Btre005863.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Belonocnema treatae
Gene Symbol
-
Assembly
GCA_010883055.1
Location
NC:95310399-95338466[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.99 39 4.6 0.1 1 23 348 370 348 370 0.92
2 16 6.4 2.5e+02 2.1 1.2 1 10 383 392 383 405 0.70
3 16 0.16 6.2 7.1 0.2 2 23 413 435 413 435 0.92
4 16 4.5e-05 0.0018 18.3 1.2 1 23 441 463 441 463 0.98
5 16 0.0075 0.29 11.3 2.9 1 23 469 491 469 491 0.98
6 16 3.7e-07 1.5e-05 24.9 1.9 1 23 497 519 497 519 0.99
7 16 0.13 5.2 7.4 6.6 1 23 569 591 569 591 0.98
8 16 0.036 1.4 9.2 0.1 1 23 597 619 597 619 0.94
9 16 0.25 9.9 6.5 1.2 1 21 637 657 637 658 0.92
10 16 0.67 26 5.2 0.8 2 22 666 686 665 686 0.88
11 16 0.0017 0.068 13.3 1.3 2 23 694 715 693 715 0.93
12 16 1.1e-05 0.00043 20.2 3.8 1 23 724 746 724 746 0.97
13 16 0.032 1.3 9.3 1.9 1 23 752 774 752 774 0.98
14 16 3.3e-06 0.00013 21.9 0.5 1 23 780 802 780 802 0.98
15 16 0.00084 0.033 14.3 0.2 1 23 808 830 808 830 0.98
16 16 5.2e-05 0.002 18.1 2.3 1 23 836 859 836 859 0.96

Sequence Information

Coding Sequence
atgaatATTTCAATGAGAGATTCAAGTggtgaattaattgaaattcttatAAAAGATGCAAATGCTTGCAAACGAATGCAACTTGAGAAtggaataaaaaacaattttgcaaatCCACCTGAAGCTAATCAAACTCTTTACAACATTATTTCGTCTTTATCGGGGATAGATGAAGGGAAGTTAGTTTTGGATAATGAAGATTCAAATGCCTCTCAAgttgattttcttgaattatcaAATTTGGAAACACTCCCAGACGATGGAGTTACAATTACAGAATTTGTAAATAATCTTgacaataatgataataattaccTGAAAGAGTACCTACACTCGAACAATATTGAAATAATGGAAGAATATCAGTTTCTGGATGGCAAGGAATTAGATGACAAGATTGAAacatctgaaaaattaattgtcactAATGATATCTCCTCGCCCCTTTGTCGACTTTGTGCCCGCCAAAGTGACGAAATGTTCTTCATTTTTGGATTACTTCCAAAAGAAACAAGCATAGCAGAAAAAATAAACAACTACTTACCGATTaaaGTCGAAAAGACCGACACCTTTCCAAAGAAGATCTGCCTCCCTTGCCTTGAAAAACTAGATCTAATTGacaattttcacaaaacagtttcCGAATCAGaagcaaattttctaaaaactaaaaagaaaatttcaggaaaaaaaaccGAACCTCTTGTTGAAAAGAGACCTCCAAAATCGCTCATTTCTGCATCACCAGCgaaaaaatctttcgaaactgAAGCTCTTGATCCTGAAAATCTCTATGACAAAGTCCTGAATGAGGATGATTTTGAGATGATTGAGGAGAGCGAAGAAGAGAATGCAGTGCAAGAAGATGACTCCGTTGGCCCaaaaaatttgagcaaaaatttagaaaaagatcaTTCTAACGAAGCCAGTGAAGTTTCTTCAAGTACGATTGAACCAATAAAATGTCGTGTTTGTGAAGCGAAATTTTATACGATGAGGAAATGTTATCTTCACTCAGCCTCTCATTCTTCATCGAATTATTATCCCTGTAGCCTTTGTGATACAGATTCGCCAAGTCCGGAAAAATGGAGGGAACATTTTACGGAACACAGTCCTAGTAAATTACACGATGAAAGAATCTTAAATTACGAATGCGAAATTTGTCAGAAGAAGCACGTTTCTGAGGCAAGACTGAAGTTTCATCTTCAGTTCCATGAAGCTGGTGTTAAAGCTCGTTATTGTCAAAAATGTGATAAGTTTCTTGCTTCCGAGTCAGTACTTTACAATCATTATGTGATGGTTCATATGAAGTTGAGGGATTTTTGTTGTGACATCTGCGGCAGTGTCTTCAGATCTCAACCCCAGTTGGATGTCCACCAGCGAAAACATAAAAATGAGAGACCTTACGAGTGTCAATTTTGCTCTAAACGATTTTTATCCATGGATAGTCTCCGGAGACACAGAAAACTTCACCTTCCTGATAAACTTTTTCAGTGCAAGCAGTGTGGAAAGCGATTTAATCGAGCAAATTCCCTGACAAACCATCTTCTCACTCATCAAGTCGAAGCCAAACAGTCTATGATCTGTCAGTTCTGCGATGCGTGTAATGAAGTTTTTCTTGATGTTTCTGAAGCTGAATCTCATATTCAAGTCTGCAAATCAAGCGATTCGCCTAAGATTGAAGAGAAAAGTCTCAATGCTATCTACAGATGCGAGTTCTGCCAACGTTGTTTCACCTCCATTAAGTTTGCAAAGACTCATAGAAAATCTCACTCTGGTCCCACGCCTTTTATCTGCACAATTTGCAATGTGGCCTACGCAACTTATAATCAAGTACAAGCACACAAAAGCGCGCACAGAAAATCTTCTCAAAATCTTCGCTCAAAGGAAACCACAAtcacaaaattcttcttttgcgaATATTGTGAGAAGGAATTTCTGCAGTTCACCAACATGAATGTTCATCGAAAATCGTGTGTCAAGACGAAAAACTGGACTTGTGGTTGCTGTTCTGCcgtatttccaaataattttgaattatctaaACACAAAAGAAGAAGGGACCCTGGCGAAGACTGGTCCTGTGACTATTGCGATAAGAGTTTTGCAAACTTCTGCGGTCTTATAACTCATAAAGATTTGCATACGAGAACAAACAAGAATCTGCTTTTTGCCTGCTCTATTTGCGGGAAGAACTTCCATCAAaaagctCATCTAACTATTCACACGAGAAGTCACACTGGGGAAAAGCCCTATGCCTGTGATTTGTGTGATAAGGCCTACAGTATTAAATGCGATAGAGATAATCACCGAAGGACTCACACTGGAGAACGTCCCTTCAAATGCACGATTTGTGAAAAAGCCTTTAAAAATCCAGCCAGACTTCGAGAACATATGCTAAATCATTCCGATATTCGACCCTATAAGTGCGATATTTGTGAGCAGGCTTTCAAAAAAGGCAGTGCAAAAAAAGTTCACATGCTCATTCATACTGGAGAAAAACCATTTCAATGCGATATTTGTGGTTTACATTTTCGAAGATCGGGAGATATGAAGAAACACAAAATCAGCCGGCATGAGCCAAAGCCTCAGGCTGATAAGACTGAAGTTACAGACTAA
Protein Sequence
MNISMRDSSGELIEILIKDANACKRMQLENGIKNNFANPPEANQTLYNIISSLSGIDEGKLVLDNEDSNASQVDFLELSNLETLPDDGVTITEFVNNLDNNDNNYLKEYLHSNNIEIMEEYQFLDGKELDDKIETSEKLIVTNDISSPLCRLCARQSDEMFFIFGLLPKETSIAEKINNYLPIKVEKTDTFPKKICLPCLEKLDLIDNFHKTVSESEANFLKTKKKISGKKTEPLVEKRPPKSLISASPAKKSFETEALDPENLYDKVLNEDDFEMIEESEEENAVQEDDSVGPKNLSKNLEKDHSNEASEVSSSTIEPIKCRVCEAKFYTMRKCYLHSASHSSSNYYPCSLCDTDSPSPEKWREHFTEHSPSKLHDERILNYECEICQKKHVSEARLKFHLQFHEAGVKARYCQKCDKFLASESVLYNHYVMVHMKLRDFCCDICGSVFRSQPQLDVHQRKHKNERPYECQFCSKRFLSMDSLRRHRKLHLPDKLFQCKQCGKRFNRANSLTNHLLTHQVEAKQSMICQFCDACNEVFLDVSEAESHIQVCKSSDSPKIEEKSLNAIYRCEFCQRCFTSIKFAKTHRKSHSGPTPFICTICNVAYATYNQVQAHKSAHRKSSQNLRSKETTITKFFFCEYCEKEFLQFTNMNVHRKSCVKTKNWTCGCCSAVFPNNFELSKHKRRRDPGEDWSCDYCDKSFANFCGLITHKDLHTRTNKNLLFACSICGKNFHQKAHLTIHTRSHTGEKPYACDLCDKAYSIKCDRDNHRRTHTGERPFKCTICEKAFKNPARLREHMLNHSDIRPYKCDICEQAFKKGSAKKVHMLIHTGEKPFQCDICGLHFRRSGDMKKHKISRHEPKPQADKTEVTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-