Btab008195.1
Basic Information
- Insect
- Bemisia tabaci
- Gene Symbol
- bab2
- Assembly
- GCA_903994105.1
- Location
- NW:441050-476762[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-12 2.6e-09 36.3 0.0 1 38 543 581 543 586 0.90 2 4 3.4e-13 4.6e-10 38.7 0.1 2 39 598 635 597 638 0.94 3 4 1.7e-18 2.3e-15 55.6 0.0 2 45 653 697 652 697 0.97 4 4 9.2e-20 1.2e-16 59.7 0.1 1 43 704 747 704 748 0.97
Sequence Information
- Coding Sequence
- ATGTCTGGCTACTATAATGAGTCTGATAATGTGATAGAGAATAGTGGGGAGGATTGGTCCTCCGCCGCAGACTCTAATATGGCAAGTCAGCATTATTGTCTCCGGTGGAACAACTACCAATCCAATATGACCTCTGTATTCCATCATCTGCTCAGGACTGAAGCTTTTGTCGATGTAACGCTGGCTTGCAATGAAAATTCTCTCAAAGCACACAAGGTTGTTTTGTCAGCATGTTCAtcgtactttcaaaaattattaatcgAAAACCCATGCAAGCATCCTACCATTATTATGCCTCAAGATGTGTGTTTCAATGACCTCAAGTTTATCATAGAGTTTGTATATCGTGGTGAAATTGACGTTTCTCAAGCAGAATTACAATCGCTGCTGAAGACAGCCGACCAATTAAAAATCAAAGGATTGTGTGAAGTGCCTGAGCGTAGTAGCAAGGAAGGAACCCCCACAGCTGAAGTCACGCCTCTTCCGCCCGTGCAACAAAGCACCTCACCTATCAGAGGAAGGACTAAAATGCAAAGGAGGATGTCTGGCACAAAGAGGAGATTCAATGAACAGTATCCCAATAACATCAACAAGAGGACTTTTTACGGCAGGGAAAACAAGCCGCAACAAGTCCAGAGTCATCAGAGTCAAATTATTCAAACCTCGGTTACGGCAGATATGTTGGAGTCTAACACTGGCCATGATAACCAGGTTTGTTTCAGCAACCTACTCAAGTTACCACCCATGACCAATTGTATGACTGTAGCCACAtcaactgaagaagaaaatgattgCAAAAGCAACATTGAGCTGAACGTTCTGAATTTAGACCAACAGCCTCAATCTCAACAACCACCACAACCCGTGCTTCACGAAAATGGACATGGTACGCCGCATGCTACACCTCACGGAACTCCACATGGGACTCCACATGGAACACCGCATGGGACACCACATGGAACACCTCATGGAACGCCCCATGGCACTCCCCATTCACAGCATGAAAGTAGATTAGTTATGACGAGTCCTGCGCCAATCATGTCCACTACGCACACGCCTCCCACCAATATGCAACCTCATACGCTTCAACCAATGACCAACTGTATGACGGTGGCTACATCAACAGACGAAGAAAATGACTGCAAGTCAAATATAGAGCTATCAGTTTTGTCGTTGGATAACCCTCAGCAAGGCCCCCAGCCACAACAACCACAACCTCAACAAGCGCAAGGAGTGCAACACGATTCAACATCTTTGATGTCTCTGGATGGGCAGGGGCCACAATCGCAGCAGCCAACGCCTCAACCAGTGCCGCACGATGATCAGAACCACAATCATGGTCATGGGCACTCAACACCTCAGCCTCAACCACAACTCCACTCGCAAGAAAACAGGGTGGTGATGACCAGCCCTGCTCTCATCATGTCAACCACACTTACCCCTCTGACAACCATCCAACCAACATTTTCTGTGTTGCAGAATCCTCCAGGGGGAGAGGACGAGCATACAATGCATACGATGATGATCACCCCGGAACTGTTAGGCCTTATACCATCCTCCTCTGATGTTAGCAATGATAGCAAATCGGGCATAGTAACATCTGGTACTATCTGTAATAAAGCGTGGACCCAAGAAGATATGGATATGGCCCTAGAAGCGCTACGCAATCATAACATGAGCCTAACTAAAGCATCAATCACCTATGGCATACCTTCAACAACGCTGTGGCAAAGAGCTCATAGAATGGGCATTGACACACCGAAGAAAGATGGACCTAATAAGTCATGGAATGAGGATATTTTAAACGTTGCGCTAGAAGCTCTCAGGAATGGTTCAATATCTGCCAATAAAGCCAGCAAAGCATATGgtATCCCCAGTAGCACCTTGTATAAAATAGCAAGGCGTGAGGGCATCAGGCTAGCTCAACCGTTCAATGCAGCACCAACAACTTGGAATCCTGATGACCTTGAACGAGCGTTGGATGCCATTAGGTCTGGACAAACAACGGTGCAGAGGGCTGCTACTGAGTATGGAATTCCTTCTGGTACATTATATGGAAGGTGTAAGCGAGAAGGTATTGAACTGTCACGTAGCAATCCAACACCATGGTCTGAAGACGCCATGTTGGAAGCTTTAGAAGCTGTGAGAATGGGTCAAATGAGTATCAACCAAGCTGCAATTCACTACAACCTCCCTTATTCTTCTTTGTATGGAAGGTTTAAACGTGGGAAGTATGAAGCCGACCATCCGGATCAAATCAACGTCGACTCATCGTCACCTCCTGCCCAACAGCAGCAGACCCTCTCACCAATGTATTTCGTGTAA
- Protein Sequence
- MSGYYNESDNVIENSGEDWSSAADSNMASQHYCLRWNNYQSNMTSVFHHLLRTEAFVDVTLACNENSLKAHKVVLSACSSYFQKLLIENPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPERSSKEGTPTAEVTPLPPVQQSTSPIRGRTKMQRRMSGTKRRFNEQYPNNINKRTFYGRENKPQQVQSHQSQIIQTSVTADMLESNTGHDNQVCFSNLLKLPPMTNCMTVATSTEEENDCKSNIELNVLNLDQQPQSQQPPQPVLHENGHGTPHATPHGTPHGTPHGTPHGTPHGTPHGTPHGTPHSQHESRLVMTSPAPIMSTTHTPPTNMQPHTLQPMTNCMTVATSTDEENDCKSNIELSVLSLDNPQQGPQPQQPQPQQAQGVQHDSTSLMSLDGQGPQSQQPTPQPVPHDDQNHNHGHGHSTPQPQPQLHSQENRVVMTSPALIMSTTLTPLTTIQPTFSVLQNPPGGEDEHTMHTMMITPELLGLIPSSSDVSNDSKSGIVTSGTICNKAWTQEDMDMALEALRNHNMSLTKASITYGIPSTTLWQRAHRMGIDTPKKDGPNKSWNEDILNVALEALRNGSISANKASKAYGIPSSTLYKIARREGIRLAQPFNAAPTTWNPDDLERALDAIRSGQTTVQRAATEYGIPSGTLYGRCKREGIELSRSNPTPWSEDAMLEALEAVRMGQMSINQAAIHYNLPYSSLYGRFKRGKYEADHPDQINVDSSSPPAQQQQTLSPMYFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00201805;
- 90% Identity
- iTF_00201805;
- 80% Identity
- iTF_00201805;