Btre000123.1
Basic Information
- Insect
- Belonocnema treatae
- Gene Symbol
- -
- Assembly
- GCA_010883055.1
- Location
- NC:96842348-96853966[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.042 1.7 8.9 2.1 1 23 453 475 453 475 0.97 2 17 0.096 3.8 7.8 1.8 2 23 533 554 532 554 0.95 3 17 0.00015 0.0057 16.7 3.4 1 23 610 632 610 632 0.97 4 17 1.6 61 4.0 1.0 2 23 636 657 635 657 0.94 5 17 0.00095 0.037 14.1 0.8 1 21 718 738 718 742 0.92 6 17 0.0043 0.17 12.1 3.6 2 23 810 831 809 831 0.95 7 17 6.5e-05 0.0025 17.8 3.8 1 23 880 902 880 902 0.97 8 17 0.00086 0.034 14.3 1.1 1 20 907 926 907 928 0.94 9 17 0.075 2.9 8.2 0.3 2 23 939 960 939 960 0.97 10 17 4.6e-05 0.0018 18.3 0.6 2 23 999 1020 998 1020 0.97 11 17 4.2e-05 0.0016 18.4 1.6 1 23 1025 1047 1025 1047 0.95 12 17 0.00017 0.0067 16.5 2.8 1 23 1053 1075 1053 1075 0.98 13 17 7.4e-06 0.00029 20.8 0.4 1 23 1091 1113 1091 1113 0.95 14 17 6e-07 2.3e-05 24.2 0.6 1 23 1119 1141 1119 1141 0.99 15 17 1.6e-05 0.00062 19.7 0.2 1 23 1147 1169 1147 1169 0.98 16 17 0.0012 0.048 13.8 4.2 1 23 1175 1197 1175 1197 0.96 17 17 0.017 0.67 10.2 0.4 1 20 1203 1222 1203 1224 0.89
Sequence Information
- Coding Sequence
- ATGGACGCCATAGAGATAAATACGTCGGAGCCAACGCAAAATGAGGAGGGTATCGTATCTGCGATGGAAATATGCCGTGTTTGCCTGCTTGGAAATGTTGTGATGCGAGACCTCTTCCATGAGAGTGAGGTCAATTCTTTATCCGCTAAGGCCATGAGCTTCGCCAGTGTTAAGATGATACCAGGTGACGGTCTACCGGGACAAGTGTGTTGTGTTTGTGCAGACAAACTGGAATCAGCATACGACTTTAAATTGCAAGTCGAACAAGCCGACAGTGTCCTAAGAGAAAAATATGATACACTTAACATTAAAGAAGAACTATTTTTCAACGATGTCGAAGTTCATTTGGAAGGAGAGAGAACTCGGACGAGGCGTGAAATAAATGACAATGGTGAATATGTGGAAACAACTGAATCACTGCACGATGTTGGCAGAGATACACTTTTGAAGGATCATCTCGCTCTTTTACAAGTCCAAAAAATGGCAGAACAAGAAAGCATGTTGCAAGAagGTTTTTGTTCAGATGTAGAACACTTGCAAGAACATCTTCAAGAAGACTTGCAAGAGGAACACCTACACGAGGAACATTTACAAGAAGAGCACTTACAAGAGGAACATTTGCAGGAGGAACATCTGCAAGAGGAAGATCTCCAAGAAGACTTGCAAGAAGAGCACTTGCAGGAGGATCATTTAAACGAGGAAGACTTGCAAGAAGAACACCTTCACGAAGATGATTTACAAGACGAGCACTTACAAGATGAGCACTTACAAGAGGAGCACTTACAAGAGGATCACTTACAAGACGAACACTTACAAGAAGAAGACCTACAAGAAGAGCATCTACAAGAAAACGAAATCGTTGGAATACACAAGGAATCCGATGAAGCAATCTTACAGTTGGAACAGATTTCGCAATCTGTGCATCACTTTGCCGATCAGAGTGACATCAAGGATGAAGGACTTCATGAAACAGAATCTGCAAACATGCAAGTGCAAACATACCTTGATCAACCAGATTGCTCTCAGATGAGCGACGATGATTTTAACAACGACGAACCCTTCGCTGCTACTCAAGAGTCTATGGAATACACGTCATCCTTAGCGAAAGAACGAGAAATAGATCAAGAACAGGATCAGGACCAATTCCAACAATCGACAGAAGACACATCTGTTGAGCAAGTAAATCTCAATTTGGAACAAGAATCGCCTCAAAGTGAAACTCGTAGAAGCAAACGCAAAATCTCTCGTCGTTCAACTACCTCTGACCACAACTCTGACGAAGAGaattatttcgaaaatctgaatcTCAGTTCACGTCTGAAGAAGACTCAGATGGATAAATCAGAGAAGGTCTTCTTCATGTGTTACCTCTGTGACAAGGAATTTCTCTccaaggaagttttaaaagaacaCATGCACTCGCACGAGGAAGTAAGAAGAACCCTTTCCTTGAAAAAGGTGGGAGACAAGCCTCAAAAGGCCACGACACTGCAGAAAATAACAGCATCACAAAAAGTAACCACGGCGCCGAAACCGTCGACACCTCTGAAATCTGCTCCTCCTATAACAATGCCACCATCGGGAAAGAAACCGAACAAATGTCCTCACTGCGGAAAAGAGTATCTCTATATAATCTCCTTTAATAAGCATCTGAAGCAACATGAAAAAGAAAACGGCGGCATGAAGAGCGAATCAATGCCACTAGAAGTTAACTTCCGCGTGGATGACGATTCTGTTGATTTTCCCGGTTACGCGAACCCTCCCGGTTCTGATGACGAAATAACTGAAACGTGCACAGATTCAGACGCAGAAGGAAAGGGGGACGAACATCAATGCAAGAAATGCCCGGAGAAATTCAACACGAAACGAGCACTTCGGAAGCACGCCATTAAACACATAAGTTTGAAATGCTCAGTTTGTGAGAAGCAATTGGACACTATGGAAAAGATGAAGGAGCACCGCACCCAACACGTGACCGAAGGTGTTTTGACGGAAGAAGATTTGAAGAAGGACCTTGAGAACTTTATAGATCTTTTGCAAGATGAGGACGAAGATGATAAAAAATCGCTCTCGAAACAAGAGACTCACAGCGGAAAGAACAGTTGTAAAATCGTACAAAAGCACTTGGAGCAGCACGGGAAAATTAAGTCCTTCAAGTGCACCCAGTGCAATAAAACTTTCGGCAACGAGCTCACATTGCGTAATCATTTGATAGCAACGAATCACAAGACCATCTTGCACGGTCAAGAGTACGATCCGAACAAGAGAATTAAACGAGTCGCGGCAAAGGCTGCACAGAAGATCATCGACAAAATCAAAATCGAGGACGAGAGTGATTATGAAGAGGAGGATACGAAAAGTAAAGATAGCAACTATCGGGAGGAATCAAAGTCGCCAGGTAAGAGagcttataataaaaaagttttggaatGCGCGACCTGTTATAAGAAGTGCAGTTCTAAGCAATCCTTGACGAAACACATGGAGCAGCATGTCAAGGATGAAAAGGGAGATAAAGACAAGATGAAACAAGATAGGTCAATGAAACAAGATCCTGACAGAACACTGGATGACGACGATGACGACGATGATCTAGATGATGATTTCGAAAGCGGTCTGGATTGGCCGATGGACACTCACGAGTGCCCCACTTGCAAGAAGAGATACAGTACCAAGAAATCTTTACTAAGGCACCAACTTTTACACGAAGAGCCGAACTTTGAGTGCGACATCTGCAACGTGAAATTCTACCGTAAGGATAAGTTAAAATCCCACTACGATAAATGTTCGGAGAAAAATCCGGACCAAGTGCGAAAGTGCAACATTTGCGGGGATagtttcgaaaataatgaaatccTGCGCGAGCATCGAGCAAAACACGTGACTGAGGGAATTTTGACGGAGGAGGATTTGAGAGAGATCGAACCTAGGCCTGAGGAAAGAAGATCGGGTGAAAAAGTTGCGAGAAAGAGAAGGACAGACATTGTGGGTCTCGAGTGTACAGAATGCAATAAACAATATACTTCTCGAAAGGGCCTCTTGCGCCATATCCAAGTCCACGAAGGCAAGAAATACCTCTGCGatatttgtccaaaaaaattctaCAGAAGGGAACACCTGAAGATTCACGTAGCCAAGCACAACATGATCAAGCCTTACAAATGTAATCGGTGTACGAAGCGTTTTATCAAAGAAGAACAGCTGACAAACCATCTGTCGAAACACGACAGAACCTTCAAGAAAAACAAGGAAACGGATAGTTCGAAGAGATTCCTCTGTGAAATCTGCTCGAAAAGTTTCACTCAGTCAACGACTTTGATTGCACATCTTAGAGCGCACAACGGAATCAAGCCTTACGTTTGCGAAGTTTGCTCGAGACCTTTCACGACAAATGCTTATCTAAAGATGCATATGAGAACGCATACGCAGGAGAGACCTTATAAATGTCAGGTCTGTAGTAAGGCTTTCGCTAGAGCTGATACCTTGGCTAATCATCTGACCTCTCACACTGGAGAGGCCAAGTACCACTGCAAATTCTGTCCGAAGAACTTCAGAAGATTGAAGTCTCTGAAGGAACACGTGTTTATCCACACGGGACAGAGACCTTACGCTTGTCCGACTTGCGATCGCAGGTTCAATAATAATGGAAGTCGATATGCGCACAGTAAAAGATGCAAACAAAACTTGCTGCAGAATCAGAGTCGGGTTCAAATTTTACCACCACCACCTCTTCAGATGCAACAGAGGATACATCAAAGCCTCGTCCAGTCGCCAATGATCAAGTCGCAAAATATTAAGACGATCACGATTGCCAGACAGGAGCCCATGACAACTCAACAGGTTCTGCAGCATCAGGAAATTCTAATGCCACTCATTTTACCCTTGACAGTGACGCTCGCCGACGTGGGGGAGGAAGTAATTCTACCGGAAGGTACCAAGATCTTCACCACATCTTAA
- Protein Sequence
- MDAIEINTSEPTQNEEGIVSAMEICRVCLLGNVVMRDLFHESEVNSLSAKAMSFASVKMIPGDGLPGQVCCVCADKLESAYDFKLQVEQADSVLREKYDTLNIKEELFFNDVEVHLEGERTRTRREINDNGEYVETTESLHDVGRDTLLKDHLALLQVQKMAEQESMLQEGFCSDVEHLQEHLQEDLQEEHLHEEHLQEEHLQEEHLQEEHLQEEDLQEDLQEEHLQEDHLNEEDLQEEHLHEDDLQDEHLQDEHLQEEHLQEDHLQDEHLQEEDLQEEHLQENEIVGIHKESDEAILQLEQISQSVHHFADQSDIKDEGLHETESANMQVQTYLDQPDCSQMSDDDFNNDEPFAATQESMEYTSSLAKEREIDQEQDQDQFQQSTEDTSVEQVNLNLEQESPQSETRRSKRKISRRSTTSDHNSDEENYFENLNLSSRLKKTQMDKSEKVFFMCYLCDKEFLSKEVLKEHMHSHEEVRRTLSLKKVGDKPQKATTLQKITASQKVTTAPKPSTPLKSAPPITMPPSGKKPNKCPHCGKEYLYIISFNKHLKQHEKENGGMKSESMPLEVNFRVDDDSVDFPGYANPPGSDDEITETCTDSDAEGKGDEHQCKKCPEKFNTKRALRKHAIKHISLKCSVCEKQLDTMEKMKEHRTQHVTEGVLTEEDLKKDLENFIDLLQDEDEDDKKSLSKQETHSGKNSCKIVQKHLEQHGKIKSFKCTQCNKTFGNELTLRNHLIATNHKTILHGQEYDPNKRIKRVAAKAAQKIIDKIKIEDESDYEEEDTKSKDSNYREESKSPGKRAYNKKVLECATCYKKCSSKQSLTKHMEQHVKDEKGDKDKMKQDRSMKQDPDRTLDDDDDDDDLDDDFESGLDWPMDTHECPTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKSHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVTEGILTEEDLREIEPRPEERRSGEKVARKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCNRCTKRFIKEEQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYKCQVCSKAFARADTLANHLTSHTGEAKYHCKFCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNLLQNQSRVQILPPPPLQMQQRIHQSLVQSPMIKSQNIKTITIARQEPMTTQQVLQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980354;
- 90% Identity
- iTF_00980354; iTF_00011375; iTF_00089816;
- 80% Identity
- -