Basic Information

Insect: Belonocnema treatae
Gene Symbol: -
Assembly: GCA_010883055.1
Location: NC:95424648-95458741[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00037 0.014 15.4 3.3 1 23 249 271 249 271 0.98

2 14 2.2e-07 8.5e-06 25.6 0.7 1 23 277 300 277 300 0.96

3 14 0.0013 0.051 13.7 0.5 1 23 306 328 306 328 0.96

4 14 3.1e-06 0.00012 22.0 1.2 1 23 334 356 334 356 0.96

5 14 6.9e-06 0.00027 20.9 1.9 3 23 364 384 364 384 0.99

6 14 0.00042 0.016 15.3 6.3 1 23 390 412 390 412 0.97

7 14 6.9e-05 0.0027 17.7 1.9 1 23 418 441 418 441 0.96

8 14 2.4e-05 0.00093 19.2 0.3 2 23 525 546 524 546 0.97

9 14 0.00025 0.0097 16.0 4.8 1 23 552 575 552 575 0.96

10 14 4.3e-05 0.0017 18.4 0.3 1 23 581 603 581 603 0.97

11 14 0.00013 0.0052 16.8 3.3 1 23 609 631 609 631 0.96

12 14 0.62 24 5.3 2.1 1 23 637 659 637 659 0.86

13 14 5.5e-06 0.00021 21.2 0.6 1 23 665 687 665 687 0.97

14 14 1.2e-05 0.00048 20.1 3.9 1 23 693 716 693 716 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00037	0.014	15.4	3.3	1	23	249	271	249	271	0.98
2	14	2.2e-07	8.5e-06	25.6	0.7	1	23	277	300	277	300	0.96
3	14	0.0013	0.051	13.7	0.5	1	23	306	328	306	328	0.96
4	14	3.1e-06	0.00012	22.0	1.2	1	23	334	356	334	356	0.96
5	14	6.9e-06	0.00027	20.9	1.9	3	23	364	384	364	384	0.99
6	14	0.00042	0.016	15.3	6.3	1	23	390	412	390	412	0.97
7	14	6.9e-05	0.0027	17.7	1.9	1	23	418	441	418	441	0.96
8	14	2.4e-05	0.00093	19.2	0.3	2	23	525	546	524	546	0.97
9	14	0.00025	0.0097	16.0	4.8	1	23	552	575	552	575	0.96
10	14	4.3e-05	0.0017	18.4	0.3	1	23	581	603	581	603	0.97
11	14	0.00013	0.0052	16.8	3.3	1	23	609	631	609	631	0.96
12	14	0.62	24	5.3	2.1	1	23	637	659	637	659	0.86
13	14	5.5e-06	0.00021	21.2	0.6	1	23	665	687	665	687	0.97
14	14	1.2e-05	0.00048	20.1	3.9	1	23	693	716	693	716	0.98

