Basic Information

Insect: Belonocnema treatae
Gene Symbol: -
Assembly: GCA_010883055.1
Location: NC:100370982-100420133[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00058 0.023 14.8 1.1 1 23 326 348 326 348 0.95

2 12 1.4e-05 0.00054 19.9 1.3 1 23 353 377 353 377 0.94

3 12 0.0063 0.25 11.5 0.5 1 23 490 513 490 513 0.96

4 12 0.0052 0.2 11.8 0.1 1 23 527 550 527 550 0.91

5 12 3.7e-07 1.4e-05 24.9 3.6 1 23 556 578 556 578 0.98

6 12 7.5e-06 0.00029 20.8 1.0 1 23 584 606 584 606 0.98

7 12 0.00067 0.026 14.6 2.8 1 23 612 634 612 634 0.97

8 12 5.2e-09 2e-07 30.7 0.8 1 23 640 662 640 662 0.99

9 12 4.7e-05 0.0019 18.2 5.4 1 23 668 690 668 690 0.98

10 12 4.7 1.8e+02 2.5 5.7 2 23 697 718 696 718 0.95

11 12 1.2e-05 0.00048 20.1 2.3 1 23 724 746 724 746 0.98

12 12 3.8e-07 1.5e-05 24.8 1.5 1 23 752 774 752 774 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00058	0.023	14.8	1.1	1	23	326	348	326	348	0.95
2	12	1.4e-05	0.00054	19.9	1.3	1	23	353	377	353	377	0.94
3	12	0.0063	0.25	11.5	0.5	1	23	490	513	490	513	0.96
4	12	0.0052	0.2	11.8	0.1	1	23	527	550	527	550	0.91
5	12	3.7e-07	1.4e-05	24.9	3.6	1	23	556	578	556	578	0.98
6	12	7.5e-06	0.00029	20.8	1.0	1	23	584	606	584	606	0.98
7	12	0.00067	0.026	14.6	2.8	1	23	612	634	612	634	0.97
8	12	5.2e-09	2e-07	30.7	0.8	1	23	640	662	640	662	0.99
9	12	4.7e-05	0.0019	18.2	5.4	1	23	668	690	668	690	0.98
10	12	4.7	1.8e+02	2.5	5.7	2	23	697	718	696	718	0.95
11	12	1.2e-05	0.00048	20.1	2.3	1	23	724	746	724	746	0.98
12	12	3.8e-07	1.5e-05	24.8	1.5	1	23	752	774	752	774	0.98

Sequence Information

Coding Sequence: atgcTCGTTATGGAGCAGCAAGTTTCTTTATATGAATCGACAATTTGTCGATTATGTGCCGAGAGCAATGGAAGCGGAGAACCTCTTTTTCCCGAAGATACAGAGAGACCGGATTTAAGTACGATGATTAATCGCTACTTGCCACTCAAGATTCAAAATGATGGCAAACTACCGCAAACGATTTGCCCTGGTTGCAATATTCAATTGGAGTCAACGATCCAGTTTTTTGACTTGGTGGCGGAAGGTCAGAAAAAAATTCGTGACCTCTGGAAGCATCAAGTCGACCTGGAACGAAAATCTAAACGCGAAATTGAGCGTTTAAGGCGAGATGATTCTGATTTAACGACTGAACCAATGGAAACTATTGAAGGGGCAGAAATTGCAGAGAATCCTGAAAATGTTGATAATATTGAGAATGCTGAGGCTTTAGGAATGGAAACTCCCGAGGAGAATGGAGAAGATGATAATCTCGAAGGACAAATTTatataaacaTAATGCCCGACGGTTCTATGTACACCTCCGATCATGAAATAAGACTGCAAATGGAAGGATTAGAGAAGCCGAGAAGAAAAAGGGGACGTCCTCCAAAAATTGAACCCaagACCGAAGCTGTGGACGAAATTCCGGAAGAAACGAGTCAGGGTGAAGATGAAAAACAGGAGGAAGATATCGAAGAAGAGGACGATGGAAGCGGAAGGCGTCGCAGAAAACGAAAAATCCCGGAGAGatttaagGAAGCCGTGCAAGGAAAGGAGCTCGATAGAATATTCAAAGAAGAAGGTGTCTACGACGAAGGGGACTTTGATTATGAAGATGACTATTTCGATGACgctgatgaatttaaaactctGACTACTCCCGACGGCAATGAAATTATCGGGCATTTAGAGACTGAGGAAGGAAAGGACTTGGGCGAGTTGGTCGTCATAAATCGAAACCGAGGTCGAGGCAGACCTCGAAGAAagaagaacaaatatttttgcaatGTTTGCGGGAAAGGATTCAACCAACTTAGCAGATATACTGCCCATAAGAGtcttcacaaaaatataaaatataaatgcctAGAATGTGGCAAACAGTTTTCGAACGAAGATAATTTCCTTCTCCATCAAAAGACAACTTCTCATGCCGGTCGCGAGATTGTCGACGTTTTGAAGGAAGAAGTTTGCAAGCCTGAATACATTCTCCCATCTGCAGATCCTCTCTCAACTCCTACTGAACCAATTTCGGCAGAAAATATTTTCGCAAACGCCGAGAAAGCAGAGCATGGAAATACAGAAACGACTCCAATAGAAGAATCTCAATCTGAGAAAAATCTACCTGAAGAAAATCCCTCCGGAGAAAGTCCTGTTGAAGAAAATCCCTCTGAAGAAAATCCCGCTGAGGAAAATCCCGCCGAAGATAATCCCTCGGAAGAAAATCCCTCGGAGGAAAATCTTTCTGAAGAAAATGGAGAGAATTCATTTAATTGCGATCAGTGTCGTCGATCTTTTCCCTCCGAAGAATCTAGGGAAACGCACCTAAAAATTGATCACAATAGTGATAAACAAATGAATTCCAAATGTGACAAAGGATTTCCGTGTGATATTTGCGGAAAAGTACTTAATCATCCGAGTTCGATTTTGTATCACCGAGAGGCGGAGCACAATAATGGAAGGcgatttgtttgcaacaaatgtGGAAAGAGTTTCAAACATAAACAACTTTTACAGCGGCATCAACTTGTCCATTCGGAAGAACGTCCCTATATTTGTAAATCGTGCAATGCGAGTTTTAAAACGAAAGCGAATCTTATCAATCATCAGTCGACACACACTggagagaaaaaatatttctgcgaTATTTGCAGCCAGCAATTCGCTCACAAAACAAGTCTCACTTTGCATTACAGGTGGCACTCGGGCCATAAACCCTACCAGTGTAACGTCTGCAACAAAAGCTTCTCCCAGAACGGAAATCTCCAGGAACACATGCGGATTCACACTGGAGAAAAGCCCTATTGCTGTGAAACTTGTGGTCGAAAATTTACAACATCTTCTCAATTTAAACTCCACGTTAAACGTCACACGGGCGTAAGACCCTGGAAatgtgaattttgtgaaaaaagctTTTTGCACAAAGACACCTGGAAGTGTCACGTTCGCCGACACAACAATGAAAGACCCTTTCAATGTTCACATTGTAGTCGCGCGTTTACGGAACAGTGGGCTTTGAAAAAACATCTTCGTTTGCATACTGgagAGAAACCTTATTCCTGCGAAGTATGTGGAAAGGCATTTGCAGattgttcaaatttaacaaaacataaaaagGTGCATAAGGAAAATAATAAAGCGGCTGAAGTTAATGAGATACCGGAAACAACAGTTTGGCAGATTGTGCCAAATGCACAAGGAGTGAGCGATAATTCAATTGGAGATCGAATTACTGAAGTAATAGCGGCTGATAACGTTTCGGGAGATGAAGTTCAGCAGATTTATTACGTCGCTTATCAAGGTCAGGATATAATCGAGCAGCCGAGGATGCTACAATTCaTCGATTCTTCTGAAATGATAGAACTCAGAGAAGATTTAGCGACCGTTGGAGGTGAAACTCTGCGTGCAATTCGAATAGAAGAAGATGATATTATTACTGAAGAATCATTAGTTGAAGCTCAGGAAAGTGACGGAAATCTCGAGGAGGAGATTGCTGAGTCAGAGTTACAAGTTcagatCACGGACAATGAAGGAAATGTGATTCCTCTGACAATGCAACACGCACAACAACTTGTTGACGGTCAAGTTGTTGTCACCCAAGGACGTGACGGTCAATTAGTGAAAGTGAATTATTCTGGATTCAGACAGCAGAATTTGTTTGCTCAGTTAGGCCTAAATATGAATCAAGACGGAAATACTAATCCCGCGGCTGTTATCAAAGGAAGAAAAAATTCGACAGCAtcaagaaattctgaaaaaagtgctgaaagaaaaatttctaaagtttag
Protein Sequence: MLVMEQQVSLYESTICRLCAESNGSGEPLFPEDTERPDLSTMINRYLPLKIQNDGKLPQTICPGCNIQLESTIQFFDLVAEGQKKIRDLWKHQVDLERKSKREIERLRRDDSDLTTEPMETIEGAEIAENPENVDNIENAEALGMETPEENGEDDNLEGQIYINIMPDGSMYTSDHEIRLQMEGLEKPRRKRGRPPKIEPKTEAVDEIPEETSQGEDEKQEEDIEEEDDGSGRRRRKRKIPERFKEAVQGKELDRIFKEEGVYDEGDFDYEDDYFDDADEFKTLTTPDGNEIIGHLETEEGKDLGELVVINRNRGRGRPRRKKNKYFCNVCGKGFNQLSRYTAHKSLHKNIKYKCLECGKQFSNEDNFLLHQKTTSHAGREIVDVLKEEVCKPEYILPSADPLSTPTEPISAENIFANAEKAEHGNTETTPIEESQSEKNLPEENPSGESPVEENPSEENPAEENPAEDNPSEENPSEENLSEENGENSFNCDQCRRSFPSEESRETHLKIDHNSDKQMNSKCDKGFPCDICGKVLNHPSSILYHREAEHNNGRRFVCNKCGKSFKHKQLLQRHQLVHSEERPYICKSCNASFKTKANLINHQSTHTGEKKYFCDICSQQFAHKTSLTLHYRWHSGHKPYQCNVCNKSFSQNGNLQEHMRIHTGEKPYCCETCGRKFTTSSQFKLHVKRHTGVRPWKCEFCEKSFLHKDTWKCHVRRHNNERPFQCSHCSRAFTEQWALKKHLRLHTGEKPYSCEVCGKAFADCSNLTKHKKVHKENNKAAEVNEIPETTVWQIVPNAQGVSDNSIGDRITEVIAADNVSGDEVQQIYYVAYQGQDIIEQPRMLQFIDSSEMIELREDLATVGGETLRAIRIEEDDIITEESLVEAQESDGNLEEEIAESELQVQITDNEGNVIPLTMQHAQQLVDGQVVVTQGRDGQLVKVNYSGFRQQNLFAQLGLNMNQDGNTNPAAVIKGRKNSTASRNSEKSAERKISKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00980360;
90% Identity: iTF_00011378;
80% Identity: -