Btab000463.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bemisia tabaci
Gene Symbol
Mblk-1
Assembly
GCA_903994105.1
Location
NW:373856-519295[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.8e-18 3.8e-15 54.9 0.1 1 43 273 316 273 318 0.95
2 2 9.8e-19 1.3e-15 56.4 0.0 1 43 714 757 714 759 0.95

Sequence Information

Coding Sequence
ATGGGGAGGAGGAAATGGCAGCACTATCACTCGAGCCTGCTGCCCGAATACAGTGCCCAGCTTCAGATGGAGGAACAGAAGGACTGGTCCCCGGTCGCTGCTGACAAGTGCGTCCTATGCCCCACTGACAAACCCAGCCCCACCGATATCACCAACCTCCAGCGGCCGAAATCCGAGTCGGGCTCCCTCTCGAGCGGTCACAGCGAGGACTCCGACCGGGACTCGCCCCTGGGGCCGCCCACCCCGACGCCGACGCCCACCTCCGGCTCGACGCCCGTTCCCCCGACGGGCGCCCACTCTCGCTCCCCCGCCATGACGACCTTCGAGTCGGGCCTCAACGCCTCCATGATGGCCGCCTCCCTGGCCGCAGTGGCCGCCTTCTCCACCTCGAACCCGGGCGCCAAGCCGGGCCTCTACCCCGGCGGCCACGCCCTCTTCCCGCCCTGGTACCTCCCCCCGACCGCGGCCGCCGCCTCCGCCAACCTCGCCGAGGCCCTCCGGCTGGAGGCCAAGGAGTCCGCCGAGCCCCGCGCCCCCTCCACGCCCACGCCCACCGGGACGCCCTCCGGGACGCCCACCGGGGCCGCCCCAGGCAACGCCGAGATGCCCCTCGACCTCAGCGCCAAGTCCTCGTCCCTCAACTCCCCCTCGGAGACCAAGTCCAGCTCCCCGGACGCCCACGACATTCCCTCCCTCCAGCACCTCATCCAGTCGGCCGCCTCGCCGCAGTCTCCGCGCGTGCCTCTCCTCACCAGTCACCAACAAATCTTTAAGGCTAAACCCCGGCTCAGTGCCGTGGCGGGACGACGGACCTACACGGAGGAGGAGCTCCAGGCGGCGCTGCAGGACATCCAGAGCGGGAAACTCGGCACCCGGCGGGCGGCCGTCATCTACGGCATCCCGCGCTCCACCCTCCGCAACAAGGTCTACAAGCTGACGATGGAGCGGCGGCAGGACTCGCACATCGGCATCACCTCCAACAGCAACCTGGCCGGGAACCTGgccgacgacgacgacggcATCCGGGACGACGACGACGCCATGCGGGACGACGACGCCGAGCTCTCCGGCGCCGAGGAAGAGAGGGAAGTAGAGAAAACCTTACTAAAACCCCTGATTTCAGTCGAGGATCTAATCCGGCTCTCCCAGGAGGGGCCGGCACCCACCGACTCCCTGCGGACGCTCCTCCAGCAGGGCAGCAAGCTGGACCGACCCAAGAGGGAGGAGTCCGCCCACTCGCCGCCCGTCTACCCGTACTTCCCCCCTAACCTAGAACAATTGTGGAGCGGGCTGGATCAGTCCGCGCTGGCACCGTACCTGGCTCAGATCCTCGCCGCGGGTGGCAACAACCTCAACGCAGCGCTCCTAGGGCAGATCAGTCCCTTCCTGGCGGCCAACGCCAGGCAGAGGCATCCACCGGTGCCGGAAGAACGCCCGGCGTCCGCATCTCCTGCCCCTGACTTCGTACCTAAGTTTCCTCCCCAGGCGCATCTCTCCGACCTGGTCAGACGCATGATGGCCGAGGAGAAGATGCTCCTCGAGGAACAGCAGAAGAAGGACCCACGATCTTTCCAGATCAACGGATCCAGGACCTCGGAGCCTCGGGCGTCCTCGTCAGGGCTCCCGAGCAGCAAAGACGACGAGAACTCGGCGTCGAACGTTATACTGAAAATTCCGTCCTTCAAGCCCGCTTCCAAGAACGGCCTGGAAAGCTCCTTCCAGTCGCCGGACTTCCCCCTAGGTGTCAAAGTCAGCTCCGCCGACTCCATGGTCTCGGTGGTGTCGCCGCCTATCGGCGGCGCCCGGAGCGAGTCCTCCTCCCCGCCCTCCATGGTCGGCAGGAACTTCAGTATGAACTTCAAGGAGGTGATAGCGAAAAGTATTAGTCAGAAATTCCAGCAGCCACCAAACGAACATATCCCCAGTCCCTCCGGGCTCAACTTCCGAGCGGGGCTGTTCAACCCCGGGCTGGGGAACCCGCCCATCATCCGGAACCACAACAACAACCACGTGGAGGACCGGAAACTCTTAGCGCCTTCGAATAAAGGCCTAGGGATGCCGGGTAGTGCCCCTACGTCGTCGGGTTCCTCGTCGGGCGGAAAGGGCACGCGGCCGAAGAGAGGGAAGTATCGGAACTACGATCGGGACAGCTTGGTGGAAGCCGTCAGGGCCGTCCAAAGGGGCGAGATGAGTGTTCACAGGGCCGGGTCCTACTACGGCGTGCCCCATTCAACCCTCGAGTACAAAGTCAAAGAAAGACACTTGATGAGGCCGCGCAAGCGCGAGCCGAAGCCGCAGCCCGCGGAGGACGCCAAGAGGAAAGACGATAACATCCTTCGGATATCCCCCAGTGATAAACCCAAGCCTTTGCCCCCGAAACCAAAAACCCCCTTCTCGACGTCCTCGCCGCTGCCGGGGACCCCGAACGGTCTGAAGATCCCGCCCCTGTTCGATCCCTCCATGGCCTACCCGGCGGGGCCGCCCTTCCCGTTCTGGCCGCCCAACCCCTTCGCCCACCTCCCGCTGGACTACGGCCGCGGCGGCAACTTCCCCCAGAGCCCGGAGCAGTTCTTCGCCACCCAGATGATGCAGAGGATACAGCAGGAGGAGAACAACAGGACGTCCCAAGGGAGCCCGACGCCGGCCGCCATCGCGGCTCTGGGCAAGAGTGCACGGGAGGTCGCGGAAAGCCTCTATGACGGGACTGGGGCTAATGGTAGTTTTCTAGACGGGATAATCCGGTCCAGTTTAGAGACTGGGTTGAAGGACGGCGGGCATAGTTCGCCGGAACACTTATCGAATAGGAACCTTTTAGAACAACTTTGCCGAACAAATAGTCGACTATCCTCTTTGACCAGGCCGCCGCCTCGAGACACGGGGAGCGGCGGCAGTGGTAGTGGGAGTGGCTCCGGTTCGGACGAAGATACCGTCAGGAGGCCTTCGACAAGCGCCGTGAACCCGGCAACGTCGCCATCTCTAGATAGACAAAAGGCTCTGGATAGAGAAATTAAGTCTGAGAAGTTTAGCGAAGAAGACATAGTATCACAAGAAGACGTCCGGTCGCCGCCGACTAGTACGGACCTGTTAGATAGCTCGCAAATAAAAGTTGAAACTAATGAAAGTGCCTGTGATAATAAAAGTAGAGAGGAAGACTCCGCACCCGCCAAAGACCAAGAAGCAGATCAAGAACCCTTAGAGACTATGGAAACTTAA
Protein Sequence
MGRRKWQHYHSSLLPEYSAQLQMEEQKDWSPVAADKCVLCPTDKPSPTDITNLQRPKSESGSLSSGHSEDSDRDSPLGPPTPTPTPTSGSTPVPPTGAHSRSPAMTTFESGLNASMMAASLAAVAAFSTSNPGAKPGLYPGGHALFPPWYLPPTAAAASANLAEALRLEAKESAEPRAPSTPTPTGTPSGTPTGAAPGNAEMPLDLSAKSSSLNSPSETKSSSPDAHDIPSLQHLIQSAASPQSPRVPLLTSHQQIFKAKPRLSAVAGRRTYTEEELQAALQDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLTMERRQDSHIGITSNSNLAGNLADDDDGIRDDDDAMRDDDAELSGAEEEREVEKTLLKPLISVEDLIRLSQEGPAPTDSLRTLLQQGSKLDRPKREESAHSPPVYPYFPPNLEQLWSGLDQSALAPYLAQILAAGGNNLNAALLGQISPFLAANARQRHPPVPEERPASASPAPDFVPKFPPQAHLSDLVRRMMAEEKMLLEEQQKKDPRSFQINGSRTSEPRASSSGLPSSKDDENSASNVILKIPSFKPASKNGLESSFQSPDFPLGVKVSSADSMVSVVSPPIGGARSESSSPPSMVGRNFSMNFKEVIAKSISQKFQQPPNEHIPSPSGLNFRAGLFNPGLGNPPIIRNHNNNHVEDRKLLAPSNKGLGMPGSAPTSSGSSSGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPAEDAKRKDDNILRISPSDKPKPLPPKPKTPFSTSSPLPGTPNGLKIPPLFDPSMAYPAGPPFPFWPPNPFAHLPLDYGRGGNFPQSPEQFFATQMMQRIQQEENNRTSQGSPTPAAIAALGKSAREVAESLYDGTGANGSFLDGIIRSSLETGLKDGGHSSPEHLSNRNLLEQLCRTNSRLSSLTRPPPRDTGSGGSGSGSGSGSDEDTVRRPSTSAVNPATSPSLDRQKALDREIKSEKFSEEDIVSQEDVRSPPTSTDLLDSSQIKVETNESACDNKSREEDSAPAKDQEADQEPLETMET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-