Btab006422.1
Basic Information
- Insect
- Bemisia tabaci
- Gene Symbol
- ZBTB41_1
- Assembly
- GCA_903994105.1
- Location
- NW:2868339-2881078[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2e-05 0.0009 19.2 3.2 1 23 183 205 183 205 0.98 2 15 0.00029 0.013 15.5 1.5 3 23 213 233 212 233 0.99 3 15 9.7e-05 0.0044 17.0 0.2 1 23 328 350 328 350 0.98 4 15 0.017 0.75 10.0 0.2 2 23 357 379 356 379 0.96 5 15 5.5e-05 0.0025 17.8 2.2 1 23 404 426 404 426 0.97 6 15 0.00033 0.015 15.4 0.8 1 23 441 463 441 463 0.97 7 15 0.019 0.83 9.9 0.1 1 23 469 492 469 492 0.92 8 15 0.0019 0.087 12.9 3.1 2 19 500 517 500 521 0.95 9 15 0.00036 0.016 15.2 3.6 1 23 528 550 528 550 0.98 10 15 0.017 0.76 10.0 0.0 3 23 557 577 556 577 0.97 11 15 3.2e-05 0.0014 18.5 0.2 1 23 591 613 591 613 0.98 12 15 0.001 0.045 13.9 0.1 3 23 621 641 619 641 0.97 13 15 9.4e-06 0.00042 20.2 0.2 1 23 647 669 647 670 0.96 14 15 0.0029 0.13 12.4 1.9 1 23 681 703 681 703 0.96 15 15 1e-05 0.00046 20.1 0.1 2 23 1042 1063 1041 1063 0.97
Sequence Information
- Coding Sequence
- ATGGCTGAATGCCAATCTGAGCCACCATCAATATCCGTGCCGACAACTTCTTCTGATGCTGTGAACCAGAGTGCAGAAGTTATTTGCGGTGTTAATGAAGATTGCATTGTTTTAGTTAACTCTGACGGGGAAGAAACAGATTCTGCTGATTCAGGAGATCATCAAGCAGCACCAGGAGATCTAGCAAGAGCCGTAATGGAGTCTGTACCGTTCACCGATAGTCTACAGTGTCTAGCAACTATTTCCTCTCTTAGTAATGGTATTGATGTTGCCACCTCTGAAAACAAATCTCCAACCAGTGTTAAAAAGACTAAAGCCCCCTTACCCTCCATAACATTAACTGATAAAGTtacaatggaaaatattcaagattaTGTCGAAGTGCAAGAAGTTGTTGAAGAAGAAGTTATCACAGATGCATGGGCTGAGTCAGCAAACACTCAAGAACAACAAAGtATAATCGAGGAAAAAGTGGGGACTGAAGAATCAAATGATGTTGAAATTCCTCTACCTCAAGACCAGGAGCAATACGTGCAAGTGAATCCGTACCCGTGCGATTTTTGCAGTCGTCGTTTCAATAAAAAATCTCATCTCATAAATCATATGGTCACTCATCAAACGGAGCGTCCACATGGGTGTAATCTATGTGGTGCCCGTTACAGACGGAAGTGTGACCTTGTAAATCATATGAAAATACATGCGTACGCTCCGTCACGGGCTCCTACAGAAGATGAGAATAACGGGGAAATATCGCTGCCGGAGGTGGAAGATGTTGCCGACCCTTTGGCACCGACTGAAAATCTAGAAGTGAAATCAGTTGAACCAGAGTTTCCTGAAATCAGCATCATGAGTCCCCCAAAGGTCCCCAAGAGAGGTAAAAAGGCAACGTCTAAAGCAGACGTCTCGAAATTAATGAGCGCTAAGAACAGAGCGAACATGAACCAACCTCGGAAATGGCCGGTCATTGATCAAGAGAGACCCTATGTTTGCCAGCACTGTGGTATTGGATTCGCCAGAGAAAAAGCTCTTGCCTCTCATTCACGGATACACGCTGGTGACTCCCCACTGGAGTGCGATATGTGCGGTGAAATGTTCTGGGACTTGAATCTGCTGAGAGAGCATTCCCGTACAAAGCATCCTTACAATCAGGAACCAGCGCCCAAAGTAGCTGAGGATGAAGGCAACCCGGAGGTAGATGCTGCTGGTGACTTTAATTGTGAAGTTTGCGGAGTTTCATTTCATCGTTATGATATGCTGCGCAGGCATCGAAAGGTACACGCTACAAAAGTTGAAGTTGATATCTCTCAGGATGATGTGGGCCACACTTGTTCCTCATGCGGGTTATACTTTGAAAATCTTGACGAGTTGAAAATTCACATGGAGTCTCACACTCGTTTTCAACAGCATCAATGCATGACCTGCGGTGAAAGATTTGCAAGCAGCGAGGCCGTGGCAGAACATGTGCTTGAACGTCACTCTGATACAATCAATGAAAATACATGCCCTCAATGTGGGAAACAATGTAAAGATAAGAAAAGCTTACAAAAACACTCATGGGTCCATTCTGAAGGTGACGAAGGCTTTCCGTGTACTCTGTGTGAAAAGAAGTTTCACTCAAGAGCTCGCCTCAGGAGgcACATGTCCTCTCATCGTGATCGTGTTGTAGCTTGCGAAGAATGCGGAGAAGATTTTCCGGATGGTCGTGCTTTGATCTCACACAGGTCCATCCATAGCATTTTCAGTGGAGGTAGGGAGCACACAGGTCGGGTGTTTCCATGTCTTGATTGTGGGAAAACATTCGGGTCCCGATCATCACAACAAATTCATGTCAGAATCCACACCGGGGAGCGGCCATATGGTTGTCGCTATTGTTGGAAAGCCTTCGCTGATGGTGGTACTCTGAGGAAGCATGAACGCATCCATACTGGTGAAAAACCGTATGTCTGCCCTGTTTGCCCAAAAGCCTTCAACCAAAGAgttGTGTTGCGTGAACATATTCGAGCTCATCATTCAGGTGCTGAGGCAAAAGTGAACTCGTGTTACGAGTGCAAAGTTTGCGGTTATTTGTTCGGCTCATCTGTTGAACTGTGCCACCATCTTGTCCAGCATAGCGATGAAAACACAGCAAAACATCGTTTGCCTGCAGTGGGACCTCGTAAGTACAAGCGGCGACGAAAACTACTCCCAGGAGAAGGTGACGGCTTCCCCGATACctctgaatccgaatctgactCTATAATCTCCGAACGCAAGAAGCGATATGGGgaaacatcaaaaaataatcttgactCAGTCGTAAAAGCTTGTGAGAATGCTCTCGGCAGTTTGAATGCCATTGTTACTCCAGTCGaaccaaaaaaaccaaaattggaaAAGAACCCTGTAAAATCAGCAAAACTTATGAAAGGGAAGTTAGCCAAAACTGAAAAGCGCGCAAAAGCAGCTAAACTGCTAAACAATACAAGTTATGCATCTAAATATGTTGTAACTAGATCACCAGCGCCGAAAAATTTTGACGATGAAAACGAAGAGCCTAGTTTAAATGCTATGTTAAGTTTAACAGATGGGTCTTTAGATTTTGCAAGGAATAGACCGAGGACCAAAAACGTGAATTATCACAACATGAAAACTGGGTCAAAATTTGAACTGGCAACTTTTCCACTGGATCCTGGTGCCTCCACCAGTGCAACCAAGGTAGAAGTAGTCCGCAAACCTCGAGGAGGGAAAAGGAATAGCACAAGGGGTAGAGGGCGAGGCAGTCATAATATGAGCTTGGTCAACGGCAGCAGATTGGAAACCACAAATAATAGTCATGACATGTCCAACCCACTAATCCATGGTCTTAAAAACGAATATTTTGAGAAAGAGGATCCTTCCTCTGGGATCCTTGATTCAGAAACCATTGCCGAAGAAGTTGTTGCTGATGAGATAGCAACAGAAGAGTGTGTCATTGAAACCGAGGCGGTGGTTCACACGGATAACATGAACGAAATACCGTTCATCGACAATAATATTAATGAGGAGGAGAAGGTGCCTGATCCGGTAGAGTTTCATAACATTAAAACGGAAGTCTACCCGAGCAATGTCTGTGAAACTGTTTGTGAAACAGTCAGCGAATTCGTCACTTGCTCCATTTGCAATGAGGTTTTTACGGACAGAGAGTCGCTTCTGCAGCATATTCAAATTCATATATCGTAG
- Protein Sequence
- MAECQSEPPSISVPTTSSDAVNQSAEVICGVNEDCIVLVNSDGEETDSADSGDHQAAPGDLARAVMESVPFTDSLQCLATISSLSNGIDVATSENKSPTSVKKTKAPLPSITLTDKVTMENIQDYVEVQEVVEEEVITDAWAESANTQEQQSIIEEKVGTEESNDVEIPLPQDQEQYVQVNPYPCDFCSRRFNKKSHLINHMVTHQTERPHGCNLCGARYRRKCDLVNHMKIHAYAPSRAPTEDENNGEISLPEVEDVADPLAPTENLEVKSVEPEFPEISIMSPPKVPKRGKKATSKADVSKLMSAKNRANMNQPRKWPVIDQERPYVCQHCGIGFAREKALASHSRIHAGDSPLECDMCGEMFWDLNLLREHSRTKHPYNQEPAPKVAEDEGNPEVDAAGDFNCEVCGVSFHRYDMLRRHRKVHATKVEVDISQDDVGHTCSSCGLYFENLDELKIHMESHTRFQQHQCMTCGERFASSEAVAEHVLERHSDTINENTCPQCGKQCKDKKSLQKHSWVHSEGDEGFPCTLCEKKFHSRARLRRHMSSHRDRVVACEECGEDFPDGRALISHRSIHSIFSGGREHTGRVFPCLDCGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYVCPVCPKAFNQRVVLREHIRAHHSGAEAKVNSCYECKVCGYLFGSSVELCHHLVQHSDENTAKHRLPAVGPRKYKRRRKLLPGEGDGFPDTSESESDSIISERKKRYGETSKNNLDSVVKACENALGSLNAIVTPVEPKKPKLEKNPVKSAKLMKGKLAKTEKRAKAAKLLNNTSYASKYVVTRSPAPKNFDDENEEPSLNAMLSLTDGSLDFARNRPRTKNVNYHNMKTGSKFELATFPLDPGASTSATKVEVVRKPRGGKRNSTRGRGRGSHNMSLVNGSRLETTNNSHDMSNPLIHGLKNEYFEKEDPSSGILDSETIAEEVVADEIATEECVIETEAVVHTDNMNEIPFIDNNINEEEKVPDPVEFHNIKTEVYPSNVCETVCETVSEFVTCSICNEVFTDRESLLQHIQIHIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -