Basic Information

Insect: Bemisia tabaci
Gene Symbol: set-17
Assembly: GCA_903994105.1
Location: NW:901143-930199[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.021 17 5.2 0.1 12 30 34 52 28 59 0.80

2 16 0.0016 1.3 8.7 0.8 18 41 318 338 308 339 0.86

3 16 0.0094 7.5 6.3 0.7 18 41 346 366 341 368 0.86

4 16 0.043 34 4.2 2.7 16 41 372 394 362 396 0.76

5 16 0.052 41 3.9 1.7 19 38 403 423 400 427 0.77

6 16 0.006 4.8 6.9 2.0 15 40 427 449 418 452 0.79

7 16 0.028 22 4.8 1.3 18 38 458 479 451 483 0.78

8 16 0.013 10 5.9 1.7 18 40 486 505 477 508 0.76

9 16 0.055 44 3.8 2.1 18 41 514 534 503 536 0.80

10 16 0.091 72 3.1 1.3 18 41 542 562 536 564 0.81

11 16 0.0021 1.7 8.4 2.4 18 41 570 590 562 591 0.84

12 16 0.007 5.5 6.7 0.2 19 38 599 619 595 620 0.74

13 16 0.00065 0.52 10.0 0.4 18 41 626 646 622 648 0.85

14 16 0.003 2.4 7.9 1.2 18 41 654 674 646 676 0.84

15 16 0.0057 4.6 7.0 0.2 18 41 682 702 677 704 0.82

16 16 0.0085 6.8 6.4 1.8 18 38 710 731 702 731 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.021	17	5.2	0.1	12	30	34	52	28	59	0.80
2	16	0.0016	1.3	8.7	0.8	18	41	318	338	308	339	0.86
3	16	0.0094	7.5	6.3	0.7	18	41	346	366	341	368	0.86
4	16	0.043	34	4.2	2.7	16	41	372	394	362	396	0.76
5	16	0.052	41	3.9	1.7	19	38	403	423	400	427	0.77
6	16	0.006	4.8	6.9	2.0	15	40	427	449	418	452	0.79
7	16	0.028	22	4.8	1.3	18	38	458	479	451	483	0.78
8	16	0.013	10	5.9	1.7	18	40	486	505	477	508	0.76
9	16	0.055	44	3.8	2.1	18	41	514	534	503	536	0.80
10	16	0.091	72	3.1	1.3	18	41	542	562	536	564	0.81
11	16	0.0021	1.7	8.4	2.4	18	41	570	590	562	591	0.84
12	16	0.007	5.5	6.7	0.2	19	38	599	619	595	620	0.74
13	16	0.00065	0.52	10.0	0.4	18	41	626	646	622	648	0.85
14	16	0.003	2.4	7.9	1.2	18	41	654	674	646	676	0.84
15	16	0.0057	4.6	7.0	0.2	18	41	682	702	677	704	0.82
16	16	0.0085	6.8	6.4	1.8	18	38	710	731	702	731	0.76

Sequence Information

Coding Sequence: ATGACCGAATCAAGTAGTGTGTTGACAGGTGAAAGTAGTGGTGGAAGATACCCAAGACGTGCCCTTCCGcataaaaattacaaagaacCCTCTGTTCCTGATGAGGACACTTTGATCTATTGCAATTCATGCCACGACACTTTTGAAggaggttgcaaaattcacaAGCTGCTTTATGTAAAGGATACACCTGTTCCGATCGACAAGGATGATAAGCTACGCGCTCTAAAAACTGTGCCGGAGGGTTTGATGGTCGGCGTCTCGTCAATTCCAGGAGCAGGAGACGGTGTCTGGACTATTAAGACCATCAAGAAGGATACCCTGTTTGGCCCTTACGAAGGTGTTTATAAGAGGAAATCTGACAATATTTTAACCAATTATAGTTGGGAGataaaaaaggaaaggaagccAATCAGCTTTGTGGATGCACAAGATATAGCGACCAGTAACTGGATGCGATTTGTCAACTGTGCCAGGAGCACCTACGAACAGAATCTTGTTGCACACCAGTACAAAGGCAAAATTTACTACCGAGCATTTGATGACATACCCTCTAACAGAGAATTATTCGTCTACTATGGAAGTAAATTCGCTGAAGAGCAGCTAGGaatcaaaaatttccaagaatatAAGGATCTACCACAGTCGGTTTTCCTATGCCCACACTGCGCTTTGGGATATTCTTCCCTGCTGCCTCTAAATAACCACAGTAGAGTCTGCCGGATGCGATATCTatcagaggaggaaaaagaaaagctaCAGCAGAAAAAACTACCTCAGTCACCAACCCAGAATCTATGTTCGTTCGGCGTGTGCGTTGTCTGCAATTCGAGAGTCTTACCTTCCGGCACAGCTCAGAAGACGAGCAAGAAATGCGACAACTGCGTGTTCAAGGATGAGGAGAGTGTCCTACTCCCCATGAAGAAAATAAGTGACAAGAATAGACCGTTCTCTTGCACTTATTGTGATAAGACATTCACCCAATCCAGTCATTTGGATAGGCATTTAAGGACGCATACGGGCGACAAACCATTCTCTTGTACTTATTGTGATAAGAAATTCACCGAATCCAGTATTCTAAATAATCATCTAAGGACGCACACGGGCGAAAAGCCATTCTCGTGCACTTattgtgataaaaaattcaCCGCATCTGGTCATTTAGATAGGCATTTAAGGACGCACACAGGCGACAGGCCATTCTCTTGTACTTATTGTGATAAGAAATTCACCGAATCTGGTCATTTAAATAAGCATTTAAGGACGCACACGGGCGAAAAGCCGTTCTCTTGTTTTTATTGTGGTAAGAAATTCACCCAATCCAGTGATTTAAATAAGCATCTGAGGATGCACACGGGTGAAAAGCCGTTCTCGTGCACTTattgtgataaaaaattcaCCGCATCTGGTCATTTAGATACGCACTTAAGGACGCACACGGGCGAAAAGCCGTTCTCTTGTACTTATTGTGATAAGAAATTCACCCGATCCAATCTTTTGAATGAGCATATAAGGACGCACACGGGCGACAAACCATTCTCTTGTTTTTATTGTGATAAGAAATTCACCCAATCCGGTCATTTAAATAGGCATCTAAGGACGCACACAGGCGACCAGCCATTCTCGTGCACTCATTGTGATGAGAAATTCACCCAATCCGGTCATTTAAATAGGCATTTAAGGACGCACACGGGCGACAAGCCGTTCTCGTGCACTTATTGTAATAAGAAATTCACCCAATCCGGTACTTTAAATAGGCATCTAAGGACGCACACGGGCGGCAAACCATTCTCGTGTACTTATTGTGACAAGAAATTCACCAAATCCGGTGATTTAAGTAAGCATCTAAGGACGCACGCGGGCGACAAACCATTCTCGTGTACTTATTGTGACAAGAAATTCACCCGATCCGGTGATTTAAGTAGGCATCTGAGGACGCACACGGGCGAAAAGCCATTCTCGTGCACTTATTGTGATAAGAAATTCACCCAATCCGGTACTTTAAATAGGCATCTAAGGACGCACACGGGCGACAAACCATTCTCGTGCACTTATTGTGACAAGAAATTCACCCAATCCGGTGATTTAAGTAGGCATCTAAAGACGCACACGGGCGAAAAGCCGTTCTCTTGTACTTATTGTGATAAGAAATTCACCCGATCTGGTCATTTAGATACGCATTTAAGGACGCACTCCAACGACTGA
Protein Sequence: MTESSSVLTGESSGGRYPRRALPHKNYKEPSVPDEDTLIYCNSCHDTFEGGCKIHKLLYVKDTPVPIDKDDKLRALKTVPEGLMVGVSSIPGAGDGVWTIKTIKKDTLFGPYEGVYKRKSDNILTNYSWEIKKERKPISFVDAQDIATSNWMRFVNCARSTYEQNLVAHQYKGKIYYRAFDDIPSNRELFVYYGSKFAEEQLGIKNFQEYKDLPQSVFLCPHCALGYSSLLPLNNHSRVCRMRYLSEEEKEKLQQKKLPQSPTQNLCSFGVCVVCNSRVLPSGTAQKTSKKCDNCVFKDEESVLLPMKKISDKNRPFSCTYCDKTFTQSSHLDRHLRTHTGDKPFSCTYCDKKFTESSILNNHLRTHTGEKPFSCTYCDKKFTASGHLDRHLRTHTGDRPFSCTYCDKKFTESGHLNKHLRTHTGEKPFSCFYCGKKFTQSSDLNKHLRMHTGEKPFSCTYCDKKFTASGHLDTHLRTHTGEKPFSCTYCDKKFTRSNLLNEHIRTHTGDKPFSCFYCDKKFTQSGHLNRHLRTHTGDQPFSCTHCDEKFTQSGHLNRHLRTHTGDKPFSCTYCNKKFTQSGTLNRHLRTHTGGKPFSCTYCDKKFTKSGDLSKHLRTHAGDKPFSCTYCDKKFTRSGDLSRHLRTHTGEKPFSCTYCDKKFTQSGTLNRHLRTHTGDKPFSCTYCDKKFTQSGDLSRHLKTHTGEKPFSCTYCDKKFTRSGHLDTHLRTHSND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00201868;
90% Identity: iTF_00201868;
80% Identity: iTF_00201868;