Basic Information

Gene Symbol
Zmiz1
Assembly
GCA_010883055.1
Location
NC:37497884-37515745[-]

Transcription Factor Domain

TF Family
zf-MIZ
Domain
zf-MIZ domain
PFAM
PF02891
TF Group
Zinc-Coordinating Group
Description
This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.12 8.6e+02 -0.5 0.5 4 24 493 513 490 518 0.89
2 2 4.4e-24 3.1e-20 71.4 5.4 1 49 573 621 573 622 0.97

Sequence Information

Coding Sequence
ATGGTGGCAGCTGCCACTTCTACGGCCACCGCTACTGCTAGCGTGGTGGCCATGCAGGACCGCCAAGATATCCCCACTCAGTTCAATCAGAAGTTCTATAACGAGTCGCCAAATCTAATGCGCTTGTCGCAGATGCAGAGCCAACATGGCATCTCCCACCAATCGTACAGTTCGGGGTACGGTCAGAGAGGACCAATGACGGGCATGGGGCCAATCGGAATGAATACTTTTAATAATATGGGCTCGATGGGTCAAATGCACtctatgaattctatgaattcgatAAATTCCATGAGCAGTATGAATTCTATGAATCCAATGGCTATGGGAGGTATGAACAGCATGAACAGTATAAGCGGGATGAATGGAATGAACGGAATGACGCAGATGAATTCGATCAACTCCATGAGCGCGATGAGTAATATGGGAAACATGGGAATGAGTAACGTAATGGGGCCTAATACGATCCAAATGAACAAAATCAACATGCAGGTTCAGCAGCAACAACAGCACCAACAACATCAACACCAACAACAGCAGCAGCAACAGCAGCAGCAAGGTTATCCAAGAAGATTGACTCCTTACCCGAATCCGGCAATGCACATGGCACAAAAGAGACAACAGGGACCCTACACAAATATGCCCACTGGACCAAATCCTGCAACTATGCAACCGAGTTTCAACAACATGCCCACGAACCAAGTACCCCAATATCCCAGCAGTTATCCTCCCACGAGACCAAACTTTCAACAGCAGTATCCACCAGTTCAGGCCATCAATTCCGCGACAACTGGATTTGTTCCCAATCCTATGATCAGAACCGCCAGCATCAGACAAACTACTCCATCTTACAATGCTCCTTCCCAACCCAACCAATATTACAGCGCCAGTGTACCTGTCAGTATGGGACCGACCACTGTCGGCAACCAGTTTGTTGGTCACCAAACGAATGCAGGATATGGAGCTCCCTCGTCGTACGTGGCCACCAGCCAGTACCAACAGGAAGTCGCCTCGCCGATGAGAACAACGCCAGCGGGAAACATGAACTACCAGCATAGTCCCGTTCCTGGAAATCCAACACCTCCTCTAACTCCTGCCGCTAGTATACCTCCCTACATTAGTCCAAACTCCGACATTAAACCACCTAACTTCAACGAACTTAAAACACCAGTCAGTATGCAGAAAGACGACGAATTAAGATTAACATTCCCCGTGAGAGACGGCATCATTCTTCAACCGTTTCGACTGGAGCACAATTTGGCTGTAAGCAACCACGTATTCCACCTCAAGCAGACTGTTCATCAAACCTTGATGTGGCGGTCGGATCTCGAATTACAACTTAAGTGTTTCCACCACGAAGATCGGCAAATGAGTACAAACTGGCCTGGCAGTGTACAAGTTTCCGTCAATGCAACCCCGCTCATGATCGATAGGGGTGAACAAAAAGTCTCGCATAAGCCCCTTTACCTCAAGGATGTCTGCCAAGCGGGTCGAAACACCGTTCAAATCACGGTGTCGGCGTGCTGCTGTTCGCATCTATTCGTCCTCCAATTGGTACACCGACCGAGTGTACGAAGCGTATTACAAGGACTCTTACGCAAAAGACTGCTTACAGCCGAGCActgtattacaaaaataaaaaggaacttTAGCAACACGATGTCCAACAACGGAATAAAAACGGAAGCAGACGTCATAGAACAAACAGCACTAAAGGTATCACTCAAATGTCCTATTAGTCACAAACGGATCACATTACCAGCGAGGGGTCATGACTGTAAACACATCCAATGCTTCGATCTGGAATCGTATCTGCAACTAAACTGTGAACGGGGTTCGTGGAGGTGCTCAGTCTGCATGAAACCAGCCCAGTTGGAGGGATTAGAAGTAGATCAATACATGTGGGGCATTTTAAACACAACTTCAAGTACGCCGGACGTGGAAGAAGTAACAATAGACTCGGCAGCTAATTGGAAGCCAGCTAagattttaaatagtataaatataaaGTCAGAGGATGATGGTGACTGCAAGAGAATGATCAAGGCAATGTCACCGGGTAGTATGAATATGCCGACTATGAACAGTTGGGACATGAATCAGGCGATGAGTCCTTACATACCTCCCGATATGAATAGTATTGTTAGCGGTTCAATGATGAACAACACACCTCCTAACTATGGAAACAATAATATCAATCATCGAAACTCATCTGGAGGATCTTACGATATCAACTCGGGCACGAATCCTGCCGGAAATACGGATTATGTCAGTGGAACGGGACCTCTGAGTCATCTCAATGATTCCGTCAACTCTTTGGATCCCCTCAATGCCATGGAAAAGTCGCTAAACGATCAGATGCCGCACACACCTCATACGCCACACACACCGCATACTCCTCACACTCCGGGCGGAGGAAATAGTGGACCTCCTAGTGTTCCACCTTCGTCGCAAGAGTCCAATCACAACACATCTGGCAACACGactacaaatattaataatgacTCAGCAGACATACCTTCGGATCTTAATTTCGATCCCGCTGCAGTCATTGATGGCGAGGGAACAGGACAGGAAGCGTTAAACttGCTACCAGACGACGTAGTAGATCCAATGGAACTTCTCTCCTACCTAGATCCACCAGACCTAAACACTCCACCAAGCAGTGGAGCCAGTAGCGGAAATCCATCGTCGAGTGACGACATCTTAGCACTCTTTGAGTAA
Protein Sequence
MVAAATSTATATASVVAMQDRQDIPTQFNQKFYNESPNLMRLSQMQSQHGISHQSYSSGYGQRGPMTGMGPIGMNTFNNMGSMGQMHSMNSMNSINSMSSMNSMNPMAMGGMNSMNSISGMNGMNGMTQMNSINSMSAMSNMGNMGMSNVMGPNTIQMNKINMQVQQQQQHQQHQHQQQQQQQQQQGYPRRLTPYPNPAMHMAQKRQQGPYTNMPTGPNPATMQPSFNNMPTNQVPQYPSSYPPTRPNFQQQYPPVQAINSATTGFVPNPMIRTASIRQTTPSYNAPSQPNQYYSASVPVSMGPTTVGNQFVGHQTNAGYGAPSSYVATSQYQQEVASPMRTTPAGNMNYQHSPVPGNPTPPLTPAASIPPYISPNSDIKPPNFNELKTPVSMQKDDELRLTFPVRDGIILQPFRLEHNLAVSNHVFHLKQTVHQTLMWRSDLELQLKCFHHEDRQMSTNWPGSVQVSVNATPLMIDRGEQKVSHKPLYLKDVCQAGRNTVQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTAEHCITKIKRNFSNTMSNNGIKTEADVIEQTALKVSLKCPISHKRITLPARGHDCKHIQCFDLESYLQLNCERGSWRCSVCMKPAQLEGLEVDQYMWGILNTTSSTPDVEEVTIDSAANWKPAKILNSINIKSEDDGDCKRMIKAMSPGSMNMPTMNSWDMNQAMSPYIPPDMNSIVSGSMMNNTPPNYGNNNINHRNSSGGSYDINSGTNPAGNTDYVSGTGPLSHLNDSVNSLDPLNAMEKSLNDQMPHTPHTPHTPHTPHTPGGGNSGPPSVPPSSQESNHNTSGNTTTNINNDSADIPSDLNFDPAAVIDGEGTGQEALNLLPDDVVDPMELLSYLDPPDLNTPPSSGASSGNPSSSDDILALFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00461239;
90% Identity
iTF_01393173;
80% Identity
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