Basic Information

Insect: Bemisia tabaci
Gene Symbol: -
Assembly: GCA_903994105.1
Location: NW:92369-103547[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0012 0.052 13.6 1.1 1 23 281 304 281 304 0.97

2 26 0.00011 0.005 16.8 0.6 1 23 310 332 310 332 0.99

3 26 0.0017 0.075 13.1 8.3 1 23 339 361 339 362 0.96

4 26 0.00015 0.0067 16.5 0.8 1 23 367 390 367 390 0.98

5 26 0.002 0.089 12.9 0.4 1 23 424 447 424 447 0.96

6 26 3.4 1.5e+02 2.7 2.9 1 15 458 472 458 474 0.87

7 26 0.057 2.5 8.3 2.7 1 23 476 498 476 498 0.98

8 26 0.011 0.49 10.6 5.1 1 23 505 527 505 528 0.95

9 26 1.9e-05 0.00084 19.3 4.6 1 23 533 555 533 555 0.99

10 26 0.01 0.46 10.7 0.5 2 23 589 611 588 611 0.94

11 26 0.0085 0.38 10.9 6.5 1 23 617 639 617 639 0.99

12 26 3.2e-06 0.00014 21.7 4.1 1 23 646 668 646 668 0.98

13 26 2.1e-05 0.00093 19.1 0.7 1 23 674 696 674 696 0.99

14 26 0.0024 0.11 12.6 0.9 2 23 759 781 758 781 0.96

15 26 0.16 7.2 6.9 5.0 1 23 787 809 787 809 0.98

16 26 3.9e-06 0.00017 21.4 5.1 1 23 816 838 816 838 0.98

17 26 3.1e-06 0.00014 21.7 0.4 1 23 844 866 844 866 0.99

18 26 1.3e-05 0.0006 19.7 0.6 1 23 900 922 900 922 0.98

19 26 0.0011 0.049 13.7 0.2 1 23 928 951 928 951 0.97

20 26 0.17 7.6 6.8 5.4 2 23 992 1013 991 1013 0.96

21 26 0.0053 0.24 11.6 0.5 1 23 1019 1041 1019 1041 0.97

22 26 0.12 5.4 7.3 3.7 1 23 1048 1070 1048 1071 0.94

23 26 7.6e-06 0.00034 20.5 1.8 1 23 1076 1099 1076 1099 0.98

24 26 5.6e-05 0.0025 17.8 0.9 1 23 1169 1191 1169 1191 0.98

25 26 5e-06 0.00022 21.1 1.3 1 23 1197 1219 1197 1219 0.98

26 26 0.00033 0.015 15.4 0.4 2 23 1379 1400 1378 1400 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0012	0.052	13.6	1.1	1	23	281	304	281	304	0.97
2	26	0.00011	0.005	16.8	0.6	1	23	310	332	310	332	0.99
3	26	0.0017	0.075	13.1	8.3	1	23	339	361	339	362	0.96
4	26	0.00015	0.0067	16.5	0.8	1	23	367	390	367	390	0.98
5	26	0.002	0.089	12.9	0.4	1	23	424	447	424	447	0.96
6	26	3.4	1.5e+02	2.7	2.9	1	15	458	472	458	474	0.87
7	26	0.057	2.5	8.3	2.7	1	23	476	498	476	498	0.98
8	26	0.011	0.49	10.6	5.1	1	23	505	527	505	528	0.95
9	26	1.9e-05	0.00084	19.3	4.6	1	23	533	555	533	555	0.99
10	26	0.01	0.46	10.7	0.5	2	23	589	611	588	611	0.94
11	26	0.0085	0.38	10.9	6.5	1	23	617	639	617	639	0.99
12	26	3.2e-06	0.00014	21.7	4.1	1	23	646	668	646	668	0.98
13	26	2.1e-05	0.00093	19.1	0.7	1	23	674	696	674	696	0.99
14	26	0.0024	0.11	12.6	0.9	2	23	759	781	758	781	0.96
15	26	0.16	7.2	6.9	5.0	1	23	787	809	787	809	0.98
16	26	3.9e-06	0.00017	21.4	5.1	1	23	816	838	816	838	0.98
17	26	3.1e-06	0.00014	21.7	0.4	1	23	844	866	844	866	0.99
18	26	1.3e-05	0.0006	19.7	0.6	1	23	900	922	900	922	0.98
19	26	0.0011	0.049	13.7	0.2	1	23	928	951	928	951	0.97
20	26	0.17	7.6	6.8	5.4	2	23	992	1013	991	1013	0.96
21	26	0.0053	0.24	11.6	0.5	1	23	1019	1041	1019	1041	0.97
22	26	0.12	5.4	7.3	3.7	1	23	1048	1070	1048	1071	0.94
23	26	7.6e-06	0.00034	20.5	1.8	1	23	1076	1099	1076	1099	0.98
24	26	5.6e-05	0.0025	17.8	0.9	1	23	1169	1191	1169	1191	0.98
25	26	5e-06	0.00022	21.1	1.3	1	23	1197	1219	1197	1219	0.98
26	26	0.00033	0.015	15.4	0.4	2	23	1379	1400	1378	1400	0.97

Sequence Information

Coding Sequence: ATGGAGGATACTGCGACTCTAAGTCTGCACACTTACATTTGCTCACCGTCCTACACGTGTCGACCAACGTTCCCAGGAGATGAAGTCTCCGACGTGTATCGGGAAACGAGTCCACCGCGTGCTGATCCAGAGGCTGGTCATGCAGTCTTCCTGAAGCAAGAGCCTTGCCCATTAGATCAGTTCAATGAGGAATTAAGCAGTCACTCGGCAGATTCCACGCCAAGTCTCCAGGGGCACGAAGATGGTCTTTGTTTACCAGGAAATAGCTGCTCACAAGGTCAGATCCAAACAAATTTTCCTATCGCTCTAATTAGTCAAATAAAAGAGGAGGTGAACGACGAAGACAATTTATTTAATCTTTCGAACTCGAGCGATAGAATTGGAAACGAGTCGGTCGAGGCTGAGCGAATCTGTCAAGAGGCGATCTTACCAGAAGGAACCGTACTTAATTCAGATGGATTTTATCGCGTAAGCAAGGAAGAAGTCCCAGATGAAGTGGAAGAGCTTGGGCACACCGTGTCAAAAAGCTGCGTCGTGGTGCTTTGTAAACTGCCGTCTGGAGTCAAGAGAAATAGTTTCGTCGTGGAATCTGAATATGGTGTATGGGACTTCGTGGACAGAGTCGGTAACAGAATCCACCGTTTCGATTCCTTTTCGCCGGAAAGTCGGAGAGCCATACACGGCCGGGTGCGCAACCAGTTTGGCAATGTTGAAACGTTTTCAATTAATATTTGGGACCCAGCTCTGAGGAAGTATAATACATTGTTTGACAAACGACGAACCCTCCCACCCAGCAGGAATTTGGAACATAACACCGGGAAATATTGTCCTTCCTCTGCCTTTAATTGCAATCTTTGTGAGGCCACTTTCGGAAGTGGAGTTCATTTAAAAGTTCACATGCGTAGGAGGCATACTGGTAAAAGATCTTTTACTTGCAGTTATTGTCCGGCATCTTTCAGTGTAAAGGTCAATTGGCAATATCATGAGCGGACGCATAGAGAAAATAGACGGATATTTGTTTGCAAAAGGTGCAAGGTGTCATACTGCCAGGCAAGTCATTTGATGAAGCACATGTTTACTCATCACGGCGAAAAACCTTTCAAGTGCGGCCGTTGCTCAGCCACCTTTGCAGACAATGACCATCTTTTAGGACATATTAGGACGACGCACACAGAAGAGAGTCAGGTTTGTGGCAAGGAGTCGCAGGTGTCTATATCTGCGGAAGTAGATTTGACAAATCCTATGCGTACGCTCATCAGTGATGAActttttaattgcaatttttgtgcAGCTACATTCGAAAATGAACCTAATTTAAGGTCTCACATGCTCAGCAAGCATATTGGTAAGAAACCACAAAATAGACGGACATTTGTTTGCACAAGGTGTAACATGACATTCTGTAATTATGATGGTTATAAACCTTTTACTTGCAGTTATTGTCCAGCCTCTTTCTTTGAGAAGATCACCCGGGAACATCATGAGCGGACGCATAGAGAAAATAAACGGATATTTGTTTGCAAAAGGTGTAAGATGACATTCTGCCTTTCAGCTCAATTGATAAAGCACACGGTCACTCATCACAGTGAACAAAAGTTCAAGTGCAGCTACTGTTCTGCCTCCTTTGAACACAGTGGTCATCTTGAAAGACATATGACAACGCACACAGGAGAGAGGCAGGTTTGTGGCAGGGAGTCGCAGAAGTCCATATCTGCGGCGAATTTGGCGAATCCTATGCGTACGCTTAACAGTTATAAACCTTTAAATTGCAATCTTTGTGCAGCCGCATTCGAAAATGAAGCTAATTTAAGGTCTCACATGTGCGAGAGGCATCCTGGTAAACAACTTTTTACTTGCAGATATTGTCCAGCCTCTTTCAATTTGAAGCACTGTTGGAAAAAACATCTACGCACGCATAGAGAGAAGAAGCGGATATTTATTTGCAAAGAGTGTAAGATGTCATTCTGCCGTCCAGCTCATTTGGAAAAGCACATGCTTACTCATCGCGGTGGAAAACCTTACAAGTGCAACCACTGCGCAGCCTCCTTTGCAAACAATGGTCTTCTTGGAAGACATATGATGACACACACAGTAGAGAAGCAGGTTTTTGTCAGTGAGTCGCAGAACTCAGTAGTCACGGAAGCAAATTCACTGAATCACGCAAGTACGCTCAATAGTGATGAACCATTTAAAGGCAATCTTTGTGAAGCcaattttggaataaaatttaatttgaaacgcCGTGTGCGTTCGCGTACTCGTTTAAAATCTATTAAATGCACTCTTTGTGCAGCCGCATTCGAAAATGAAGCTAATTTAAGGTCCCACATGTGTAAGAGGCATCCTGGTAAACCACTTTTTACTTGCAGATATTGTCCAGCCTCCTTTAATTGGAAGCACTGTTGGAAAGAACATCTACGCACACATAGAGAGAATAAACGGATATTTATTTGCAAAGAGTGTAAGATGTCATTCTGCCGTCCAGCTCATTTGAAAAAGCACATGCTCACTCATTGCGGTGGAAAACCTTTCAAGTGCAACCATTGCGGAGCCGCCTTTGAAGACAATGGTCTTCTTGGAAGACATATGATGACACACACAGGAGAGAAGCAGGATTTTGGCAGTGATTCGCAGAACTCAGTATCCACGGCAGTAAATTCAGTGGATCGCGTAAGTGCTCCCAAGAGTGATAAACCATTTAAATGCAACGTTTGTAAAGCCAATTTCGCATCTAAATTTAATTTGGAACGTCATATGGTTGTGCATACTAATGAAATATCTTTTACATGCAATCTTTGTGGAGACGTATTCGGATCTGAACGTTATCTGAACGCTCACATGAGTAGGTGGCATACTGGTTTTAAACCGCACACAGAAGAGGAGCAGGCTTCTGGCAGTGAATCGGAGAACTCAGTATCCACGGAAGTAAGTTCAGTGAATCCTGTACGCACGCTCAACAATGATCAATGTCTTAGTTGCAAGTTTTGTGGAGCCGACTTCAAACGCAGATGTGACTTTGATACTCACATACATAAGCATACTAGAGAAAAATCTTTTGCGTGCAGTTATTGTCCAGCCTCCTTCTTCAATAATGCCAGGTTTATCAGTCATGAGCGGTCACATAGAGAAAACAGACAGTCATTTATTTGCAAATGGTGTAAGATGTCATTCCACTATTCAGCTCGTTTGGTAAAGCACACGCTCGCTCATCACAGCGAACAAAAGTTTAAGTGCAGCTACTGCTCGGCCTCTTTCGCATACAATGGTCATCTTGAAAGACATATTATGACGacgcacacagaaaaaaagcTGAGACGTGGCAGTGAGACGCAGAAGTCCTTACGCGAAGAAGAACAATCCATGAGTCACACGCGTTCGcacgatgaaaaatattttaatagcaGTGATTGTCGAAACTCGTCCAGTCGGAAGAGCGGTCTCGAAGCTCCTCTTCAGACACAATGGCAAACGGCAAACgaaacgaaatttgaaaaaagaggagTGTACGCTTGCGATTTGTGTCCGATGACATACTGCTACCCAAGTTATTTGGTGAACCACTTGCGCACCCATCTCGGTGAAAGATCTCACAAGTGTAGCCACTGCCCAGCCGCTTTCGCAAGCAGTAGTGATCTTGAAAGACATGTAATGACCCACCAAAAGGAGGAACGGGTTGCGTGCAGTAAAACCCGGGAGTCGTCGTCCGAAGTAGCACAATCGGCTAGTCATAGTGAAATGCAGGAGTCATCGTTCGAAGGAGCACAATCGACTAGTCACAGCGAAATTCGGCAATCGGCTAGTCACAGTAAAATTCGGCAATCGGCCAGTCAAAATGAAATCCGGGAGTCGTCGTTCAAAGGAGCGCAATCGGCTAGTCACAGTGAAATTCGGCAATCGGCTGGTCAAAATGAAATCCGGGAGTCGTCGTTCGAAGGAGCACAATCGGCTAGTCACAGTGAAATTCGGCAATCGGCTagtcaaaatgaaatccgaGAGTCGTCATTCGAAGGAGCACAATCGGCTAGTCACAGTGAAATTCGGCAATCGGCCAGTCAAAATGAAATCCGGGAGTCGGCGCTCGAAGGAGCACAATCGGCTAGTCGCATGCGTACGCAGAAGGATGGAAATCAACTAAAATGCCGTTACTGTCCAGCTACATTCTCGCTTCCAAAATATCTCTCAAGACATATTTTAAGTcataattttggcaaaaaaccTTTTCCTACCGGTTGCACCTCACCCTCTTCTGCGCATACGAAACAACTCTCAACGCACCCTAGCCCTCGTGAGGAACGGTTCTCTTGCGAAGGCACACCGGTGAAACCCCTTTAG
Protein Sequence: MEDTATLSLHTYICSPSYTCRPTFPGDEVSDVYRETSPPRADPEAGHAVFLKQEPCPLDQFNEELSSHSADSTPSLQGHEDGLCLPGNSCSQGQIQTNFPIALISQIKEEVNDEDNLFNLSNSSDRIGNESVEAERICQEAILPEGTVLNSDGFYRVSKEEVPDEVEELGHTVSKSCVVVLCKLPSGVKRNSFVVESEYGVWDFVDRVGNRIHRFDSFSPESRRAIHGRVRNQFGNVETFSINIWDPALRKYNTLFDKRRTLPPSRNLEHNTGKYCPSSAFNCNLCEATFGSGVHLKVHMRRRHTGKRSFTCSYCPASFSVKVNWQYHERTHRENRRIFVCKRCKVSYCQASHLMKHMFTHHGEKPFKCGRCSATFADNDHLLGHIRTTHTEESQVCGKESQVSISAEVDLTNPMRTLISDELFNCNFCAATFENEPNLRSHMLSKHIGKKPQNRRTFVCTRCNMTFCNYDGYKPFTCSYCPASFFEKITREHHERTHRENKRIFVCKRCKMTFCLSAQLIKHTVTHHSEQKFKCSYCSASFEHSGHLERHMTTHTGERQVCGRESQKSISAANLANPMRTLNSYKPLNCNLCAAAFENEANLRSHMCERHPGKQLFTCRYCPASFNLKHCWKKHLRTHREKKRIFICKECKMSFCRPAHLEKHMLTHRGGKPYKCNHCAASFANNGLLGRHMMTHTVEKQVFVSESQNSVVTEANSLNHASTLNSDEPFKGNLCEANFGIKFNLKRRVRSRTRLKSIKCTLCAAAFENEANLRSHMCKRHPGKPLFTCRYCPASFNWKHCWKEHLRTHRENKRIFICKECKMSFCRPAHLKKHMLTHCGGKPFKCNHCGAAFEDNGLLGRHMMTHTGEKQDFGSDSQNSVSTAVNSVDRVSAPKSDKPFKCNVCKANFASKFNLERHMVVHTNEISFTCNLCGDVFGSERYLNAHMSRWHTGFKPHTEEEQASGSESENSVSTEVSSVNPVRTLNNDQCLSCKFCGADFKRRCDFDTHIHKHTREKSFACSYCPASFFNNARFISHERSHRENRQSFICKWCKMSFHYSARLVKHTLAHHSEQKFKCSYCSASFAYNGHLERHIMTTHTEKKLRRGSETQKSLREEEQSMSHTRSHDEKYFNSSDCRNSSSRKSGLEAPLQTQWQTANETKFEKRGVYACDLCPMTYCYPSYLVNHLRTHLGERSHKCSHCPAAFASSSDLERHVMTHQKEERVACSKTRESSSEVAQSASHSEMQESSFEGAQSTSHSEIRQSASHSKIRQSASQNEIRESSFKGAQSASHSEIRQSAGQNEIRESSFEGAQSASHSEIRQSASQNEIRESSFEGAQSASHSEIRQSASQNEIRESALEGAQSASRMRTQKDGNQLKCRYCPATFSLPKYLSRHILSHNFGKKPFPTGCTSPSSAHTKQLSTHPSPREERFSCEGTPVKPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -