Btab004532.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bemisia tabaci
Gene Symbol
ZNF236
Assembly
GCA_903994105.1
Location
NW:1175185-1200629[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.00025 0.011 15.7 2.2 1 23 219 241 219 241 0.99
2 25 0.00085 0.038 14.1 0.6 1 23 247 269 247 269 0.95
3 25 2.8e-06 0.00013 21.9 0.3 2 23 276 297 275 297 0.97
4 25 0.033 1.5 9.1 0.1 2 23 304 325 303 325 0.96
5 25 7.8e-06 0.00035 20.5 1.8 1 23 339 361 339 361 0.98
6 25 7.1e-05 0.0032 17.5 1.2 2 23 387 408 386 408 0.98
7 25 3.3e-07 1.5e-05 24.8 0.2 1 23 414 436 414 436 0.99
8 25 0.024 1.1 9.5 4.6 1 23 442 465 442 465 0.97
9 25 0.003 0.13 12.4 0.7 1 23 475 498 475 498 0.97
10 25 7.2e-05 0.0032 17.4 2.8 3 23 575 595 573 595 0.95
11 25 1.4e-06 6.4e-05 22.8 1.6 1 23 601 623 601 623 0.99
12 25 0.00014 0.0063 16.5 1.2 1 23 628 651 628 651 0.96
13 25 1.6e-05 0.00071 19.5 4.6 1 23 750 772 750 772 0.98
14 25 0.0001 0.0045 17.0 0.3 1 23 778 800 778 800 0.98
15 25 1.3e-05 0.00059 19.8 0.6 1 23 806 828 806 828 0.95
16 25 8.1 3.6e+02 1.6 7.5 1 23 834 856 834 856 0.94
17 25 0.0032 0.14 12.3 0.2 1 23 1033 1055 1033 1055 0.98
18 25 0.13 5.8 7.2 0.0 2 21 1152 1171 1151 1172 0.92
19 25 8.9e-08 4e-06 26.6 2.3 1 23 1265 1287 1265 1287 0.98
20 25 0.011 0.49 10.6 6.5 1 23 1293 1315 1293 1315 0.99
21 25 2.9e-06 0.00013 21.8 3.3 1 23 1322 1344 1322 1344 0.98
22 25 0.00031 0.014 15.4 3.2 1 23 1350 1372 1350 1372 0.98
23 25 1.1e-06 4.9e-05 23.2 3.4 1 23 1457 1479 1457 1479 0.98
24 25 2.6e-06 0.00012 22.0 0.7 1 23 1485 1507 1485 1507 0.99
25 25 3.2e-06 0.00014 21.7 0.1 2 23 1514 1536 1513 1536 0.96

Sequence Information

Coding Sequence
ATGGAGGCCCAAACTATCGACCTAGGTTTGGGTGAGAGCCAACTATTCTCATTTTCGTCTGATCTCATCTCTGGAAACGATCTTCCAGTCATTGTTGATCTTGCTAATGTCAATACACTACCAACAGTTTCAGaGGGTAACATCTTATTGGACGAAAATGGCATTGCTTACCTCAGTATTCCAATTGCATTCGTGCAAGATACGCAACAGCCGACAGCAGACCCCCTTGCCATCGATCTCAAAAATAACTTGGCTCCTGTCGCCTCTGTTGCTGCTCCTGCACCCGTCGTTTACATTGACTCTAGTCAGCTGGCTCTTCTCAATAACCAAGAGCTGGTTTTCACCAATCCACCAGCCTCAACGATGCAAAAATCCTTGAGCTTAAACAGCCACCTGGAAATTCTGGGCGATCCTCAAGACAAACAAACTTTGATCAGCTTGCCAAGTCTTCCTGATGGAAGCGTTGATATAAGTTCAATTGATCTTTCAAGCATATGCATTAATCCCAGTGTAGCATTTAATATAGTATCACCGAAAGTGCCAGAAATCCCTGCAGAGCCAGTTACCAAAGTCGAGCCCAGTGTTAGCGCAGTCAACAAGGTTGTGGAAGTAGAAGCGCAGCAGAATTTAGAATCTGAGAAGAAAGGACCTCCATACAGGTGCAATATCTGTGACCAGGAGTTTGTGATGCTCCATGCCTTCCGGTCTCACCAACGCTCACACAGATACGAGAAGCCATTCAAATGCAAGGACTGTTCAGCATCATACAATCACGCTTCAAATTTGGTACTGCATGAGGTGATTCACACAAAGGACGCGGAGCTTCGCTGTCCCGAGTGCAAGAAGAAGTTCAACAGGCTAGCCAGTCTCAAGGCGCATATCATGGTGCATGAGAAGGAGGAATCATTGTGCTGTCCAGAATGCGGGGATGAGTTTTACAGCCAGGTCGACTATGTCGAACATCTTATGGTCCATGAAGCTGAGTGGCGTCAGccaaaaatcacagaaaaagaatactcttgtaaacaatgtaaaagaTCGTTCAACTCTGCTGGGTCTCTCCGTGATCACATGAAGAATCATTACACActgaaaagaGTAATTAGCTCCAAGAAGTACAGGCGAGGTTCCCTCAGGCCAAAAGGTTACAGTGGGAACAAGTGTGACATCTGCGAAAAGCAATTCCAAAAACCTAGTCAATTACTCAGGCACAAGAGGATACATACAGGAGAACGACCATACAAGTGCAACATATGCCCTCGAGCTTTTAGTCAAGCAGGatccttgaaaattcatatgCTCAAGCATAATGGAAAAAAACCGTACAAATGTTACTTTTGTCAAGCAACCTTTAgccaaaaagGTAATTTAAGGTGTCATGTCAAGCGATTACATGCAATCCCGCCATCAGGAACAACTGTATATGAGTGTAACAAATGTGCCTGTGTTTTTCGCAAAGTTGGCAGTCTTAATGCTCATGTCAATCGCGCTCACCGAGATTCATCAGTTCGCggtgaaaaagagaaaaagctGGAACAGTCCGAAGTTGAAGCTGCAAGTGAAGATGGTCCTTACGAACTGGTGGATCAAACTAGTGACATTAAGAAAGAAATTGATTCCAACAACACCTCTTTTGTTGAGCACACGTCAGTCTTGAATAATAACAAAATGCAAATAACCAAATTGACACTGAAGCGCTCAGGAGGCGTGAAATGGCACTTATGTATGTTTTGTCGGAAAGAATTCAAGAAGCCCTCCGACCTCATCAGACACATCCGAACACACACTcatgaaaaaccattcaaaTGCACTTTCTGTGATAAAGCATTTGCGGTTCGATCCACCCTGAGCTCTCATATGAGAACACACATCGGAAAGAGTTATTCTTGTAGCTACTGCCCTAGATCATACTCAAATCCTAGAGCCCTCAAATTACATAAATCATCTTTTCATTTGTCACCGAGTGAATGGGGTAAGGCAGCAGTGTGGCCTCCAGAATCTGCAGATTCGGGGGTTGGTGCAATCACGGTCCAATCTGAAACCATCAAATCTGAAAACGAgccaaatgaaaatattccatTAAAACTCAAGTCATCCAAAATACCTACCATCATTCATGCAAAGATTTTAGATCACAAACCAGAGAAAATTGCTGCTCCGCAAAAATTGACCTTTTTAACAGAGCTTGACTCCACAAAGCAGTCGGGACAGAAACAAGATTCCAAGACTACCGCTACACATAGACCATATGCTTGCACTGAGTGTAATCTAAGATTCAGCAAGACATCACATCTTAAAACACACATGCGGAAACACACGGGGGAGAAACCATTCCAATGTAATATTTGCAAAAAGTCATTTGTTACTGCTGGAATTTTGAGAGTTCATGCGCGATCACAcattggaataaaaaatttctcatgCAGTGATtgtggaaaattattttctacacGTGGAAGTTTGAGGCGCCATTCTGCAATCCATAGTGAAAATGACCAGTTTGCTTGTCCCCATTGTCAGAAGACTTATAAATGCATAGCTAGCTGTAAAAAGCACATTCAAACCCATCGCTTTGATAAAGAAATCCaaatagaaaagaaaggagaaTCTGCAGAAAAAGATGAACCAACAACCTATGACGATGTTGTGTATAGTTTAACTGAAGAACTAACCTCGGAAGATGTCGTGTTCAGTGGTGTTGAAGGTCAGTTTAGGCTTTTAGAAGAACCAGCTGAGAAGATAACAGAGGAAATTGTTTATGCTGAGACTAGCAAAGAAAGTGGTTGCGAAGCTCACATCAACTCCGATGAAAACAGATCCGCTGGACAAACCTTATCCCAAGAAAGCCTGCAAGAAATCGAGGACTCGTTGAATCAGCAGCTGTTTGGCGGAAATGTGAGCGCGGTTACATTAGACAAAGACCAAGGGACCTGTCAAACCATCATCAATTTCGACCGATCTTTCAACAACTGCGTCTTTTCGTCAATAGAGATTCCCAGCGATGAACTTGTCTCAGGACTCAATCAAGTTATCGTTACCTCCTCCAGTTCTGGAGTAACCAATATCCTGCctcaaaacataaaaattataaatgagtTTAGatgtgaaGTGTGTGATTCTACATTCGGAAGCAATTTAGATCTGGAGTCGCATAGATTAGTGCACACAACTCTAGACCCTGTGGTGGTAACGTCTGGAATACCCATAACATCAGTATTAGGGACCTCTGTCGATCCAGCCGCATCAATCACGACTTTTGCTCCGATACTGTCAGCAGAACCTGAACTTATGTCGTCTTCGAAGACAGTGAGAGCTAAAACTAGCAGACGCAAATCAAGGCCAGTAGGCAGACGAAAATCATACAAGTCAAAAGCACTGGGATCTTATCATGTAGATAACAGTGGTGCTGAGAATAGGGATGATCAGACGAAAGCAAGCATAAATTTCTCGATCGAGTGCCCAGTGTGTCATGAAGAATTCCCCTCAGGTGTTGCATTCCAGACGCACTTGGAAACACTCAACGATGAGCAACAttCATTGGTGACAACACATGACCTGTTAAACCTTCAAACAATCATTAATTTAGAATCAtcaacaaagaaaaaatcaagatggaAAAGAGGTGCTGCGCGAGTTTTGACGGAAGATGAGAGAAAAGAACTTGCCAAGGTTCAGCCGGAGACGGTTTCCTCTGTATCAGAAAAGGTCTTAATTTCTCTAATAGCAGAGAAAGATCGGGTCAATGACATCAAGGAGCCAGAGGAGAAGTTTGAAAAAGAGCCAATGCACCAGCACCAATGTAAATACTGTCCAAAGAGCTTCCGCAAACCGAGTGATTTAATCCGTCACTTACGAATCCACACAGGAGAACGACCGTTCCAATGTCAGATTTGCTTGAAGTGCTTCACTGTTAAATCCACGCTTGAATGCCATCTAAAAACACACAGCATTGGCAAAAAACACTTCTCGTGCCATGTTTGTGGCTATCATTTTGCGACAAAAGGCAGCTTGAAAGTTCATATGCGGTTGCACACAGgAGCTATGCCGTTCCGTTGTCCAATCTGTAGTCAACGTTTTCGAACATCTGGCCACCGCAAGACTCACTTGCTTATGCAcatgaaaaatgggaaaaaagaaGCGCTAAACCTCAATGAGAATGTTCTCAATGGTATGCAGACCATAGTAATATCAAATGACATGGAACAGGATACAGTAATTACATCCGAAATCCCTTCAGAAACTGAAGTTATCGCAGAGGATAATATTGTTTCCTCAGACACAATCATCGCAACCAAAGACTCTCTTGTTGTTCAACCTCTCTCTCTGTTAAACTCTGATGCAGACAAAAATGTCTATGTGCAAACGTTCCACACCTGTCGCGAGTGTGGCAAAAGTTTCAAGAAACTATCCCAGCTTACAAGGCATGTCCGCATTCATACTGGAGAGCGTCCGTTCAGgtgCACTGAGTGCCCAAAAGCGTTCAATCAGAAAAATGCGCTTGTCATGCACATGAAACGGCATACTGGAGAGAAACCATGGTCCTGTCCTGAGTGTGGTGCCGCTTTCGCACAGAAGGGCAATCTTCAGCAGCACATAAAGCGGAACCATAAGCACCGTCCTTTCGTGACCACACAAGACTTAACAGCCCAAACGCAAGATCTGGACAAGGTCGCAAGTAAGCCTCGTGCACGAAAAACACCTATTTCAAAGCCTGTTATGATCACGGCAAACATAACAGACAAAACCCACAATCTGCAGAAGGCTACAAGCAAGCCCCGCGCGAGATGTATCTCCACTCCAAAGCCTGTGGCAGTTATGCAGGACCTAAACGAGCAAACCCTTGATCTTGATAAGGTTATAATAACGCATGACATACAAAACGTTCCTATTTCAAAGTCTACTACGATCATACAGGACCCAATAGGCAAAACTTTCAATATGAACAAGAGTACGACTAAACCGCGCGTACGACGGATTGCTCCTTCAAAGCCTGTCACTGTTACGCAGGACCTGTCGAACCAAACCTTCAACTTAGTAGAGGAGATGTCTCAAAATATCTCCATTTCAAAGCCGTTTATAATCGCACAAGACGTGACAGAAAAGACCCAGAATCCGGTCAAGCCTGCCAGAAAGCCTCGTTCTCGACGTAACCCTCCGGTGATGCCCGTAATGGTTACGCAGATCCTGCCGGACCAAACCATTGATCTGGACAAGCACCATGAACAAGACATCTCTACTTCGAAACCTGTCACGATTACGCTTGATCTAACAGACAAAACACTCGATTTGGAAAAGGTCATGAATGATCTGTTCCCTCAAATGAAGCACGATTCTTTGAACTGA
Protein Sequence
MEAQTIDLGLGESQLFSFSSDLISGNDLPVIVDLANVNTLPTVSEGNILLDENGIAYLSIPIAFVQDTQQPTADPLAIDLKNNLAPVASVAAPAPVVYIDSSQLALLNNQELVFTNPPASTMQKSLSLNSHLEILGDPQDKQTLISLPSLPDGSVDISSIDLSSICINPSVAFNIVSPKVPEIPAEPVTKVEPSVSAVNKVVEVEAQQNLESEKKGPPYRCNICDQEFVMLHAFRSHQRSHRYEKPFKCKDCSASYNHASNLVLHEVIHTKDAELRCPECKKKFNRLASLKAHIMVHEKEESLCCPECGDEFYSQVDYVEHLMVHEAEWRQPKITEKEYSCKQCKRSFNSAGSLRDHMKNHYTLKRVISSKKYRRGSLRPKGYSGNKCDICEKQFQKPSQLLRHKRIHTGERPYKCNICPRAFSQAGSLKIHMLKHNGKKPYKCYFCQATFSQKGNLRCHVKRLHAIPPSGTTVYECNKCACVFRKVGSLNAHVNRAHRDSSVRGEKEKKLEQSEVEAASEDGPYELVDQTSDIKKEIDSNNTSFVEHTSVLNNNKMQITKLTLKRSGGVKWHLCMFCRKEFKKPSDLIRHIRTHTHEKPFKCTFCDKAFAVRSTLSSHMRTHIGKSYSCSYCPRSYSNPRALKLHKSSFHLSPSEWGKAAVWPPESADSGVGAITVQSETIKSENEPNENIPLKLKSSKIPTIIHAKILDHKPEKIAAPQKLTFLTELDSTKQSGQKQDSKTTATHRPYACTECNLRFSKTSHLKTHMRKHTGEKPFQCNICKKSFVTAGILRVHARSHIGIKNFSCSDCGKLFSTRGSLRRHSAIHSENDQFACPHCQKTYKCIASCKKHIQTHRFDKEIQIEKKGESAEKDEPTTYDDVVYSLTEELTSEDVVFSGVEGQFRLLEEPAEKITEEIVYAETSKESGCEAHINSDENRSAGQTLSQESLQEIEDSLNQQLFGGNVSAVTLDKDQGTCQTIINFDRSFNNCVFSSIEIPSDELVSGLNQVIVTSSSSGVTNILPQNIKIINEFRCEVCDSTFGSNLDLESHRLVHTTLDPVVVTSGIPITSVLGTSVDPAASITTFAPILSAEPELMSSSKTVRAKTSRRKSRPVGRRKSYKSKALGSYHVDNSGAENRDDQTKASINFSIECPVCHEEFPSGVAFQTHLETLNDEQHSLVTTHDLLNLQTIINLESSTKKKSRWKRGAARVLTEDERKELAKVQPETVSSVSEKVLISLIAEKDRVNDIKEPEEKFEKEPMHQHQCKYCPKSFRKPSDLIRHLRIHTGERPFQCQICLKCFTVKSTLECHLKTHSIGKKHFSCHVCGYHFATKGSLKVHMRLHTGAMPFRCPICSQRFRTSGHRKTHLLMHMKNGKKEALNLNENVLNGMQTIVISNDMEQDTVITSEIPSETEVIAEDNIVSSDTIIATKDSLVVQPLSLLNSDADKNVYVQTFHTCRECGKSFKKLSQLTRHVRIHTGERPFRCTECPKAFNQKNALVMHMKRHTGEKPWSCPECGAAFAQKGNLQQHIKRNHKHRPFVTTQDLTAQTQDLDKVASKPRARKTPISKPVMITANITDKTHNLQKATSKPRARCISTPKPVAVMQDLNEQTLDLDKVIITHDIQNVPISKSTTIIQDPIGKTFNMNKSTTKPRVRRIAPSKPVTVTQDLSNQTFNLVEEMSQNISISKPFIIAQDVTEKTQNPVKPARKPRSRRNPPVMPVMVTQILPDQTIDLDKHHEQDISTSKPVTITLDLTDKTLDLEKVMNDLFPQMKHDSLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-