Sequence Information

Coding Sequence: atgagTACTTTCGCAAAAAAATGTAAAATGGAATCCCAAAGTTCAGATATGATATCTTCCTACGATGAAGATGAAATAGCCGAGAAGTCTAACACTGAAATCGAGGGAGAATATTTTCTAGTACCCGATATTCCTGAAAATGTCGAAGACATTCAGATCGTCGTCGAGGAAGAAACTCCATCGATATCTCAAATGTGCAGAATTTGCGCTTCCTTAAACGGCCATATGGTTCCAATTTTTAAAGGGGATGGACTGCAACacgatttatgtaaaaaaatagataaacatcTACCTATTAAAgtGAGCAAAGATGACACTTTACCTCTCCAATTATGTTATCACTGTGCCGCTACTTTGCTTGCCTGGGACGAACTTTCTGATGGTTGTTTAAAAGCCCAGAATCAACTTTTACTTCTTCAGGAACAACAAAAGCGCTCACAGGTTGAAGTAGAAAAACTTGAGGTTCTGGAAGAAACTGAGAAAGTTGAAGAAAAAGTAGTGgagGAGAACAACGAACCCAAACAGGTGAATGTACAAACCGCTGGAGGCTCAGATACAGAAAGGTCGGAACCGAATCATAAACCGAATGGATTTATCTTCGTCGAATTGGTAGAGGAGCATGAGGAAACGGGTAAAAAGTCGGGATCTAAATCCAAACGGACGCATTTACTGCACGAGGATTTCAGTCTGAGTCGACGACTTGAAATTAATGAGGTGAGATTTGTCGTCGATGGGAGAACTTACTACAAGTGTCCCGATTGTTCCAAGTGTCTGCGAAGTATCTACAATTATTTCGTCCATCGGCGAGGTCATCTTGGCGAGCGACCCTTCACTTGTCACGAGTGTGGAAAGAGTTTTCCCTCTCTCTCCGGCCTCAATCGACACGTGCGCGATGTTCATGTGGGTCTGAAGAAACACAAGTGTGACATTTGCGGAAGACCCTTTGCCTCGAAAGTTGCCAAGGACGAGCATCGACTCACACACACCGGGGAGAGGCCTTATGTCTGTGAAATCTGCGGCAAGGCCTTCACCCAGAAGGCATCTCTGCATGTGCACAAGCAATTTCACTCGGAGGATTTGTCCCATTGGTGTACGATGTGTGATCGCGGATTCAAGAGAAAGCAGGAACTGAAGAAGCACATTTTGACGCACACCGGGCAAAAGCCGTTTGCCTGTGACTTTTGTGGCAAGTGCTTTCGCAGCCAGGGCTGCATCAGTCGACACAAGAGGACTCACAGCAAGCTGAAGATTCACAATTGCAATTTGTGTGGCACTGCCTTCGCCCAAGAGCGATATCTCAAGAATCATCTTCAGACTAAACACAAGGATTGGGATTGCCAATCATCTTATTTCAACGAGTTTCTTCAACGTTTAGAAACACTAAACacttcaaaaaaaagttgtcctACACCAAAAACATCTTCCGATTCTAGAGAAGAATCTTGGACTGAAAAATTTATAAGTACAAGACTGAATCCAATAATCTCGAAGACTGAAAATGAACCAGCAGAAAAGTCGAAACTTGCAAAGAATCCTCAGAAAGGAAGTAAAAATTGCGTCGCAGATCCGCTGGAGTGTGATGAGTGTGGGAAAAAATTTCGATTACAGGAGAGTTTCCGTATACACGCGCGAATCCACACCGGTGAAAAGCCCTACACTTGTCATGTTTGCGGAAAGCAATTCAGACAGACCGGAAGTCTTTATTATCATCTGAAGCATGTGCATGGAGGTGTGAAAAATCACTCGTGTGATATTTGTGGACGAAGTTTTGCCATGAAAGCCGCCATGGAAGATCATCGAAGAATTCACACCGGAGAACGTCCCTACGTTTGTGATTCTTGCGGAAAAACGTTCAAAACTAAGGCTTCACTCTACATTCACTGCAAAACCCACACCGACGATTATCCACATCAGTGCAGTTTCTGCAAAAAAGGATTCCGCTGGAGACAACAAATGCTGGGTCATCTGACAATTCATACTGGTGTGAAAAATCACATCTGTGAGATTTGTGGAAAAGCGTTTGGGGTTAAAAATGATCTCACGCGACACAAGAGGATTCACTCGAAGGAAAAACCCTATTCTTGTCAACATTGTGGTCTCAGTTTTGCGCAAAAGAGGTATCTGAAAAGCCACGAGCGAACGAAACACAGTTGA
Protein Sequence: MSTFAKKCKMESQSSDMISSYDEDEIAEKSNTEIEGEYFLVPDIPENVEDIQIVVEEETPSISQMCRICASLNGHMVPIFKGDGLQHDLCKKIDKHLPIKVSKDDTLPLQLCYHCAATLLAWDELSDGCLKAQNQLLLLQEQQKRSQVEVEKLEVLEETEKVEEKVVEENNEPKQVNVQTAGGSDTERSEPNHKPNGFIFVELVEEHEETGKKSGSKSKRTHLLHEDFSLSRRLEINEVRFVVDGRTYYKCPDCSKCLRSIYNYFVHRRGHLGERPFTCHECGKSFPSLSGLNRHVRDVHVGLKKHKCDICGRPFASKVAKDEHRLTHTGERPYVCEICGKAFTQKASLHVHKQFHSEDLSHWCTMCDRGFKRKQELKKHILTHTGQKPFACDFCGKCFRSQGCISRHKRTHSKLKIHNCNLCGTAFAQERYLKNHLQTKHKDWDCQSSYFNEFLQRLETLNTSKKSCPTPKTSSDSREESWTEKFISTRLNPIISKTENEPAEKSKLAKNPQKGSKNCVADPLECDECGKKFRLQESFRIHARIHTGEKPYTCHVCGKQFRQTGSLYYHLKHVHGGVKNHSCDICGRSFAMKAAMEDHRRIHTGERPYVCDSCGKTFKTKASLYIHCKTHTDDYPHQCSFCKKGFRWRQQMLGHLTIHTGVKNHICEICGKAFGVKNDLTRHKRIHSKEKPYSCQHCGLSFAQKRYLKSHERTKHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -