Basic Information

Insect: Belonocnema treatae
Gene Symbol: -
Assembly: GCA_010883055.1
Location: NC:65115649-65120797[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.3e-05 0.00051 20.0 2.5 3 23 71 91 71 91 0.99

2 13 0.014 0.56 10.4 0.4 1 23 117 139 117 139 0.97

3 13 7.4e-05 0.0029 17.6 1.4 1 23 145 167 145 167 0.96

4 13 3.8e-06 0.00015 21.7 0.8 1 23 174 196 174 196 0.98

5 13 0.0057 0.22 11.7 2.4 1 23 202 224 202 224 0.98

6 13 0.00022 0.0086 16.1 0.8 1 23 230 252 230 252 0.98

7 13 5.4e-06 0.00021 21.2 2.9 1 23 258 280 258 280 0.96

8 13 0.00025 0.0098 16.0 2.0 1 23 286 308 286 308 0.97

9 13 1.4e-06 5.6e-05 23.0 1.2 1 23 315 337 315 337 0.97

10 13 2e-05 0.00076 19.4 1.4 1 23 343 365 343 365 0.98

11 13 3.8e-06 0.00015 21.7 1.7 1 23 371 393 371 393 0.98

12 13 0.00013 0.005 16.9 3.6 1 23 402 424 402 424 0.99

13 13 0.0024 0.094 12.9 8.9 1 23 430 452 430 452 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.3e-05	0.00051	20.0	2.5	3	23	71	91	71	91	0.99
2	13	0.014	0.56	10.4	0.4	1	23	117	139	117	139	0.97
3	13	7.4e-05	0.0029	17.6	1.4	1	23	145	167	145	167	0.96
4	13	3.8e-06	0.00015	21.7	0.8	1	23	174	196	174	196	0.98
5	13	0.0057	0.22	11.7	2.4	1	23	202	224	202	224	0.98
6	13	0.00022	0.0086	16.1	0.8	1	23	230	252	230	252	0.98
7	13	5.4e-06	0.00021	21.2	2.9	1	23	258	280	258	280	0.96
8	13	0.00025	0.0098	16.0	2.0	1	23	286	308	286	308	0.97
9	13	1.4e-06	5.6e-05	23.0	1.2	1	23	315	337	315	337	0.97
10	13	2e-05	0.00076	19.4	1.4	1	23	343	365	343	365	0.98
11	13	3.8e-06	0.00015	21.7	1.7	1	23	371	393	371	393	0.98
12	13	0.00013	0.005	16.9	3.6	1	23	402	424	402	424	0.99
13	13	0.0024	0.094	12.9	8.9	1	23	430	452	430	452	0.99

Sequence Information

Coding Sequence: ATGGACATCAAAGATGTAAAATGTAAGTTTGAATCAAATGACCTAGACTACGCATTTGAAGGTATCATAATTAAATCTGAGCCTCCTGAGTACGCTACAGTTGATGAAGCCAAGTGCGAAGAAGACAATAAGTTACAAACTCTCTCTAGTAAAGTGAGCGACGATACATCTATATTTAAATTACCTCCAATACCTAAAAAAAAGAACTGGTGTGATCTCtgtaaaaaagaatacaaaaatcgCGACAGTCTGAAAAGACACATAAGGAGACACATTGCAAAGCAAAAGGCTGCAAGCGAAAATATTGTAGGCAAACATATTGTAGGTAACAAAATTGGGGGGAAACTTTTCTGCTGCAACGTTTGCAATAATGGTTTTGAAACAGAAGTCGAGCTTGATATGCATATAAAAGGGCACTCAAGATACACGCCTTTCGAGTGCGATtactgtagaaaaaaattcacaaaccGTCAGAGCATGAAATTGCACATAATTGCTCATATGGCAGGTGGTGGGCCTTACAAGTGCGAGGTTTGTGCAAAAGCTTTTGTCAGGTCCTACAGTTTAAAGATACATCTGCGATTTCACTCAGAAGATAAACCCTATGAATGTAATATTTGCAAGCAGGGCTTTATAAGAAAAAATGACCATCATGCACACATGTTAATTCAcgaaaacaaaaaaccttttgtTTGTGATATTTGCAACAAGGCTTTTCTAAGGATGTCTTACCTAAATAAtcataaaaagatacatttagtAGACAAACCCCATGCTTGTAAAGTATGTGGTAAACGATTCATTAGGATACATGATCTCACTATTCATATGCGGTACCATACTGGCGAAAAGCGCTTCGAGTGtgatatttgcaacaaaaatttcaagaaatatcaaacaATGAAAGTGCACATATACTCTCATATGGGATTTGACCAAAGGCACAAATGTCCAATTTgtccaaaagaattttcaaggtcCAACTATTTAAAAGAGCATTTACAAGGACACTCGGGAAACAGACCATACGAGTGCGAATTTTGCAAGAAGACTTTTGTCAAAAGGTACAGTTTAAATTCACATGTGCTTATCCATCAAAAGACAAAAGATTTCATTTGTGAGATTTGCAACAAAGGTTTTACAAAGTCGTATTATCTAAAGTCTCATAAAAGAGTGCATGGGGGGCAACAGATCGAGAAGCCTTTCCAATGTGAATTGTGTAAAAAAGCATTTACTTGTGCAAGTAAGCTAAAGACTCATATCCGTAGTCACACTGGGGAAAAACCCTACGAGTGCGCTCtatgtaaaaaaagattcaagtACTGTCATAGTTTTAAGTCGCACCAAAGGTCACATGAAAATCCTACAACATCTCCAAATGTCGAGAGAAATTGCGAAGATGCAATGTTTCGCACGGTTTATTTGAACAGTAATAATGGTGGGAAGGAAGGCGATCCGAGTGTAGTTGAAATTGTACCAATCACTGTCCGGAACATCGATCTTAGGAATGCAGTACAAACAAACGAGGACAGTACTATGCAGGTTCAAGAGGAGTCAAGTCTTGAAAAAGCGACTGACTCTGGAAACAATCTTAGTAATAAAGTGCAAAAAAAAGAGCAGGTTGAAGAAAAGAAGAGTCTTGAAAAAGCGACTGATTCTGGAAACTCGAGTATAATTTCTGTGAAAACCGAACCTAGTGAGAGAATAGATGCACCTTTCGAAATAGAAGTTGAAGATGTAAAGGTAGAAATTGATGAAATGGAAAATGAATTTGAGGAAAGTAAGAGTTAA
Protein Sequence: MDIKDVKCKFESNDLDYAFEGIIIKSEPPEYATVDEAKCEEDNKLQTLSSKVSDDTSIFKLPPIPKKKNWCDLCKKEYKNRDSLKRHIRRHIAKQKAASENIVGKHIVGNKIGGKLFCCNVCNNGFETEVELDMHIKGHSRYTPFECDYCRKKFTNRQSMKLHIIAHMAGGGPYKCEVCAKAFVRSYSLKIHLRFHSEDKPYECNICKQGFIRKNDHHAHMLIHENKKPFVCDICNKAFLRMSYLNNHKKIHLVDKPHACKVCGKRFIRIHDLTIHMRYHTGEKRFECDICNKNFKKYQTMKVHIYSHMGFDQRHKCPICPKEFSRSNYLKEHLQGHSGNRPYECEFCKKTFVKRYSLNSHVLIHQKTKDFICEICNKGFTKSYYLKSHKRVHGGQQIEKPFQCELCKKAFTCASKLKTHIRSHTGEKPYECALCKKRFKYCHSFKSHQRSHENPTTSPNVERNCEDAMFRTVYLNSNNGGKEGDPSVVEIVPITVRNIDLRNAVQTNEDSTMQVQEESSLEKATDSGNNLSNKVQKKEQVEEKKSLEKATDSGNSSIISVKTEPSERIDAPFEIEVEDVKVEIDEMENEFEESKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -