Btre010494.1
Basic Information
- Insect
- Belonocnema treatae
- Gene Symbol
- -
- Assembly
- GCA_010883055.1
- Location
- NC:112067823-112090045[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.15 5.8 7.2 3.6 1 23 20 42 20 42 0.97 2 12 1.4e-07 5.6e-06 26.2 0.8 1 23 217 239 217 239 0.98 3 12 0.19 7.3 6.9 3.7 1 23 264 287 264 287 0.94 4 12 0.26 10 6.5 0.4 1 23 293 317 293 317 0.97 5 12 1.6e-05 0.00063 19.7 0.6 1 23 322 344 322 344 0.96 6 12 0.00091 0.036 14.2 4.5 1 23 356 380 356 380 0.91 7 12 1e-05 0.00041 20.3 3.6 1 23 382 404 382 404 0.98 8 12 1.1e-05 0.00044 20.2 0.3 1 23 410 432 410 432 0.95 9 12 0.0001 0.0039 17.2 2.9 1 23 438 460 438 460 0.99 10 12 0.0014 0.053 13.7 0.4 2 23 467 493 466 493 0.90 11 12 1.5 60 4.1 6.8 1 21 499 518 499 522 0.80 12 12 8.1 3.2e+02 1.8 1.1 2 20 525 543 524 545 0.91
Sequence Information
- Coding Sequence
- ATGGCCCAATCTATCTTCGACGCTTTAACAGcAATTGATCAGGAGGAAGAGGATATATTTCAGTGCGGCAAGTGTAAAAGTCAATTCACGTCGCTGCACTTGTTTATATTACATAAGCAAGAACATCTCAAAGTACAAGAGCAAACAGTAGATATTAGTCAGTATTTAGTAACTAACGCCACTCAAGTGGTATCTGCGGAAAATGCGTGTCAGGGTGGAACGCAATATCATCCTCAAGAGACATTTGATCAATCAGATCAACTCAACGAACCAATTGTTCTCGCAGGAAGCGATATGTTGTTCagTATGGACCAGGAGGGCACGAGTTACTTAGCGTCCGATACCACCTTCAGCGTGCCGATTATTTTGAACTCTGAGAGTTTAGACTCCTTCGGAAATCCTTCGGGTCATTCAGATTCCGACCCGTTGCACATGGAATCGAATAATGTGCAACAAATGGAGAATAAAGTCTCTCTGAATGCGGACTTTACAACTTCAAATGTTTATCGTACTTTTCCGACTGAAATTCCTGTTGCTGATCAGGATGATAATCAAGATAATAATTCAACTGAGAACGAGAGTCAAGCTTCACAAAAATTAAAGTTTTACTGGCAGCAACACGAACGCTCGCACACTGGAGAGAAACCATATCAATGCGTAGTTTGCGGTCGTTCATTCGCACAAAAATCTAATGTTAAGAAACACATGTCTTCACACAAAGTGTGGCCTGGAACAGCCATACATTCCCTCCCACCTGATGTTCCAACGGACGGAAACATCGATACAACGTACCACTGTCAATTTTGCAAAGAGATATTCGATTCATACAAAGCGTTAAAGGGACATCTGATCTTATGCCACCTGAAATTAAAAGTGTACAAATGTGTCCAGTTTGGATGCAACATGATGTTTCAAGAATTGGAGGATTTTTTAGATCACACTCGCGGCCATAAGAGATCGGAATATCGATGTCATGTTTGTGGACAAGTTTTTAGTACCCTCTCCGAATTAGGACTGCATCAATACGCTCATTCCATAAAAAAGCAGAAAACAACCGAGAAGTACTACTGCTGTACTATTTGTAAATCATCTTTTTCCAATTTGGAATCATTGAATCATCATATGGATACAACGACACATGATTACCCTTGCCAGCATTGTGGAAAGAGCTTCTATGTTGAGAGATTCTTACGACGCCATTTGAAAACACACGCATCGGCGGCTCGGTTCGCTTGCGAAGATTGTGGGAAGGCCTTCAAGACCGAGCAGTATCTTACGAATCATAAAGTCATTCATAGCGATGCAACACCCTACAAATGTACGTTTTGTCtggcaaaattcaaaagaaaagatCGTCTCCGTCGCCATATGCTGATTCATGACTTGACAAAAAGACTAAAGTGCCCTTATCGGAATTATGTGGGATGCATGAGAGAATTTTCCCGCCCGGACAAATTGAAACGTCACCTTCTCACGCACAGTCATATTAAACGCTTCAGATGTAATCTATGTAGCAAAAACTTTCACCGGTCCCAGGCTCACCGACATCACGAAATCAACAAGCACTGTTTAAAGTGCGAAGTGTGTTTACTCGAATGCAGAAATTCCGAAGAGATCTTGAATCATACTTGCGAGCCGATAATCGAAGACAGTCCCAAAGTACAGAATCTCAAGACGGGAGCCAAGAATTCCAAATCACGAAAAGTGGCCGCGAAacggaaaaataattcaaaacgagTTCGCGCGAAGGGAAATAGGCAGAAAAAAGTGGAGAAACCCGTAGAGAGTGATGATGAACAAATAGTGGATTATTCGGACGACGTGGACGAAGAAATTTGTGAATTAGTAAGTGATTCGTCCTGCAATTCTTTCGAggagaaaatggaattattatcaGAGAACGATTTAAATGTTGAATCTATGGCTTCCGCAACGATGGATGTGAGAGACGAGCTTGGGATCTCCAAGTTAGAAATGGAAAGAAAAAAGAGCTTCTCctcttaa
- Protein Sequence
- MAQSIFDALTAIDQEEEDIFQCGKCKSQFTSLHLFILHKQEHLKVQEQTVDISQYLVTNATQVVSAENACQGGTQYHPQETFDQSDQLNEPIVLAGSDMLFSMDQEGTSYLASDTTFSVPIILNSESLDSFGNPSGHSDSDPLHMESNNVQQMENKVSLNADFTTSNVYRTFPTEIPVADQDDNQDNNSTENESQASQKLKFYWQQHERSHTGEKPYQCVVCGRSFAQKSNVKKHMSSHKVWPGTAIHSLPPDVPTDGNIDTTYHCQFCKEIFDSYKALKGHLILCHLKLKVYKCVQFGCNMMFQELEDFLDHTRGHKRSEYRCHVCGQVFSTLSELGLHQYAHSIKKQKTTEKYYCCTICKSSFSNLESLNHHMDTTTHDYPCQHCGKSFYVERFLRRHLKTHASAARFACEDCGKAFKTEQYLTNHKVIHSDATPYKCTFCLAKFKRKDRLRRHMLIHDLTKRLKCPYRNYVGCMREFSRPDKLKRHLLTHSHIKRFRCNLCSKNFHRSQAHRHHEINKHCLKCEVCLLECRNSEEILNHTCEPIIEDSPKVQNLKTGAKNSKSRKVAAKRKNNSKRVRAKGNRQKKVEKPVESDDEQIVDYSDDVDEEICELVSDSSCNSFEEKMELLSENDLNVESMASATMDVRDELGISKLEMERKKSFSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00089831;
- 90% Identity
- -
- 80% Identity
- -