHRQVHKSTDYFKCQYCEKEFTRKDSYNEHLLIHIGPRHRCPHCSKEFVQRSNMIRHIRIHTGEKPYKCTYCDKTFSDKGACNSHVRVHTGEETCACPFCGQTFSKKQKLKYHVRKHTGEGLVSCEVCNKVFTNSYTLKEHRLTHAKTTKSSKEAVCKHCGESFDSSKFLQRHAAIAHTSGVIFGCPFCEKIFTQQARLRSHIMAHADVKHLRCLLCEDAYSERRELQKHLAQKHDVDSGSPHYLTCFRIVTPEEIGLYIPMFHEDDFSQQTNLERDKILREYFTALTSGKIRSKDNQTVKFNFKLLATKKKRRSRAKQSASSSKQDDGNNLPYNLRENPLNHDSDSNEASVINQFEDQFEDPADQVYLAHLAEPELAFSAFDNLGIESKRLKLADCNLDVSSCDLMESSSPKKFALPNSTKKREKQKRKSKALPPRKLQIAEIPSDESEDFSRLTDGPSTVGESVSEELPRIPKITVKKSMLKESKSWAIESSKLGDCLQVDGSNQNTTNVSVSFSDDEESSDEDTDDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -