Btab004010.1
Basic Information
- Insect
- Bemisia tabaci
- Gene Symbol
- bab1
- Assembly
- GCA_903994105.1
- Location
- NW:460107-732270[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-15 3.6e-12 45.4 0.0 3 43 331 372 329 374 0.94
Sequence Information
- Coding Sequence
- ATGTCCACAGGATCCATGGTAATGCACCCCAACGACGGAACCAACAACCCCGGCCCGGGGGGCGGAGGAGGGGGTGGCCCCACAACCCTGGAGACCCCCGCGGAGGGCGCCACCAGCGCCGAGTCTCCGCAACAACGATTCTGCCTCCGCTGGAACAACCACCAAACCAACCTGATCAACGTCTTCGACCAACTCTTGCAGAACGGGTGGTTCGTCGACGTCACCCTGGCTTGCGATGGCCGGTCCGTACAAGCGCACAAGGTCGTCCTTTCGGCTTGCAGCCCCTACTTCCAAGCCCTCTTCACGGACAACCCTTGTCAACACCCCATCGTTATCCTCAAAGACATCTCGTACTCGGATCTGAAATCCGTCGTCGAGTTCATGTACAAAGGCGAGATCAACGTGGCGCAAGAACAGATCGGGCCTTTGCTCCGCGTGGCCGAGACGCTGAAGATCCGCGGTCTGGCCGAGATCAACAACGAACCGGAGTTGAAGTCCTCGACGACGGACGTGCGAGCCGGCACCCCCGGGTCCCAGCCCcggaaaaggaggaggaggtcCGTGGAAAGGAGTCCGGAGAACCACGCGGACAAGAGAGCGTGCCCGCCGTCCCCCGGCCAAGGGAGCGGGAGTGCAGGACAGGCGCCGCCGGGACATCCGGGTATGGCACCCGGCGCAGTGGACAGACAGCCCCCGGCCCAGGGCCCCCCGCAACAGTCGCAGCAACAGGGAACTCCGGGTCAGCGCGACGTCATCGATGATTTGGATATTAAGCCCGGCATTGCCGAGATGATACGCGAGGAGGAAAGGGCGAAAAAGCTCGAATCGTCGCAAGCTTGGCTCTGCGCCTCCACATCCTCCGGACCAGTGGCAGAAACTTCTTACCAGGAGCAGTTGCAGTCGTGGTGGCAGAGCAGCTTCCGCTCGAACCAATTCGTGATGAACAACCTCCGGTTCCGAGAGCGCGGGCCGCTGAAGACGTGGCGCTCGGAGACGATGGCCGAGGCGATCATGTCCGTGCTCAACCAGGGGCTCTCCCTCTCGCAGGCCGCCCGCAAGTTCGACATTCCCTACCCGACCTTCGTCCTCTACGCCAACCGCGTCCACAACATGCTTGGACCCTCCGCCGACGGCAGCGCAGATCTTAGACCGAAAGGGCGTGGAAGACCGCAAAGAATATTACTGGGATACTGGCCGGAAAAACACATTCAGAAAGTTATTGCAGCCGTCGTGTTCAAGGACCCGCAACTCATGAGGGACGAACCGACCACACAGTCTTACAATAGGTATCCGGAGCCGCTCTCGCTGTACAGTGGATGCATGAACGGACCCGAAGCGCCAGTCTCGCCGAGCTCGCACGCCTCGAGCATCCTGGCGGCAGTTCACAGTGCAAACCAAATAAGACAGCAGATGTACAACGCAGCTCCGGCCGCCTCCAACGTTCTTCCGGCCCTGGCCAACGGAACCCCCAGTCAGAGCCCTGTCAACAGCTCCTCCTCTTCGCCCGTTTCCAATAATAATCTAGAGGTTGGACTTGGAGTGACCGGCGTGAATTACGAACCAACGGATTTCTCCACCCCTAGATCAGAACCAATTTTCCAGGAGGAACTGGACGATATAGTCTCAAGGAGTACTCCTACCTCGGACTCGAATCGGGATCAGCCTCTTCCACTAGTCATAGATCAGAGAAGTGAATGA
- Protein Sequence
- MSTGSMVMHPNDGTNNPGPGGGGGGGPTTLETPAEGATSAESPQQRFCLRWNNHQTNLINVFDQLLQNGWFVDVTLACDGRSVQAHKVVLSACSPYFQALFTDNPCQHPIVILKDISYSDLKSVVEFMYKGEINVAQEQIGPLLRVAETLKIRGLAEINNEPELKSSTTDVRAGTPGSQPRKRRRRSVERSPENHADKRACPPSPGQGSGSAGQAPPGHPGMAPGAVDRQPPAQGPPQQSQQQGTPGQRDVIDDLDIKPGIAEMIREEERAKKLESSQAWLCASTSSGPVAETSYQEQLQSWWQSSFRSNQFVMNNLRFRERGPLKTWRSETMAEAIMSVLNQGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSADGSADLRPKGRGRPQRILLGYWPEKHIQKVIAAVVFKDPQLMRDEPTTQSYNRYPEPLSLYSGCMNGPEAPVSPSSHASSILAAVHSANQIRQQMYNAAPAASNVLPALANGTPSQSPVNSSSSSPVSNNNLEVGLGVTGVNYEPTDFSTPRSEPIFQEELDDIVSRSTPTSDSNRDQPLPLVIDQRSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00201779;
- 90% Identity
- iTF_00201779;
- 80% Identity
- iTF_00201779;