Btab008527.1
Basic Information
- Insect
- Bemisia tabaci
- Gene Symbol
- bab1
- Assembly
- GCA_903994105.1
- Location
- NW:502452-556636[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-15 7.7e-12 44.4 0.0 2 44 377 419 376 420 0.91
Sequence Information
- Coding Sequence
- ATGGCGGCGCTGCAGCAGTATTGTCTGCGCTGGAACAATCACAGGTCGAACCTGTTGACGGTTTTCGATCAGCTCCTTCAGAACGAGGCGTTTACCGACGTGACGTTGGCCTGcgaaggtggactctcagtgAAATGTCATAAAATGGTGCTGGCCGCTTGCTCGTCCTACTTCCAGAACGTCTTCACCGAGCTCCCTTGCAGGCACCCCGTCGTCGTGCTCAAGGATGTCCGTTACTGCGAAATCAAGGCCATCCTCCAGTATATGTACCGCGGAGAGGTCAATGTTCAGCAAGATCAGCTCGCCGCTTTGCTCAAGGTCGCCGAGGCTCTCAAGGTTAAAGGACTCGTCGAGGAAAATAGCCAGGTGACGAAATCAGACGAAGACCCGAACACGATCACGACCTCCTCGAACGCGAACCAGACGACCCCTCACTCCTCGAGCAGCCGGAACTCCACAAGCAACGGAAACCCCAACTCAACGCTCAACTCCAACTCCAACTCCAACAACTCGCCGCCGCACTCGACGAGCGTGCCGGCCCAGTCCAAGTCGCCGTTCATGTACGGGGGCGGAGGCGGTCACGGGGGCAAGTCGCCCCTGGAGCGGCCTGGCTCCCGCGGGGGTCTCCCGGTCTGGGCGGTCCCGCACGGGTTCCCGCTGCCCTCGACGCCGAACCCGCACGCGGCCGCCATGCTCTCCTCCTGCTACGAGGCGGCCATGGGCGCGGACATCCCGCCGCTGCGACGCAAGAAGATGTCGGGGATGATGATGTCCCGCGACACGCCGATCCTCCGCACGGTGCTCGGACAGGGGCAGGCCGACTCGAGCCAGCCGGTCTCCCTCATCTGCCACCCCGACAGCCACGACTCCCAGAACCACGCCAGCAGCCCCGCTCAGGATCCGGACAAAAGTAATTTATCGGTTAAAGCTGAATTTTCGTCAGAAGGTGCTCCCTCTCCGTACACAGACGTCACAGACGAGGAAATGAACGACCGGgCAAGAATGATGTTGCACTCATCCTCACCTAAATCGTTCTATGCGGACTCGAAAGgCGGCTCTGTATCCTCAGCCATTGCCACGTACGTGCCTACCCAGAAACCAGAGTGGAAGCGGTATAAACAGTACACACGACACGACATCGACTCGGCAATCGAAGCAGTGCAAAACGGTATGAGTGCTCTGCAAGCCTCTCGGAAATTTGGAGTGCCATCACGGACGTTATACGACAAAGTGAAAAAGCGTGGAATCGTGACGAGCCGGCCTTTCCGACGGAGCTCAAGTGGGAATAATGGTGCAGCGTTTCCTTACGGTATTAGTGGTGCAAGTTTAATGTTAGCAGGTAATGAGCAGAATCACATGAGCATGGAGCGGATGTACCTGCACCATGCGGATGTCGGGGACAGCAGATCCGCAGATAACGACAGAGAAGCTGTGGCAATAGCCGCAGCTGCAGGTGCATCAATCAATTCAGATCGCAACTCAACGACGCCTCCCAACAGTCATCCTTCGCCACGATCTCCTTCGCCGAATTTAATCAAGTATGCAAATAGGAATAGTATGACTCCATCTCCGCCTCCGATGCAAGAGGGCGAGGATGAAGAAGACCAGGTGGAGGATTTGTCGATATCGCGGAAGCCAGACCCGCCTCCAACGTCTAGAGTCATCATGCCACCAATGAGCCAAGCCACCGCAACCATGCTGGCTGCAGGAAGCGACAGCATGCCATCCGATGGTGTCAGAGATTGA
- Protein Sequence
- MAALQQYCLRWNNHRSNLLTVFDQLLQNEAFTDVTLACEGGLSVKCHKMVLAACSSYFQNVFTELPCRHPVVVLKDVRYCEIKAILQYMYRGEVNVQQDQLAALLKVAEALKVKGLVEENSQVTKSDEDPNTITTSSNANQTTPHSSSSRNSTSNGNPNSTLNSNSNSNNSPPHSTSVPAQSKSPFMYGGGGGHGGKSPLERPGSRGGLPVWAVPHGFPLPSTPNPHAAAMLSSCYEAAMGADIPPLRRKKMSGMMMSRDTPILRTVLGQGQADSSQPVSLICHPDSHDSQNHASSPAQDPDKSNLSVKAEFSSEGAPSPYTDVTDEEMNDRARMMLHSSSPKSFYADSKGGSVSSAIATYVPTQKPEWKRYKQYTRHDIDSAIEAVQNGMSALQASRKFGVPSRTLYDKVKKRGIVTSRPFRRSSSGNNGAAFPYGISGASLMLAGNEQNHMSMERMYLHHADVGDSRSADNDREAVAIAAAAGASINSDRNSTTPPNSHPSPRSPSPNLIKYANRNSMTPSPPPMQEGEDEEDQVEDLSISRKPDPPPTSRVIMPPMSQATATMLAAGSDSMPSDGVRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00201793;
- 90% Identity
- iTF_00201793;
- 80% Identity
- iTF_00201793;